BLASTX nr result
ID: Coptis23_contig00031966
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00031966 (478 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268444.1| PREDICTED: uncharacterized protein LOC100250... 169 2e-40 ref|XP_002519964.1| conserved hypothetical protein [Ricinus comm... 154 6e-37 ref|XP_002326573.1| predicted protein [Populus trichocarpa] gi|2... 150 1e-35 gb|AAP45173.1| hypothetical protein SBB1_14t00005 [Solanum bulbo... 147 4e-35 ref|XP_002335493.1| predicted protein [Populus trichocarpa] gi|2... 145 3e-33 >ref|XP_002268444.1| PREDICTED: uncharacterized protein LOC100250134 [Vitis vinifera] gi|296085169|emb|CBI28664.3| unnamed protein product [Vitis vinifera] Length = 540 Score = 169 bits (428), Expect(2) = 2e-40 Identities = 76/121 (62%), Positives = 92/121 (76%) Frame = +3 Query: 3 IGSLFCLPAGFFNVAWIFPPYIAAIVAASVVCNASHTHHLGVMVRGYSTSVESQHQFPQR 182 IG++FCLP+GFF WIFPPYI AIVAA VC ASHT HLG+M+RG++ S+ QF R Sbjct: 176 IGAIFCLPSGFFKTKWIFPPYIVAIVAAYTVCTASHTRHLGLMIRGFTGHPISKSQFSDR 235 Query: 183 RSVGSWLSLHATTLSCLGGGIISTFTYRMLHHKEKFLSLWLVSIFSGLKWIVGSAHAFL* 362 R V WLS+HAT+ CLG IISTFTY ML+ EKF+SLW+VSIFSGLKW++G H F+ Sbjct: 236 RGVAGWLSVHATSAGCLGAAIISTFTYHMLYPSEKFISLWIVSIFSGLKWLIGIFHIFMV 295 Query: 363 N 365 N Sbjct: 296 N 296 Score = 21.6 bits (44), Expect(2) = 2e-40 Identities = 7/20 (35%), Positives = 13/20 (65%) Frame = +2 Query: 341 VSPCFPLKHHMLTVFKYPHA 400 +S + H++++FKYP A Sbjct: 304 LSATYSTTPHVVSIFKYPQA 323 >ref|XP_002519964.1| conserved hypothetical protein [Ricinus communis] gi|223541010|gb|EEF42568.1| conserved hypothetical protein [Ricinus communis] Length = 556 Score = 154 bits (389), Expect(2) = 6e-37 Identities = 72/118 (61%), Positives = 87/118 (73%) Frame = +3 Query: 3 IGSLFCLPAGFFNVAWIFPPYIAAIVAASVVCNASHTHHLGVMVRGYSTSVESQHQFPQR 182 IG+ FCLP GFFNV WIFPPYIAAIVAAS+V ASHT L +MV+G++ QF R Sbjct: 188 IGAFFCLPTGFFNVTWIFPPYIAAIVAASIVATASHTRQLALMVKGFTGPNLQHSQFQTR 247 Query: 183 RSVGSWLSLHATTLSCLGGGIISTFTYRMLHHKEKFLSLWLVSIFSGLKWIVGSAHAF 356 R V SWLSL+AT +G IIS+F Y ML H E+F+SLW+VSIFSGLKW++G +H F Sbjct: 248 RGVSSWLSLYATAAGGVGSAIISSFIYHMLKHGEQFVSLWVVSIFSGLKWLLGVSHVF 305 Score = 25.0 bits (53), Expect(2) = 6e-37 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = +2 Query: 368 HMLTVFKYPHA 400 H L++FKYPHA Sbjct: 323 HFLSIFKYPHA 333 >ref|XP_002326573.1| predicted protein [Populus trichocarpa] gi|222833895|gb|EEE72372.1| predicted protein [Populus trichocarpa] Length = 548 Score = 150 bits (380), Expect(2) = 1e-35 Identities = 68/117 (58%), Positives = 88/117 (75%), Gaps = 1/117 (0%) Frame = +3 Query: 3 IGSLFCLPAGFFNVAWIFPPYIAAIVAASVVCNASHTHHLGVMVRGYSTSVESQHQFPQR 182 +G+ FCLP GFFNV WIFPPYIAAI+A S V ASHT LG M+RG++ + + QF R Sbjct: 178 VGAFFCLPTGFFNVHWIFPPYIAAIIAGSTVAMASHTRQLGHMIRGFTGPINQRKQFQLR 237 Query: 183 RSVGSWLSLHATTLSCLGGGIISTFTYRMLHHKE-KFLSLWLVSIFSGLKWIVGSAH 350 R V SWLSL+AT CLG ++S F+Y+ML +E +F++LW+VSIFSGLKW+VG +H Sbjct: 238 RGVSSWLSLYATAAGCLGAALMSAFSYQMLRREERRFVALWVVSIFSGLKWLVGISH 294 Score = 23.9 bits (50), Expect(2) = 1e-35 Identities = 7/11 (63%), Positives = 10/11 (90%) Frame = +2 Query: 368 HMLTVFKYPHA 400 H+L++F YPHA Sbjct: 315 HLLSIFNYPHA 325 >gb|AAP45173.1| hypothetical protein SBB1_14t00005 [Solanum bulbocastanum] Length = 553 Score = 147 bits (372), Expect(2) = 4e-35 Identities = 67/116 (57%), Positives = 81/116 (69%) Frame = +3 Query: 3 IGSLFCLPAGFFNVAWIFPPYIAAIVAASVVCNASHTHHLGVMVRGYSTSVESQHQFPQR 182 IG LFCLPAGFF WIFPPYIAAIVAA+ + ++ H HLG+MVRG S + QF R Sbjct: 180 IGGLFCLPAGFFKTRWIFPPYIAAIVAANTIVSSCHARHLGLMVRGLVGSPIRKSQFSDR 239 Query: 183 RSVGSWLSLHATTLSCLGGGIISTFTYRMLHHKEKFLSLWLVSIFSGLKWIVGSAH 350 ++V SWLSLH+T CLG ++S FTY ML + F SLW+VSIFSGL W +G H Sbjct: 240 KAVASWLSLHSTAAGCLGAALMSAFTYHMLRKSDSFTSLWVVSIFSGLIWFIGMVH 295 Score = 25.4 bits (54), Expect(2) = 4e-35 Identities = 8/13 (61%), Positives = 12/13 (92%) Frame = +2 Query: 362 KHHMLTVFKYPHA 400 K H++++FKYPHA Sbjct: 315 KTHVVSIFKYPHA 327 >ref|XP_002335493.1| predicted protein [Populus trichocarpa] gi|222834268|gb|EEE72745.1| predicted protein [Populus trichocarpa] Length = 284 Score = 145 bits (367), Expect = 3e-33 Identities = 66/113 (58%), Positives = 85/113 (75%), Gaps = 1/113 (0%) Frame = +3 Query: 3 IGSLFCLPAGFFNVAWIFPPYIAAIVAASVVCNASHTHHLGVMVRGYSTSVESQHQFPQR 182 +G+ FCLP GFFNV WIFPPYIAAI+A S V ASHT LG M+RG++ + + QF R Sbjct: 172 VGAFFCLPTGFFNVHWIFPPYIAAIIAGSTVAMASHTRQLGHMIRGFTGPINQRKQFQLR 231 Query: 183 RSVGSWLSLHATTLSCLGGGIISTFTYRMLHHKE-KFLSLWLVSIFSGLKWIV 338 R V SWLSL+AT CLG ++S F+Y+ML +E +F++LW+VSIFSGLKW+V Sbjct: 232 RGVSSWLSLYATAAGCLGAALMSAFSYQMLRREERRFVALWVVSIFSGLKWLV 284