BLASTX nr result

ID: Coptis23_contig00031999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031999
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80518.1| hypothetical protein VITISV_009170 [Vitis vinifera]   116   3e-30
emb|CBI34704.3| unnamed protein product [Vitis vinifera]              114   5e-29
ref|XP_002880098.1| hypothetical protein ARALYDRAFT_322090 [Arab...    99   3e-25
ref|XP_002269499.1| PREDICTED: uncharacterized protein LOC100247...   104   4e-25
ref|XP_004141419.1| PREDICTED: uncharacterized protein LOC101213...    99   9e-25

>emb|CAN80518.1| hypothetical protein VITISV_009170 [Vitis vinifera]
          Length = 393

 Score =  116 bits (291), Expect(2) = 3e-30
 Identities = 73/189 (38%), Positives = 108/189 (57%), Gaps = 7/189 (3%)
 Frame = -1

Query: 679 NKLAIKTFKTNTG-IYNCTDITRQTALENPLLQNHDM--QMRPTSLPREMTTGTSI---E 518
           NK A+KT KT  G IY+C D  +Q A ++PLL+NH+    MRPTS PR ++    +   +
Sbjct: 44  NKPAVKTIKTKHGDIYDCVDFYKQPAFDHPLLKNHNFXPHMRPTSPPRRVSPEKEVPKPD 103

Query: 517 YKYSTAILTNIDCPQGTVPIRRIGKENLRRANSFSQSYVSDIHPRTKEFPGLHIAFKASL 338
           Y +    L    CP GTVPIRR  K++L RA  +S+ + S I+P T + PG H A   ++
Sbjct: 104 YXHVKXGLEGGGCPMGTVPIRRTTKDDLIRAKLYSEMHASKINPLTDDQPGKHFAVAQTI 163

Query: 337 NQQTYYGVCASLSLNNPKVGAKQSSTSQMWIQSERSDTLNGLQAGWIVSPEL-NGDNLTR 161
               Y GV A LS+ N  V A Q ++ ++ I+    +    L+AGW V+P L  GD  TR
Sbjct: 164 ADIDYDGVGAMLSVWNLPVQAPQYTSGRVKIK----NGAESLEAGWTVNPGLYGGDKRTR 219

Query: 160 LFVQSTSEQ 134
           +++ + + Q
Sbjct: 220 MYIYTNAGQ 228



 Score = 41.6 bits (96), Expect(2) = 3e-30
 Identities = 20/43 (46%), Positives = 27/43 (62%)
 Frame = -3

Query: 131 CFNTLCGSFVQTGKNHPVDAALGPISTLGGPQFVINLSILRDS 3
           CFNT CG F+Q   + PVD  + P+ST G   + I LSI +D+
Sbjct: 231 CFNTPCG-FIQASADIPVDMVIEPVSTYGQLPYYITLSIYQDT 272


>emb|CBI34704.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  114 bits (285), Expect(2) = 5e-29
 Identities = 73/189 (38%), Positives = 108/189 (57%), Gaps = 7/189 (3%)
 Frame = -1

Query: 679 NKLAIKTFKTNTG-IYNCTDITRQTALENPLLQNHDM--QMRPTSLPREMTTGTSI---E 518
           NK A+KT K     IY+C +  +Q A ++PLL+NH+   QMRPTS PR ++    +   +
Sbjct: 44  NKPAVKTIKVKIKYIYDCVNFYKQPAFDHPLLKNHNFHPQMRPTSPPRRVSPEKEVPKPD 103

Query: 517 YKYSTAILTNIDCPQGTVPIRRIGKENLRRANSFSQSYVSDIHPRTKEFPGLHIAFKASL 338
           YK     L    CP GTVPIRR  K++L RA  +S+ + S I+P T + PG H A   ++
Sbjct: 104 YKPVKMGLEGGGCPMGTVPIRRTTKDDLIRAKLYSEMHASKINPLTDDQPGKHFAVAQTI 163

Query: 337 NQQTYYGVCASLSLNNPKVGAKQSSTSQMWIQSERSDTLNGLQAGWIVSPEL-NGDNLTR 161
               Y GV A LS+ N  V A Q ++ ++ I+    +    L+AGW V+P L  GDN TR
Sbjct: 164 ADIDYDGVGAILSVWNLPVQAPQYTSGRVKIK----NGAESLEAGWTVNPGLYGGDNRTR 219

Query: 160 LFVQSTSEQ 134
           +++ + + Q
Sbjct: 220 MYIYTNAGQ 228



 Score = 39.7 bits (91), Expect(2) = 5e-29
 Identities = 20/43 (46%), Positives = 27/43 (62%)
 Frame = -3

Query: 131 CFNTLCGSFVQTGKNHPVDAALGPISTLGGPQFVINLSILRDS 3
           CFNT CG F+Q+  + PVD  L P+S  G   + I LSI +D+
Sbjct: 231 CFNTPCG-FIQSSIDIPVDMVLEPVSRYGEKPYGITLSIYQDT 272


>ref|XP_002880098.1| hypothetical protein ARALYDRAFT_322090 [Arabidopsis lyrata subsp.
           lyrata] gi|297325937|gb|EFH56357.1| hypothetical protein
           ARALYDRAFT_322090 [Arabidopsis lyrata subsp. lyrata]
          Length = 372

 Score = 99.0 bits (245), Expect(2) = 3e-25
 Identities = 68/190 (35%), Positives = 101/190 (53%), Gaps = 9/190 (4%)
 Frame = -1

Query: 679 NKLAIKTFKTNTG-IYNCTDITRQTALENPLLQNHDMQMRPTSLPREMTTGTSIEYKYST 503
           NK A+K+ K+  G I +C  IT Q A ++PLL+NH +Q++P+ +P      T ++ K   
Sbjct: 43  NKPALKSIKSEDGDIIDCVPITSQPAFDHPLLKNHTIQVKPSFVPEGEGDSTYMKKKTKA 102

Query: 502 AILTNID--CPQGTVPIRRIGKENLRRANS---FSQSYVSDIHPRTKEFPGLH--IAFKA 344
             + + D  CP+ T+PIRR  KE++ RA S   F +         T   P  H   AF  
Sbjct: 103 TQVWHKDGECPEKTIPIRRTKKEDILRAKSLERFGKKNHQYSPEDTSSSPNYHHEYAFMG 162

Query: 343 SLNQQTYYGVCASLSLNNPKVG-AKQSSTSQMWIQSERSDTLNGLQAGWIVSPELNGDNL 167
             N + +YG  AS+++  P V    + S SQ W+ S    + N ++AGW V P + GDN 
Sbjct: 163 VRNGK-FYGTKASINIWKPNVADPSEFSLSQTWLVSGVGTSRNTIEAGWQVYPGMYGDNN 221

Query: 166 TRLFVQSTSE 137
            RLFV  TS+
Sbjct: 222 PRLFVYWTSD 231



 Score = 42.4 bits (98), Expect(2) = 3e-25
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = -3

Query: 140 RTSCFNTLCGSFVQTGKNHPVDAALGPISTLGGPQFVINLSILRD 6
           +T C+N LCG FVQT   + V  +   +S   G Q  +NL I +D
Sbjct: 235 KTGCYNLLCGGFVQTNNQYSVGGSYNTVSEYDGAQLSLNLLIWKD 279


>ref|XP_002269499.1| PREDICTED: uncharacterized protein LOC100247715 [Vitis vinifera]
           gi|296080944|emb|CBI18666.3| unnamed protein product
           [Vitis vinifera]
          Length = 409

 Score =  104 bits (259), Expect(2) = 4e-25
 Identities = 73/200 (36%), Positives = 109/200 (54%), Gaps = 19/200 (9%)
 Frame = -1

Query: 679 NKLAIKTFKTNTG-IYNCTDITRQTALENPLLQNHDMQMRPTSLPREMTT---GTSIEYK 512
           NK A+KT K+  G I +C  +T Q A ++P+L+NH +QM+P+  P  + T     S  +K
Sbjct: 39  NKRAVKTIKSRDGDIIDCVRVTHQPAFDHPMLKNHTIQMKPSFHPEGLFTEMKAPSKSHK 98

Query: 511 YSTAILT----NIDCPQGTVPIRRIGKENLRRANSFSQ----SYVSDIHPRTKEFPGL-- 362
            S  +      N  CP+GTVPIRR  +E++ RANS S+     + +   PR+ + P L  
Sbjct: 99  RSKPVTQLWQLNGRCPKGTVPIRRTKREDVLRANSISRFGKKKHRTFPQPRSAD-PDLIS 157

Query: 361 ---HIAFKASLNQQTYYGVCASLSLNNPKVGA-KQSSTSQMWIQSER-SDTLNGLQAGWI 197
              H      +    YYG  A++++  PK+    + S SQMWI      + LN ++ GW 
Sbjct: 158 QSGHQHAIVYVEGDKYYGAKATVNVWEPKIQQPNEFSLSQMWILGGSFGEDLNSIEVGWQ 217

Query: 196 VSPELNGDNLTRLFVQSTSE 137
           VSP+L GDN +RLF   TS+
Sbjct: 218 VSPDLYGDNNSRLFTYWTSD 237



 Score = 36.6 bits (83), Expect(2) = 4e-25
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -3

Query: 137 TSCFNTLCGSFVQTGKNHPVDAALGPISTLGGPQFVINLSILRD 6
           T C+N LC  FVQ      + A++ P+S   G Q+ I++ + +D
Sbjct: 242 TGCYNLLCSGFVQINNEIAMGASIFPVSRYHGSQYDISILVWKD 285


>ref|XP_004141419.1| PREDICTED: uncharacterized protein LOC101213587 [Cucumis sativus]
          Length = 409

 Score = 99.0 bits (245), Expect(2) = 9e-25
 Identities = 66/191 (34%), Positives = 100/191 (52%), Gaps = 17/191 (8%)
 Frame = -1

Query: 679 NKLAIKTFKTNTG-IYNCTDITRQTALENPLLQNHDMQMRPT---SLPREMTTGTSIE-- 518
           NK +IKT  +  G I  C D+ +Q A ++PLL+NH +QM+P     L    T   S    
Sbjct: 48  NKPSIKTIYSEDGDIMECVDVYKQPAFDHPLLKNHTIQMKPDLSIDLKMSSTQNESFGSR 107

Query: 517 -YKYSTAILTNIDCPQGTVPIRRIGKENLRRANSFSQSYVSDIHPRTKEFPGLHIAFKAS 341
            Y + T   +   CP+GT+PIRR+G+E+L RANS        +H   K+FP         
Sbjct: 108 LYPFQTWQKSG-SCPKGTIPIRRVGREDLLRANS--------LHHFGKKFPYGDSKLGQE 158

Query: 340 LNQQT---------YYGVCASLSLNNPKVGAKQSST-SQMWIQSERSDTLNGLQAGWIVS 191
            N+ T         Y G   ++++ NPKV      T S++W+++  S+    ++AGW+V+
Sbjct: 159 FNRSTAILITTGVNYIGASGNINVWNPKVDLPNDFTASKVWLKNGPSEKFESVEAGWMVN 218

Query: 190 PELNGDNLTRL 158
           P+L GD  TRL
Sbjct: 219 PKLYGDAKTRL 229



 Score = 40.8 bits (94), Expect(2) = 9e-25
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = -3

Query: 137 TSCFNTLCGSFVQTGKNHPVDAALGPISTLGGPQFVINLSILRD 6
           T CF+  C  FVQT  +  + A + P+S+  G Q+ I++ I +D
Sbjct: 241 TGCFDLTCSGFVQTNPSVAIGAVIEPLSSTNGQQYTISIGIFQD 284


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