BLASTX nr result

ID: Coptis23_contig00031995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031995
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD22703.1| putative TNP2-like transposon protein [Arabidopsi...   154   9e-36
gb|AAC97237.1| putative TNP2-like transposon protein [Arabidopsi...   153   1e-35
pir||E85079 hypothetical protein AT4g08070 [imported] - Arabidop...   150   1e-34
dbj|BAB02147.1| TNP2-like transposon protein-like [Arabidopsis t...   140   1e-31
ref|XP_003635593.1| PREDICTED: uncharacterized protein LOC100854...   129   2e-28

>gb|AAD22703.1| putative TNP2-like transposon protein [Arabidopsis thaliana]
          Length = 619

 Score =  154 bits (388), Expect = 9e-36
 Identities = 73/107 (68%), Positives = 88/107 (82%)
 Frame = +2

Query: 2   SNIGKQVVGEEFKIASLKSHDFHVLMQQLLAVALRGLLPKGPRTAIFHLCAFYNELCKKV 181
           SNI + V   E KI+ LKSHD+HV+MQQLL VALRGLLPKGPRTAI  LCAF+N LC++V
Sbjct: 501 SNISRGVSVGECKISGLKSHDYHVMMQQLLPVALRGLLPKGPRTAILRLCAFFNYLCQRV 560

Query: 182 VNTERLKKLEGDVAETLCMLERFFPPSFFDIMVHLTIHLAREARVGG 322
           ++ E +  LE ++ ETLCM +RFFPP+FFDIMVHLTIHL REAR+GG
Sbjct: 561 IDIEVISVLETEIVETLCMFKRFFPPTFFDIMVHLTIHLGREARLGG 607


>gb|AAC97237.1| putative TNP2-like transposon protein [Arabidopsis thaliana]
          Length = 889

 Score =  153 bits (387), Expect = 1e-35
 Identities = 71/107 (66%), Positives = 87/107 (81%)
 Frame = +2

Query: 2   SNIGKQVVGEEFKIASLKSHDFHVLMQQLLAVALRGLLPKGPRTAIFHLCAFYNELCKKV 181
           SNI + V  E+ KI  LKSHD+HVLMQQLL VAL GLLPKGPRTAI  LC+F+N LC++V
Sbjct: 647 SNISRGVSLEDCKIMGLKSHDYHVLMQQLLPVALMGLLPKGPRTAIIRLCSFFNHLCQRV 706

Query: 182 VNTERLKKLEGDVAETLCMLERFFPPSFFDIMVHLTIHLAREARVGG 322
           ++ E +  +E ++ ETLCM ERFFPP+FFDIMVHLT+HL REAR+GG
Sbjct: 707 IDIEVISVMEAEIVETLCMFERFFPPTFFDIMVHLTVHLGREARLGG 753


>pir||E85079 hypothetical protein AT4g08070 [imported] - Arabidopsis thaliana
           gi|5724773|gb|AAD48077.1|AF160183_4 contains similarity
           to Antirrhinum majus hypothetical protein TNP2
           (GB:X57297); may be a pseudogene [Arabidopsis thaliana]
           gi|7267447|emb|CAB81144.1| AT4g08070 [Arabidopsis
           thaliana]
          Length = 767

 Score =  150 bits (378), Expect = 1e-34
 Identities = 68/107 (63%), Positives = 87/107 (81%)
 Frame = +2

Query: 2   SNIGKQVVGEEFKIASLKSHDFHVLMQQLLAVALRGLLPKGPRTAIFHLCAFYNELCKKV 181
           S+I + V  E+ K+  LKSHD+HVLMQQLL +ALRGLLPKGPR AI  LC F+N LC++V
Sbjct: 554 SDIARGVSLEDCKVTGLKSHDYHVLMQQLLPIALRGLLPKGPRVAIGRLCKFFNHLCQRV 613

Query: 182 VNTERLKKLEGDVAETLCMLERFFPPSFFDIMVHLTIHLAREARVGG 322
           ++ E+L ++E ++ ETLC+ ERFFPPSFFDIM HLT+HL REAR+GG
Sbjct: 614 IDMEQLLEMEAEIVETLCLFERFFPPSFFDIMEHLTVHLGREARLGG 660


>dbj|BAB02147.1| TNP2-like transposon protein-like [Arabidopsis thaliana]
          Length = 786

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/107 (63%), Positives = 85/107 (79%)
 Frame = +2

Query: 2   SNIGKQVVGEEFKIASLKSHDFHVLMQQLLAVALRGLLPKGPRTAIFHLCAFYNELCKKV 181
           SNI + V  E+  I  LKSHD+HVLMQQLL VA+RGLLPKG R AI  LCAF+N+LC++V
Sbjct: 528 SNISRCVKIEDSTIKGLKSHDYHVLMQQLLPVAIRGLLPKGVRIAIGRLCAFFNKLCQRV 587

Query: 182 VNTERLKKLEGDVAETLCMLERFFPPSFFDIMVHLTIHLAREARVGG 322
           ++ E +  +E ++ ET+CM ERFFPPSFFDIMVHLT+HL REAR+ G
Sbjct: 588 IDRE-VSAMENEIVETICMFERFFPPSFFDIMVHLTVHLGREARLCG 633


>ref|XP_003635593.1| PREDICTED: uncharacterized protein LOC100854395, partial [Vitis
           vinifera]
          Length = 683

 Score =  129 bits (324), Expect = 2e-28
 Identities = 63/107 (58%), Positives = 77/107 (71%)
 Frame = +2

Query: 2   SNIGKQVVGEEFKIASLKSHDFHVLMQQLLAVALRGLLPKGPRTAIFHLCAFYNELCKKV 181
           SN    V  E+ K+  LKSHD+H LMQQLL VALR LLPK  R AI  L  F+N LCKKV
Sbjct: 512 SNFRNLVSMEDLKLYGLKSHDYHTLMQQLLPVALRSLLPKHVRHAIARLSLFFNALCKKV 571

Query: 182 VNTERLKKLEGDVAETLCMLERFFPPSFFDIMVHLTIHLAREARVGG 322
           V+   L KL+ ++  TLC+LE++FPPSFFDIM+HLT+HL RE R+ G
Sbjct: 572 VDVSTLDKLQNELVVTLCLLEKYFPPSFFDIMIHLTVHLVREVRLCG 618


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