BLASTX nr result

ID: Coptis23_contig00031966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031966
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268444.1| PREDICTED: uncharacterized protein LOC100250...   169   2e-40
ref|XP_002519964.1| conserved hypothetical protein [Ricinus comm...   154   6e-37
ref|XP_002326573.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-35
gb|AAP45173.1| hypothetical protein SBB1_14t00005 [Solanum bulbo...   147   4e-35
ref|XP_002335493.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33

>ref|XP_002268444.1| PREDICTED: uncharacterized protein LOC100250134 [Vitis vinifera]
           gi|296085169|emb|CBI28664.3| unnamed protein product
           [Vitis vinifera]
          Length = 540

 Score =  169 bits (428), Expect(2) = 2e-40
 Identities = 76/121 (62%), Positives = 92/121 (76%)
 Frame = +3

Query: 3   IGSLFCLPAGFFNVAWIFPPYIAAIVAASVVCNASHTHHLGVMVRGYSTSVESQHQFPQR 182
           IG++FCLP+GFF   WIFPPYI AIVAA  VC ASHT HLG+M+RG++    S+ QF  R
Sbjct: 176 IGAIFCLPSGFFKTKWIFPPYIVAIVAAYTVCTASHTRHLGLMIRGFTGHPISKSQFSDR 235

Query: 183 RSVGSWLSLHATTLSCLGGGIISTFTYRMLHHKEKFLSLWLVSIFSGLKWIVGSAHAFL* 362
           R V  WLS+HAT+  CLG  IISTFTY ML+  EKF+SLW+VSIFSGLKW++G  H F+ 
Sbjct: 236 RGVAGWLSVHATSAGCLGAAIISTFTYHMLYPSEKFISLWIVSIFSGLKWLIGIFHIFMV 295

Query: 363 N 365
           N
Sbjct: 296 N 296



 Score = 21.6 bits (44), Expect(2) = 2e-40
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 341 VSPCFPLKHHMLTVFKYPHA 400
           +S  +    H++++FKYP A
Sbjct: 304 LSATYSTTPHVVSIFKYPQA 323


>ref|XP_002519964.1| conserved hypothetical protein [Ricinus communis]
           gi|223541010|gb|EEF42568.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 556

 Score =  154 bits (389), Expect(2) = 6e-37
 Identities = 72/118 (61%), Positives = 87/118 (73%)
 Frame = +3

Query: 3   IGSLFCLPAGFFNVAWIFPPYIAAIVAASVVCNASHTHHLGVMVRGYSTSVESQHQFPQR 182
           IG+ FCLP GFFNV WIFPPYIAAIVAAS+V  ASHT  L +MV+G++       QF  R
Sbjct: 188 IGAFFCLPTGFFNVTWIFPPYIAAIVAASIVATASHTRQLALMVKGFTGPNLQHSQFQTR 247

Query: 183 RSVGSWLSLHATTLSCLGGGIISTFTYRMLHHKEKFLSLWLVSIFSGLKWIVGSAHAF 356
           R V SWLSL+AT    +G  IIS+F Y ML H E+F+SLW+VSIFSGLKW++G +H F
Sbjct: 248 RGVSSWLSLYATAAGGVGSAIISSFIYHMLKHGEQFVSLWVVSIFSGLKWLLGVSHVF 305



 Score = 25.0 bits (53), Expect(2) = 6e-37
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 368 HMLTVFKYPHA 400
           H L++FKYPHA
Sbjct: 323 HFLSIFKYPHA 333


>ref|XP_002326573.1| predicted protein [Populus trichocarpa] gi|222833895|gb|EEE72372.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  150 bits (380), Expect(2) = 1e-35
 Identities = 68/117 (58%), Positives = 88/117 (75%), Gaps = 1/117 (0%)
 Frame = +3

Query: 3   IGSLFCLPAGFFNVAWIFPPYIAAIVAASVVCNASHTHHLGVMVRGYSTSVESQHQFPQR 182
           +G+ FCLP GFFNV WIFPPYIAAI+A S V  ASHT  LG M+RG++  +  + QF  R
Sbjct: 178 VGAFFCLPTGFFNVHWIFPPYIAAIIAGSTVAMASHTRQLGHMIRGFTGPINQRKQFQLR 237

Query: 183 RSVGSWLSLHATTLSCLGGGIISTFTYRMLHHKE-KFLSLWLVSIFSGLKWIVGSAH 350
           R V SWLSL+AT   CLG  ++S F+Y+ML  +E +F++LW+VSIFSGLKW+VG +H
Sbjct: 238 RGVSSWLSLYATAAGCLGAALMSAFSYQMLRREERRFVALWVVSIFSGLKWLVGISH 294



 Score = 23.9 bits (50), Expect(2) = 1e-35
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 368 HMLTVFKYPHA 400
           H+L++F YPHA
Sbjct: 315 HLLSIFNYPHA 325


>gb|AAP45173.1| hypothetical protein SBB1_14t00005 [Solanum bulbocastanum]
          Length = 553

 Score =  147 bits (372), Expect(2) = 4e-35
 Identities = 67/116 (57%), Positives = 81/116 (69%)
 Frame = +3

Query: 3   IGSLFCLPAGFFNVAWIFPPYIAAIVAASVVCNASHTHHLGVMVRGYSTSVESQHQFPQR 182
           IG LFCLPAGFF   WIFPPYIAAIVAA+ + ++ H  HLG+MVRG   S   + QF  R
Sbjct: 180 IGGLFCLPAGFFKTRWIFPPYIAAIVAANTIVSSCHARHLGLMVRGLVGSPIRKSQFSDR 239

Query: 183 RSVGSWLSLHATTLSCLGGGIISTFTYRMLHHKEKFLSLWLVSIFSGLKWIVGSAH 350
           ++V SWLSLH+T   CLG  ++S FTY ML   + F SLW+VSIFSGL W +G  H
Sbjct: 240 KAVASWLSLHSTAAGCLGAALMSAFTYHMLRKSDSFTSLWVVSIFSGLIWFIGMVH 295



 Score = 25.4 bits (54), Expect(2) = 4e-35
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +2

Query: 362 KHHMLTVFKYPHA 400
           K H++++FKYPHA
Sbjct: 315 KTHVVSIFKYPHA 327


>ref|XP_002335493.1| predicted protein [Populus trichocarpa] gi|222834268|gb|EEE72745.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  145 bits (367), Expect = 3e-33
 Identities = 66/113 (58%), Positives = 85/113 (75%), Gaps = 1/113 (0%)
 Frame = +3

Query: 3   IGSLFCLPAGFFNVAWIFPPYIAAIVAASVVCNASHTHHLGVMVRGYSTSVESQHQFPQR 182
           +G+ FCLP GFFNV WIFPPYIAAI+A S V  ASHT  LG M+RG++  +  + QF  R
Sbjct: 172 VGAFFCLPTGFFNVHWIFPPYIAAIIAGSTVAMASHTRQLGHMIRGFTGPINQRKQFQLR 231

Query: 183 RSVGSWLSLHATTLSCLGGGIISTFTYRMLHHKE-KFLSLWLVSIFSGLKWIV 338
           R V SWLSL+AT   CLG  ++S F+Y+ML  +E +F++LW+VSIFSGLKW+V
Sbjct: 232 RGVSSWLSLYATAAGCLGAALMSAFSYQMLRREERRFVALWVVSIFSGLKWLV 284


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