BLASTX nr result

ID: Coptis23_contig00032043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032043
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530557.1| hypothetical protein RCOM_0303940 [Ricinus c...   149   8e-34
ref|XP_002321932.1| predicted protein [Populus trichocarpa] gi|2...   135   1e-29
ref|XP_002263918.1| PREDICTED: uncharacterized protein LOC100261...   135   2e-29
emb|CAN76723.1| hypothetical protein VITISV_042980 [Vitis vinifera]   134   3e-29
ref|XP_003544346.1| PREDICTED: uncharacterized protein LOC100805...   134   3e-29

>ref|XP_002530557.1| hypothetical protein RCOM_0303940 [Ricinus communis]
            gi|223529895|gb|EEF31825.1| hypothetical protein
            RCOM_0303940 [Ricinus communis]
          Length = 725

 Score =  149 bits (377), Expect = 8e-34
 Identities = 97/206 (47%), Positives = 125/206 (60%), Gaps = 11/206 (5%)
 Frame = +3

Query: 24   QTITXXXXXXXXXDLDFLNNGNEEKTFVNNVPTSYASLLLEDIQNFHQKNTNNNTST--F 197
            QT+          DLDF       +T +N  P SY +LLLEDIQNFHQK+TN NT+T  F
Sbjct: 476  QTVARSRSARRSRDLDF-----NPETSLNPNP-SYTALLLEDIQNFHQKSTNTNTNTPSF 529

Query: 198  TLPPCVTKACSILDAVADLNSSTTSNITSGAFSDDRSDHPSHNFSSTKAQLEKKRLEVVN 377
            ++P CVTKACSI++AVADLNS+T+SN+ S AFSD++      + ++  + L  K+LE   
Sbjct: 530  SVPACVTKACSIVEAVADLNSTTSSNL-SCAFSDEK-----RSPTTVVSNLVGKKLE-EG 582

Query: 378  KDPLFETETEVFMNNDLLEPSIHKYITVRRXXXXXXXXXXXXXXXXXXVVC--------Q 533
            KDP    E+EV +N+DL+EPS HKY+TVRR                             Q
Sbjct: 583  KDPF--VESEVLVNDDLMEPSFHKYVTVRRGGNGKGTSSVEDMDGQESSGSNSFVGSSQQ 640

Query: 534  QW-FSSSSWEPNSADSTDQWTSSSNT 608
             W +S+SSWEPNSADSTD+WTS SNT
Sbjct: 641  HWGYSTSSWEPNSADSTDRWTSRSNT 666


>ref|XP_002321932.1| predicted protein [Populus trichocarpa] gi|222868928|gb|EEF06059.1|
            predicted protein [Populus trichocarpa]
          Length = 736

 Score =  135 bits (341), Expect = 1e-29
 Identities = 95/199 (47%), Positives = 114/199 (57%), Gaps = 5/199 (2%)
 Frame = +3

Query: 24   QTITXXXXXXXXXDLDFLNNGNEEKTFVNNVPTSYASLLLEDIQNFHQKNTNNNTSTFTL 203
            QT+T         DLD        +T +N  P SY +LLLEDIQNFH KNT     +F+L
Sbjct: 495  QTLTRSRSARRSRDLDL-----NPETLLNPTP-SYTALLLEDIQNFHLKNT----PSFSL 544

Query: 204  PPCVTKACSILDAVADLNSSTTSNITSGAFSDDRSDHPSHNFSSTKAQLEKKRLEVVNKD 383
            P CVTKACSIL+AVADLNS+T+SN+ S AFS DR   P+    +    + KK  E   KD
Sbjct: 545  PACVTKACSILEAVADLNSTTSSNL-SCAFSYDRRSPPT---VAAANLVGKKPPEA--KD 598

Query: 384  PLFETETEVFMNNDLLEPSIHKYITVRRXXXXXXXXXXXXXXXXXXVV---CQQ--WFSS 548
            P    E+EV  ++DL+EPS HKY+TVRR                   V    QQ   FS+
Sbjct: 599  PF--VESEVLASDDLMEPSFHKYVTVRRAGTLCGEDMDGQESSGSDSVVGGSQQHLGFST 656

Query: 549  SSWEPNSADSTDQWTSSSN 605
            SSWEPNSADS D WTS SN
Sbjct: 657  SSWEPNSADSIDHWTSRSN 675


>ref|XP_002263918.1| PREDICTED: uncharacterized protein LOC100261489 [Vitis vinifera]
          Length = 710

 Score =  135 bits (339), Expect = 2e-29
 Identities = 93/197 (47%), Positives = 110/197 (55%), Gaps = 2/197 (1%)
 Frame = +3

Query: 24   QTITXXXXXXXXXDLDFLNNGNEEKTFVNNVPTSYASLLLEDIQNFHQKNTNNNTSTFTL 203
            Q +T         DLD        +T +N  P SY +LLLEDIQNFHQKNT   T + +L
Sbjct: 461  QALTRTRSSRRSRDLDL-----NPETLLNPTP-SYTTLLLEDIQNFHQKNTT--TPSISL 512

Query: 204  PPCVTKACSILDAVADLNSSTTSNITSGAFSDDRSD--HPSHNFSSTKAQLEKKRLEVVN 377
            P CV+KA SIL+AVADLNS T+SN  S AFSDDR +      N    K    KKRLE   
Sbjct: 513  PACVSKAHSILEAVADLNSCTSSN-PSYAFSDDRRNFTETHQNSMDDKNPAGKKRLEA-- 569

Query: 378  KDPLFETETEVFMNNDLLEPSIHKYITVRRXXXXXXXXXXXXXXXXXXVVCQQWFSSSSW 557
            KDP F  E+E+ + NDL+EPS+HKY+TV+R                            SW
Sbjct: 570  KDP-FVVESEIVVCNDLMEPSLHKYVTVKRGTIGGGGEMEEQESSGSNSFVGV-SQLHSW 627

Query: 558  EPNSADSTDQWTSSSNT 608
            EPNSADSTD WTS SNT
Sbjct: 628  EPNSADSTDCWTSRSNT 644


>emb|CAN76723.1| hypothetical protein VITISV_042980 [Vitis vinifera]
          Length = 685

 Score =  134 bits (338), Expect = 3e-29
 Identities = 93/197 (47%), Positives = 110/197 (55%), Gaps = 2/197 (1%)
 Frame = +3

Query: 24   QTITXXXXXXXXXDLDFLNNGNEEKTFVNNVPTSYASLLLEDIQNFHQKNTNNNTSTFTL 203
            Q +T         DLD        +T +N  P SY +LLLEDIQNFHQKNT   T + +L
Sbjct: 461  QALTRTRSSRRSRDLDL-----NPETLLNLTP-SYTTLLLEDIQNFHQKNTT--TPSISL 512

Query: 204  PPCVTKACSILDAVADLNSSTTSNITSGAFSDDRSD--HPSHNFSSTKAQLEKKRLEVVN 377
            P CV+KA SIL+AVADLNS T+SN  S AFSDDR +      N    K    KKRLE   
Sbjct: 513  PACVSKAHSILEAVADLNSCTSSN-PSYAFSDDRRNFTETHQNSMDDKNPAGKKRLEA-- 569

Query: 378  KDPLFETETEVFMNNDLLEPSIHKYITVRRXXXXXXXXXXXXXXXXXXVVCQQWFSSSSW 557
            KDP F  E+E+ + NDL+EPS+HKY+TV+R                            SW
Sbjct: 570  KDP-FVVESEIVVCNDLMEPSLHKYVTVKRGTIGGGGEMEEQESSGSNSFVGV-SQLHSW 627

Query: 558  EPNSADSTDQWTSSSNT 608
            EPNSADSTD WTS SNT
Sbjct: 628  EPNSADSTDCWTSRSNT 644


>ref|XP_003544346.1| PREDICTED: uncharacterized protein LOC100805280 [Glycine max]
          Length = 751

 Score =  134 bits (337), Expect = 3e-29
 Identities = 89/201 (44%), Positives = 109/201 (54%), Gaps = 9/201 (4%)
 Frame = +3

Query: 24   QTITXXXXXXXXXDLDFLNNGNEEKTFVNNVPTSYASLLLEDIQNFHQKNTNNNTSTFTL 203
            Q +T         DLD  N        V N   SYASLLLEDIQNFHQKNT    S+ +L
Sbjct: 466  QGLTRSRSSRRSRDLDISN-----PEAVVNPTNSYASLLLEDIQNFHQKNTQQQQSSISL 520

Query: 204  PPCVTKACSILDAVADLNSSTTSNITSGAFSDDRSDHPSHNFSSTKAQLEKKRLEVVNKD 383
            P C+ KACSIL+AVADLNS+T+SN T     D RS  PS    S + +   K++   NKD
Sbjct: 521  PACLNKACSILEAVADLNSTTSSNFT----EDKRS--PSTQ-QSIRDEYYGKKVASSNKD 573

Query: 384  PLFETETEVFMNNDLLEPSIHKYITVRRXXXXXXXXXXXXXXXXXXVVC------QQW-- 539
            P    E+EV +++D++EPS+HKY+TV+R                             W  
Sbjct: 574  PF--VESEVAVSDDVMEPSLHKYVTVKRGGGVVDMMEDQESSGSNSFTVSSSGQQHHWGN 631

Query: 540  -FSSSSWEPNSADSTDQWTSS 599
              S SSWEPNSADSTD WTSS
Sbjct: 632  NISCSSWEPNSADSTDCWTSS 652


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