BLASTX nr result

ID: Coptis23_contig00032021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032021
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313967.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002274679.2| PREDICTED: zinc finger protein CONSTANS-LIKE...    67   2e-09
ref|XP_003544900.1| PREDICTED: zinc finger protein CONSTANS-LIKE...    67   2e-09
ref|NP_001242642.1| uncharacterized protein LOC100803772 [Glycin...    65   4e-09
ref|XP_003615824.1| Zinc finger protein CONSTANS-like protein [M...    59   5e-07

>ref|XP_002313967.1| predicted protein [Populus trichocarpa] gi|222850375|gb|EEE87922.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/45 (75%), Positives = 36/45 (80%)
 Frame = +3

Query: 120 IKEEISSLWDDDEKNISMNLNLNLNYQEVMDAWSDRGSLWADDYS 254
           IKEE    WD DEK +S  LNLNLNYQEV+DAWSDRGSL ADDYS
Sbjct: 78  IKEESLGFWDGDEKRVS--LNLNLNYQEVLDAWSDRGSLLADDYS 120


>ref|XP_002274679.2| PREDICTED: zinc finger protein CONSTANS-LIKE 7-like [Vitis
           vinifera]
          Length = 218

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/55 (61%), Positives = 38/55 (69%)
 Frame = +3

Query: 90  FEEQTCYNSFIKEEISSLWDDDEKNISMNLNLNLNYQEVMDAWSDRGSLWADDYS 254
           F E+  Y   IK E     D DEK   M+LNLNLNYQEV++AWSDRGSLWADD S
Sbjct: 94  FNEENHYGKVIKREDFGSGDGDEK--MMSLNLNLNYQEVLEAWSDRGSLWADDCS 146


>ref|XP_003544900.1| PREDICTED: zinc finger protein CONSTANS-LIKE 8-like [Glycine max]
          Length = 220

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/72 (52%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
 Frame = +3

Query: 48  EGEMVSKKTKRSEWF--EEQTCYNSFIKEEISSLWD-DDEKNISMNLNLNLNYQEVMDAW 218
           EG+  ++K  RS+    EEQ          I   W+ DDEK ++  LNLNLNYQEV+DAW
Sbjct: 84  EGKEHTRKNTRSKCLFEEEQAIIRRESNNNIVGFWEVDDEKMVA--LNLNLNYQEVLDAW 141

Query: 219 SDRGSLWADDYS 254
           SDRGSLWADD S
Sbjct: 142 SDRGSLWADDCS 153


>ref|NP_001242642.1| uncharacterized protein LOC100803772 [Glycine max]
           gi|255636908|gb|ACU18787.1| unknown [Glycine max]
          Length = 200

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/73 (52%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
 Frame = +3

Query: 45  GEGEMVSKKTKRSEWF--EEQTCYNSFIKEEISSLWD-DDEKNISMNLNLNLNYQEVMDA 215
           GE E   K+ +RS+    EE+          I   W+ DDEK ++  LNLNLNYQEV+DA
Sbjct: 80  GEDENEGKENRRSKCLFDEEEQEMKIENNNNIVGFWEMDDEKMVA--LNLNLNYQEVLDA 137

Query: 216 WSDRGSLWADDYS 254
           WSDRGSLWADD S
Sbjct: 138 WSDRGSLWADDCS 150


>ref|XP_003615824.1| Zinc finger protein CONSTANS-like protein [Medicago truncatula]
           gi|217071490|gb|ACJ84105.1| unknown [Medicago
           truncatula] gi|355517159|gb|AES98782.1| Zinc finger
           protein CONSTANS-like protein [Medicago truncatula]
           gi|388503420|gb|AFK39776.1| unknown [Medicago
           truncatula]
          Length = 217

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = +3

Query: 45  GEGEMVSKKTKRSEWFEEQTCYNSFIKEEISSLWD-DDEKNISMNLNLNLNYQEVMDAWS 221
           G+ E +SK     +   ++  YN          W+ DDEK+++  LNLNLNYQEV+DAWS
Sbjct: 88  GKDENISKCNYEEKKIIKRENYND-------GFWEVDDEKSLA--LNLNLNYQEVLDAWS 138

Query: 222 DRGSLWADDYS 254
           +RGSLWA+D S
Sbjct: 139 NRGSLWANDCS 149


Top