BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00032017
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containi...   174   9e-42
ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containi...   171   7e-41
ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containi...   167   8e-40
ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|2...   165   3e-39
ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37

>ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  174 bits (440), Expect = 9e-42
 Identities = 80/112 (71%), Positives = 94/112 (83%)
 Frame = -2

Query: 336 LDPDDVGTYILLSNMYAKARRWDGVANVRKFMRGREIKKEPGVSWIQVKNNTHVFVSEDK 157
           +DP DVGTYILLSNMYAKA+RWDGV  +RK MR R +KKEPG SWI+++N+ HVFVSE K
Sbjct: 529 MDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKEPGASWIEIRNSIHVFVSEGK 588

Query: 156 KHKESIQIYEKLAELLSQIKLLGYVPDIATVLHDVEDEQKEEYLSFHSEKLA 1
            H ES QIYEK+ ELL+ I+ +GYVPDIA V HDVEDEQK EY+S+HSEKLA
Sbjct: 589 THPESNQIYEKVQELLTMIRPMGYVPDIAAVFHDVEDEQKREYVSYHSEKLA 640


>ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  171 bits (432), Expect = 7e-41
 Identities = 80/112 (71%), Positives = 94/112 (83%)
 Frame = -2

Query: 336 LDPDDVGTYILLSNMYAKARRWDGVANVRKFMRGREIKKEPGVSWIQVKNNTHVFVSEDK 157
           +DP DVGTY LLSNMYAKARRWDGV  +RK MR R IKKEPG SW+ ++N+ HVF+SE  
Sbjct: 520 MDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGS 579

Query: 156 KHKESIQIYEKLAELLSQIKLLGYVPDIATVLHDVEDEQKEEYLSFHSEKLA 1
            H ESIQIY+K+ +LL+ IK LGYVP+IA+VLHDVEDEQKE YLS+HSEKLA
Sbjct: 580 NHPESIQIYKKVQQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLA 631


>ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  167 bits (423), Expect = 8e-40
 Identities = 77/112 (68%), Positives = 90/112 (80%)
 Frame = -2

Query: 336 LDPDDVGTYILLSNMYAKARRWDGVANVRKFMRGREIKKEPGVSWIQVKNNTHVFVSEDK 157
           +DP DVGTY LLSNM+AKAR+WDGV  +RK M+ R IKKEPG SW+ ++NNTHVFVSE  
Sbjct: 529 MDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGS 588

Query: 156 KHKESIQIYEKLAELLSQIKLLGYVPDIATVLHDVEDEQKEEYLSFHSEKLA 1
            H ES QI+EK+ +LL+ IK LGY PD+  VLHDVEDEQKE YLS HSEKLA
Sbjct: 589 NHPESTQIFEKVQQLLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLA 640


>ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|222867067|gb|EEF04198.1|
           predicted protein [Populus trichocarpa]
          Length = 707

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/112 (68%), Positives = 91/112 (81%)
 Frame = -2

Query: 336 LDPDDVGTYILLSNMYAKARRWDGVANVRKFMRGREIKKEPGVSWIQVKNNTHVFVSEDK 157
           +DP+DVGTY LLSN+YAK +RWDGV  VRK MR ++IKKEPGVSWI++ N TH+F SED 
Sbjct: 533 MDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDN 592

Query: 156 KHKESIQIYEKLAELLSQIKLLGYVPDIATVLHDVEDEQKEEYLSFHSEKLA 1
           KH +  Q Y+K+ ELL+ IK LGY PDI  VLHDVEDEQKE YLS+HSEKLA
Sbjct: 593 KHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVEDEQKEYYLSYHSEKLA 644


>ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Brachypodium distachyon]
          Length = 682

 Score =  159 bits (402), Expect = 2e-37
 Identities = 77/112 (68%), Positives = 89/112 (79%)
 Frame = -2

Query: 336 LDPDDVGTYILLSNMYAKARRWDGVANVRKFMRGREIKKEPGVSWIQVKNNTHVFVSEDK 157
           L P+DVGTY+LLSNMYAKA RWDGV  VRK MR R ++KEPGVSWIQV +  HVF SEDK
Sbjct: 508 LKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSEVHVFTSEDK 567

Query: 156 KHKESIQIYEKLAELLSQIKLLGYVPDIATVLHDVEDEQKEEYLSFHSEKLA 1
            HK   QI  KL EL+ QIK++GYVP+ A VLHDVE EQKEE+L +HSEK+A
Sbjct: 568 NHKWINQITIKLKELIGQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHSEKMA 619