BLASTX nr result

ID: Coptis23_contig00032033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032033
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30668.3| unnamed protein product [Vitis vinifera]              134   6e-30
ref|XP_002274664.1| PREDICTED: uncharacterized protein LOC100258...   134   6e-30
emb|CAN60202.1| hypothetical protein VITISV_036403 [Vitis vinifera]   134   6e-30
ref|XP_003552077.1| PREDICTED: uncharacterized protein LOC100810...   130   1e-28
ref|XP_003552076.1| PREDICTED: uncharacterized protein LOC100810...   129   2e-28

>emb|CBI30668.3| unnamed protein product [Vitis vinifera]
          Length = 377

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/101 (59%), Positives = 74/101 (73%), Gaps = 3/101 (2%)
 Frame = +2

Query: 44  LIIFIQQANANLMHLNKPG---RLQTSSCNVFDGSWIFDRAYPLYDSTKCPFVEREFNCQ 214
           LI+ +QQA A+    N  G   R Q SSCN+F G W+FD +YP YD++ CPF++ EF+CQ
Sbjct: 28  LILLLQQARADHQVYNVSGLRSRKQVSSCNLFQGKWVFDASYPFYDASNCPFIDPEFDCQ 87

Query: 215 KNGRPDNLYLKYKWKPNGCDLARFDGVDFLRRLKGKSIMFV 337
           K GRPD  YLKY WKP+ CDL RFDG+DFLRR +GK IMFV
Sbjct: 88  KYGRPDKQYLKYSWKPDSCDLPRFDGLDFLRRWRGKRIMFV 128


>ref|XP_002274664.1| PREDICTED: uncharacterized protein LOC100258410 [Vitis vinifera]
          Length = 409

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/101 (59%), Positives = 74/101 (73%), Gaps = 3/101 (2%)
 Frame = +2

Query: 44  LIIFIQQANANLMHLNKPG---RLQTSSCNVFDGSWIFDRAYPLYDSTKCPFVEREFNCQ 214
           LI+ +QQA A+    N  G   R Q SSCN+F G W+FD +YP YD++ CPF++ EF+CQ
Sbjct: 60  LILLLQQARADHQVYNVSGLRSRKQVSSCNLFQGKWVFDASYPFYDASNCPFIDPEFDCQ 119

Query: 215 KNGRPDNLYLKYKWKPNGCDLARFDGVDFLRRLKGKSIMFV 337
           K GRPD  YLKY WKP+ CDL RFDG+DFLRR +GK IMFV
Sbjct: 120 KYGRPDKQYLKYSWKPDSCDLPRFDGLDFLRRWRGKRIMFV 160


>emb|CAN60202.1| hypothetical protein VITISV_036403 [Vitis vinifera]
          Length = 367

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/101 (59%), Positives = 74/101 (73%), Gaps = 3/101 (2%)
 Frame = +2

Query: 44  LIIFIQQANANLMHLNKPG---RLQTSSCNVFDGSWIFDRAYPLYDSTKCPFVEREFNCQ 214
           LI+ +QQA A+    N  G   R Q SSCN+F G W+FD +YP YD++ CPF++ EF+CQ
Sbjct: 18  LILLLQQARADHQVYNVSGLRSRKQVSSCNLFQGKWVFDASYPFYDASNCPFIDPEFDCQ 77

Query: 215 KNGRPDNLYLKYKWKPNGCDLARFDGVDFLRRLKGKSIMFV 337
           K GRPD  YLKY WKP+ CDL RFDG+DFLRR +GK IMFV
Sbjct: 78  KYGRPDKQYLKYSWKPDSCDLPRFDGLDFLRRWRGKRIMFV 118


>ref|XP_003552077.1| PREDICTED: uncharacterized protein LOC100810868 [Glycine max]
          Length = 361

 Score =  130 bits (326), Expect = 1e-28
 Identities = 56/104 (53%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
 Frame = +2

Query: 29  SAIAVLIIFIQ-QANANLMHLNKPGRLQTSSCNVFDGSWIFDRAYPLYDSTKCPFVEREF 205
           S +  L + IQ   +  L H    G ++   CN+F GSW++D +YPLY++++CPF+EREF
Sbjct: 8   SVVLFLTLLIQIHGSGYLDHKQARGFVENYGCNLFQGSWVYDDSYPLYETSQCPFIEREF 67

Query: 206 NCQKNGRPDNLYLKYKWKPNGCDLARFDGVDFLRRLKGKSIMFV 337
           +CQ NGRPD  YLKY+W+P GC+L RF+G DFL RL+GKSIMFV
Sbjct: 68  DCQNNGRPDKFYLKYRWQPVGCNLTRFNGEDFLTRLRGKSIMFV 111


>ref|XP_003552076.1| PREDICTED: uncharacterized protein LOC100810342 [Glycine max]
          Length = 361

 Score =  129 bits (325), Expect = 2e-28
 Identities = 56/104 (53%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
 Frame = +2

Query: 29  SAIAVLIIFIQ-QANANLMHLNKPGRLQTSSCNVFDGSWIFDRAYPLYDSTKCPFVEREF 205
           S +  L + IQ   +  L H    G  +   CN+F GSW++D +YPLY++++CPF+EREF
Sbjct: 8   SVVLFLTLLIQIHGSGYLDHKQARGFAENYGCNLFQGSWVYDDSYPLYETSQCPFIEREF 67

Query: 206 NCQKNGRPDNLYLKYKWKPNGCDLARFDGVDFLRRLKGKSIMFV 337
           +CQ NGRPD  YLKY+W+P GC+L RF+G DFL RL+GKSIMFV
Sbjct: 68  DCQNNGRPDKFYLKYRWQPAGCNLTRFNGEDFLTRLRGKSIMFV 111


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