BLASTX nr result

ID: Coptis23_contig00031972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031972
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303866.1| AP2 domain-containing transcription factor [...   104   9e-21
ref|XP_002512756.1| conserved hypothetical protein [Ricinus comm...   100   9e-20
ref|XP_002273046.2| PREDICTED: AP2-like ethylene-responsive tran...   100   1e-19
ref|XP_002272159.1| PREDICTED: AP2-like ethylene-responsive tran...    94   1e-17
emb|CAN69612.1| hypothetical protein VITISV_038859 [Vitis vinifera]    94   1e-17

>ref|XP_002303866.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222841298|gb|EEE78845.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 275

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/71 (69%), Positives = 59/71 (83%), Gaps = 2/71 (2%)
 Frame = +1

Query: 1   SKFKEMLERTSAQDYPSTPPESH--PPKCSFPEEVQTYFDCQDSDSYVEGNDVIFWDLNS 174
           SKFKEMLERTSA D P TPPES   PP+ SFP+++QTYFDCQDS SY +G+D+IF DL+S
Sbjct: 204 SKFKEMLERTSASDCPLTPPESDRDPPRRSFPDDIQTYFDCQDSSSYTDGDDIIFGDLHS 263

Query: 175 FSSPMFEHELD 207
           F+SP+F  ELD
Sbjct: 264 FASPIFHCELD 274


>ref|XP_002512756.1| conserved hypothetical protein [Ricinus communis]
           gi|223547767|gb|EEF49259.1| conserved hypothetical
           protein [Ricinus communis] gi|441477735|dbj|BAM75180.1|
           AP2-type transcription factor [Ricinus communis]
          Length = 330

 Score =  100 bits (250), Expect = 9e-20
 Identities = 43/69 (62%), Positives = 59/69 (85%)
 Frame = +1

Query: 1   SKFKEMLERTSAQDYPSTPPESHPPKCSFPEEVQTYFDCQDSDSYVEGNDVIFWDLNSFS 180
           +KFKEMLERTSA D P TPPES PP+ SFP+++QT+FDCQD+ S+ EG+D+IF +L++F+
Sbjct: 261 TKFKEMLERTSANDCPMTPPESEPPRRSFPDDIQTFFDCQDTGSFTEGDDIIFGELDAFA 320

Query: 181 SPMFEHELD 207
           SP+F  EL+
Sbjct: 321 SPIFHCELN 329


>ref|XP_002273046.2| PREDICTED: AP2-like ethylene-responsive transcription factor
           At1g16060 [Vitis vinifera]
          Length = 347

 Score =  100 bits (249), Expect = 1e-19
 Identities = 45/70 (64%), Positives = 57/70 (81%)
 Frame = +1

Query: 1   SKFKEMLERTSAQDYPSTPPESHPPKCSFPEEVQTYFDCQDSDSYVEGNDVIFWDLNSFS 180
           SKFKEM+E T+A D+ STPPES  P+CSFP+++QTYF+CQDS SY EG+DVIF +LNSF 
Sbjct: 278 SKFKEMMEMTTAADHLSTPPESELPRCSFPDDIQTYFECQDSGSYEEGDDVIFSELNSFI 337

Query: 181 SPMFEHELDA 210
            PMF+ +  A
Sbjct: 338 PPMFQCDFSA 347


>ref|XP_002272159.1| PREDICTED: AP2-like ethylene-responsive transcription factor
           At1g16060-like [Vitis vinifera]
          Length = 361

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/70 (62%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
 Frame = +1

Query: 1   SKFKEMLERTSAQDYPSTPPES-HPPKCSFPEEVQTYFDCQDSDSYVEGNDVIFWDLNSF 177
           SKFKEMLERTS  D P TPP+    P+ SFP+++QTYFDCQ+++SY E +D+IF DL  F
Sbjct: 291 SKFKEMLERTSTADCPLTPPDQIEMPRSSFPDDIQTYFDCQETNSYGESDDIIFGDLKYF 350

Query: 178 SSPMFEHELD 207
           SSPMF+ ELD
Sbjct: 351 SSPMFQCELD 360


>emb|CAN69612.1| hypothetical protein VITISV_038859 [Vitis vinifera]
          Length = 338

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/70 (62%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
 Frame = +1

Query: 1   SKFKEMLERTSAQDYPSTPPES-HPPKCSFPEEVQTYFDCQDSDSYVEGNDVIFWDLNSF 177
           SKFKEMLERTS  D P TPP+    P+ SFP+++QTYFDCQ+++SY E +D+IF DL  F
Sbjct: 268 SKFKEMLERTSTADCPLTPPDQIEMPRSSFPDDIQTYFDCQETNSYGESDDIIFGDLKYF 327

Query: 178 SSPMFEHELD 207
           SSPMF+ ELD
Sbjct: 328 SSPMFQCELD 337


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