BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032026
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera]   256   3e-66
ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [V...   251   1e-64
ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis tha...   245   4e-63
ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arab...   244   7e-63
ref|XP_002515195.1| peptide chain release factor, putative [Rici...   236   3e-60

>emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera]
          Length = 1542

 Score =  256 bits (653), Expect = 3e-66
 Identities = 136/204 (66%), Positives = 161/204 (78%)
 Frame = -3

Query: 612  LKQGFIQQKHWKTRNGNVKRFFSTNNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQ 433
            ++ GF+     KT    ++ +   + E QPQLSTDLI IME RL AIEHR+  LQ+F+N+
Sbjct: 1175 IQNGFLHSTMAKTPFSFIRPY---STELQPQLSTDLIGIMEQRLSAIEHRSAYLQDFINR 1231

Query: 432  PEGVTPSEYSRANKELRKIRSSMELITDLRSKQKEIDGLKSLIAECPEDKDMRDMAAEEL 253
            PE  +P EY+RANKELRK+RSS+E IT+LR+KQKEIDGLKSL+AEC EDKDM +MAAEEL
Sbjct: 1232 PEA-SPVEYARANKELRKLRSSIEHITELRNKQKEIDGLKSLMAECSEDKDMLNMAAEEL 1290

Query: 252  DEAIGEEKRXXXXXXXXXLPKDDADERDCILEVRAGTGGEEASLFALDIFRMYEKYADKQ 73
             +A GEEKR         LPKD+ADERDCILEVRAGTGGEEASLFA+DIF+MYEKY+ K 
Sbjct: 1291 GQAAGEEKRLQNLLLKSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKN 1350

Query: 72   GWKFDVVDIMESGLKGIKEASGAI 1
            GWKF+VVDI ES LKG KEASGAI
Sbjct: 1351 GWKFEVVDITESDLKGYKEASGAI 1374


>ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
           gi|297744098|emb|CBI37068.3| unnamed protein product
           [Vitis vinifera]
          Length = 392

 Score =  251 bits (640), Expect = 1e-64
 Identities = 131/180 (72%), Positives = 150/180 (83%)
 Frame = -3

Query: 540 NNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANKELRKIRSSME 361
           + E QPQLSTDLI IME RL AIEHR+  LQ+F+N+PE  +P EY+RANKELRK+RSS+E
Sbjct: 13  STELQPQLSTDLIGIMEQRLSAIEHRSAYLQDFINRPEA-SPVEYARANKELRKLRSSIE 71

Query: 360 LITDLRSKQKEIDGLKSLIAECPEDKDMRDMAAEELDEAIGEEKRXXXXXXXXXLPKDDA 181
            IT+LR+KQKEIDGLKSL+AEC EDKDM +MAAEEL +A  EEKR         LPKD+A
Sbjct: 72  HITELRNKQKEIDGLKSLMAECSEDKDMLNMAAEELGQAAEEEKRLQNLLLKSLLPKDEA 131

Query: 180 DERDCILEVRAGTGGEEASLFALDIFRMYEKYADKQGWKFDVVDIMESGLKGIKEASGAI 1
           DERDCILEVRAGTGGEEASLFA+DIF+MYEKY+ K GWKF+VVDI ES LKG KEASGAI
Sbjct: 132 DERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASGAI 191


>ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis thaliana]
           gi|124301088|gb|ABN04796.1| At2g47020 [Arabidopsis
           thaliana] gi|330255695|gb|AEC10789.1| Peptide chain
           release factor 1 [Arabidopsis thaliana]
          Length = 413

 Score =  245 bits (626), Expect = 4e-63
 Identities = 128/190 (67%), Positives = 150/190 (78%)
 Frame = -3

Query: 570 NGNVKRFFSTNNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANK 391
           + N+ R ++T  E  PQLS DLIKIM+ RL AIEHRN  LQ  +NQPE  +P E+SRANK
Sbjct: 33  SSNMIRLYTTGME--PQLSPDLIKIMDQRLSAIEHRNAVLQKLINQPE-YSPEEFSRANK 89

Query: 390 ELRKIRSSMELITDLRSKQKEIDGLKSLIAECPEDKDMRDMAAEELDEAIGEEKRXXXXX 211
           ELRK+R SM LI DLR+KQKEIDGLKSL++E  +DKDM D+A  ELDEA+ EEKR     
Sbjct: 90  ELRKLRDSMLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLL 149

Query: 210 XXXXLPKDDADERDCILEVRAGTGGEEASLFALDIFRMYEKYADKQGWKFDVVDIMESGL 31
               LPKD+ADERDCILEVRAGTGGEEASLFA+DIFRMYE+Y+ K+GWKFD+VDI ES +
Sbjct: 150 LKSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDM 209

Query: 30  KGIKEASGAI 1
           KG KEAS AI
Sbjct: 210 KGYKEASAAI 219


>ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp.
           lyrata] gi|297327940|gb|EFH58360.1| hypothetical protein
           ARALYDRAFT_904175 [Arabidopsis lyrata subsp. lyrata]
          Length = 410

 Score =  244 bits (624), Expect = 7e-63
 Identities = 128/191 (67%), Positives = 149/191 (78%)
 Frame = -3

Query: 573 RNGNVKRFFSTNNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRAN 394
           R+  + R ++T  E  PQLS DLIKIM+ RL AIEHRN  LQ  +NQPE  +P E+SRAN
Sbjct: 29  RSSKMIRLYTTGME--PQLSPDLIKIMDQRLSAIEHRNALLQKLINQPE-YSPEEFSRAN 85

Query: 393 KELRKIRSSMELITDLRSKQKEIDGLKSLIAECPEDKDMRDMAAEELDEAIGEEKRXXXX 214
           KELRK+R SM LI DLR+KQKEIDGLKSL++E  +DKDM DMA  ELDEA+ EEKR    
Sbjct: 86  KELRKLRDSMFLINDLRAKQKEIDGLKSLVSESSDDKDMLDMAVSELDEAVEEEKRLQTL 145

Query: 213 XXXXXLPKDDADERDCILEVRAGTGGEEASLFALDIFRMYEKYADKQGWKFDVVDIMESG 34
                LPKD+ADERDCILEVRAGTGGEEASLFA+DIFRMYE+Y+ K+ WKFD+VDI ES 
Sbjct: 146 LLKSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKAWKFDIVDITESD 205

Query: 33  LKGIKEASGAI 1
           +KG KEAS AI
Sbjct: 206 MKGYKEASAAI 216


>ref|XP_002515195.1| peptide chain release factor, putative [Ricinus communis]
           gi|223545675|gb|EEF47179.1| peptide chain release
           factor, putative [Ricinus communis]
          Length = 422

 Score =  236 bits (601), Expect = 3e-60
 Identities = 126/190 (66%), Positives = 149/190 (78%), Gaps = 2/190 (1%)
 Frame = -3

Query: 564 NVKRFFST--NNESQPQLSTDLIKIMETRLIAIEHRNTCLQNFMNQPEGVTPSEYSRANK 391
           N    FS   + E Q  LS DLI+IME RL AIEHR+  L+NF+++ E  +P+EYSRANK
Sbjct: 40  NASHLFSRAYSTELQSHLSPDLIRIMEQRLSAIEHRSAYLENFIDKLEA-SPAEYSRANK 98

Query: 390 ELRKIRSSMELITDLRSKQKEIDGLKSLIAECPEDKDMRDMAAEELDEAIGEEKRXXXXX 211
           ELRK+R  +ELI++LRS QKEIDGL+SL+AECPEDK M DMA EEL++AI EEKR     
Sbjct: 99  ELRKLRRPVELISELRSIQKEIDGLRSLMAECPEDKHMIDMANEELNQAIEEEKRLQNVL 158

Query: 210 XXXXLPKDDADERDCILEVRAGTGGEEASLFALDIFRMYEKYADKQGWKFDVVDIMESGL 31
               LP DDADERDCILEVRAGTGGEEASLF++DIFRMYE+Y+ K+GWKF+VVDI ES L
Sbjct: 159 LKSLLPTDDADERDCILEVRAGTGGEEASLFSMDIFRMYERYSQKKGWKFEVVDITESDL 218

Query: 30  KGIKEASGAI 1
           KG KEAS AI
Sbjct: 219 KGYKEASAAI 228