BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032028
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cuc...    57   2e-06
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    57   2e-06
ref|XP_002331536.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    55   8e-06

>ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cucumis sativus]
           gi|449519392|ref|XP_004166719.1| PREDICTED: F-box
           protein At3g07870-like [Cucumis sativus]
          Length = 375

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/96 (28%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
 Frame = -3

Query: 287 PGFSLIGSVNGLLCLTSVSLFYHPF*YIFNPISKEEISLPESPRYCSHSVGSGFGFDLTD 108
           P + ++GS NG LCL+     Y+   +I+NP +++ + LP+S  + +  V  G GF    
Sbjct: 90  PEYDVVGSCNGFLCLSDS--LYNENLFIYNPFTRDYLELPKSKDFSNPDVVYGIGFHPQT 147

Query: 107 DKYKVVRTLHAVQHKN-DAELHYLEAKVYTLGSGRW 3
            + K+++ +++   +      H+ E +V+TLG+  W
Sbjct: 148 KRLKILKIVYSKGFRRIQRRFHHSEVQVFTLGTSNW 183


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
 Frame = -3

Query: 287 PGFSLIGSVNGLLCLTSVSLFYHPF*YIFNPISKEEISLPESPRYCSHSVGSGFGFDLTD 108
           P F ++GS NGLLCL+     Y+   YI+NP +     LP+S +Y    V SGFGF+   
Sbjct: 120 PEFEVVGSCNGLLCLSDS--LYNDSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKT 177

Query: 107 DKYKVVRTL-----HAVQHKNDAELHYL-EAKVYTLGSGRW 3
            +YKV+R +     H    ++   ++ L E ++ TLG   W
Sbjct: 178 KEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPEW 218


>ref|XP_002331536.1| predicted protein [Populus trichocarpa] gi|222873760|gb|EEF10891.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 8/118 (6%)
 Frame = -3

Query: 332 FQQFLSLKFNGFFPTPGFSLIGSVNGLLCLTSVSLFYHPF*YIFNPISKEEISLPESPRY 153
           + QF SL  N   P  G  ++ S NGLL L+S  L  +P   + NPI++E I++P +  +
Sbjct: 107 YAQF-SLPLNDQLPFSGIEVVNSCNGLLYLSSY-LDKNPV-LVCNPITREYINIPAT--H 161

Query: 152 CSH------SVGSGFGFDLTDDKYKVVRTLHAVQHK--NDAELHYLEAKVYTLGSGRW 3
             H      +V SG GF L  ++YK++R          ++   H  +A++YTLG G W
Sbjct: 162 TDHQQERLQAVASGLGFSLKSNQYKLLRIFDVGYGHGFDNLRSHGRQAEIYTLGKGSW 219


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/70 (42%), Positives = 43/70 (61%)
 Frame = -3

Query: 287 PGFSLIGSVNGLLCLTSVSLFYHPF*YIFNPISKEEISLPESPRYCSHSVGSGFGFDLTD 108
           P F ++GS NGLLCL+  SLF     YI+NP +     LP+S +Y    V  GFGF+   
Sbjct: 119 PEFEVVGSCNGLLCLSD-SLFNDSL-YIYNPFTGRYKELPKSLQYPDQEVVFGFGFNPKT 176

Query: 107 DKYKVVRTLH 78
           ++YKV+R ++
Sbjct: 177 NEYKVIRIVY 186