BLASTX nr result

ID: Coptis23_contig00031955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031955
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333993.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
ref|XP_004143386.1| PREDICTED: uncharacterized protein LOC101210...   172   3e-41
ref|XP_002530344.1| conserved hypothetical protein [Ricinus comm...   151   5e-35
ref|XP_002530345.1| hypothetical protein RCOM_0293450 [Ricinus c...   137   1e-30
emb|CAN62038.1| hypothetical protein VITISV_021371 [Vitis vinifera]    91   1e-16

>ref|XP_002333993.1| predicted protein [Populus trichocarpa] gi|222839508|gb|EEE77845.1|
           predicted protein [Populus trichocarpa]
          Length = 642

 Score =  179 bits (455), Expect = 2e-43
 Identities = 83/121 (68%), Positives = 104/121 (85%)
 Frame = +2

Query: 47  KRRWRVYSNDVDYVLCDFVVISAGVLGTTEILFQSVRRGLHVSEKLGFGFSCNGNSCAYL 226
           KRRWRVY N++DY+  D+V++SAGVLGTTEILF+S  RGL +S+ LG GFSCNGN+ AY+
Sbjct: 255 KRRWRVYINEIDYITSDWVILSAGVLGTTEILFRSQMRGLRLSDTLGSGFSCNGNNLAYV 314

Query: 227 AGSSAPLAAYGLDKNQFSNIPFQDRPGPAISTSYTSSLGFTIQTAVLPTSFPYLLFKGIH 406
           AGS APL  YGL++ Q S IPFQDRPGP+IS+S+TSSLGFTIQ+A+LP ++PYLLF+GI 
Sbjct: 315 AGSPAPLNGYGLNRKQLSEIPFQDRPGPSISSSHTSSLGFTIQSAILPRAYPYLLFEGIT 374

Query: 407 T 409
           T
Sbjct: 375 T 375


>ref|XP_004143386.1| PREDICTED: uncharacterized protein LOC101210028 [Cucumis sativus]
           gi|449508456|ref|XP_004163317.1| PREDICTED:
           uncharacterized LOC101210028 [Cucumis sativus]
          Length = 1119

 Score =  172 bits (436), Expect = 3e-41
 Identities = 81/121 (66%), Positives = 99/121 (81%)
 Frame = +2

Query: 47  KRRWRVYSNDVDYVLCDFVVISAGVLGTTEILFQSVRRGLHVSEKLGFGFSCNGNSCAYL 226
           KRRW VY N++D++ CDFV++SAGV GTTEILF+S  RGL VSE LG GFSCNGN+ AYL
Sbjct: 255 KRRWSVYLNEIDFIACDFVILSAGVFGTTEILFRSQMRGLKVSEALGCGFSCNGNTVAYL 314

Query: 227 AGSSAPLAAYGLDKNQFSNIPFQDRPGPAISTSYTSSLGFTIQTAVLPTSFPYLLFKGIH 406
           AGS APL  YGLD+ +     F +RPGP+IS+SYTSSLGFTIQ+AVLP+++P LLFKG+ 
Sbjct: 315 AGSPAPLNGYGLDRERLWKKAFHERPGPSISSSYTSSLGFTIQSAVLPSAYPNLLFKGVT 374

Query: 407 T 409
           T
Sbjct: 375 T 375


>ref|XP_002530344.1| conserved hypothetical protein [Ricinus communis]
           gi|223530148|gb|EEF32060.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1153

 Score =  151 bits (382), Expect = 5e-35
 Identities = 77/121 (63%), Positives = 90/121 (74%)
 Frame = +2

Query: 47  KRRWRVYSNDVDYVLCDFVVISAGVLGTTEILFQSVRRGLHVSEKLGFGFSCNGNSCAYL 226
           +RRWRV +          +  +AGV GTTEILFQS  RGL +SE LG GFSCNGN+ AYL
Sbjct: 258 RRRWRVLN----------LFSTAGVFGTTEILFQSQLRGLTLSESLGSGFSCNGNTVAYL 307

Query: 227 AGSSAPLAAYGLDKNQFSNIPFQDRPGPAISTSYTSSLGFTIQTAVLPTSFPYLLFKGIH 406
           AGS+APL  YGLDK Q   IPF  RPGP+IS+SYT S+GFTIQTA+LP ++PYLLFKGI 
Sbjct: 308 AGSAAPLNGYGLDKEQMPKIPFHKRPGPSISSSYTYSMGFTIQTAILPRAYPYLLFKGIM 367

Query: 407 T 409
           T
Sbjct: 368 T 368


>ref|XP_002530345.1| hypothetical protein RCOM_0293450 [Ricinus communis]
           gi|223530149|gb|EEF32061.1| hypothetical protein
           RCOM_0293450 [Ricinus communis]
          Length = 1092

 Score =  137 bits (344), Expect = 1e-30
 Identities = 73/118 (61%), Positives = 82/118 (69%), Gaps = 20/118 (16%)
 Frame = +2

Query: 116 GVLGTTEILFQSVRRGLHVSEKLGFGFSCNGNSCAYLAGSSAPLAAYGLDKNQFSNIPFQ 295
           GV GTTEILFQS  RGL +S+ LG GFSCNGN+ AYLAGS+APL  YGLDK Q   IPF 
Sbjct: 218 GVFGTTEILFQSQMRGLMLSKTLGSGFSCNGNTVAYLAGSAAPLNGYGLDKKQMLEIPFH 277

Query: 296 DRPGPAISTSYTSSLGFTIQ--------------------TAVLPTSFPYLLFKGIHT 409
           +RPGP+IS+SYTSSLGFTIQ                    TAVLP ++PYLLFKGI T
Sbjct: 278 ERPGPSISSSYTSSLGFTIQVNHNAIVCLVTVFRLSRHHLTAVLPRAYPYLLFKGITT 335


>emb|CAN62038.1| hypothetical protein VITISV_021371 [Vitis vinifera]
          Length = 1123

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 53/124 (42%), Positives = 64/124 (51%)
 Frame = +2

Query: 38  KKLKRRWRVYSNDVDYVLCDFVVISAGVLGTTEILFQSVRRGLHVSEKLGFGFSCNGNSC 217
           +K +RRW V+ N+ DYVL DFV++SAGV GTTEILFQS  RGL +SE+LG GFSCNGN+ 
Sbjct: 257 RKTRRRWLVFFNETDYVLSDFVILSAGVFGTTEILFQSQMRGLKLSERLGSGFSCNGNN- 315

Query: 218 AYLAGSSAPLAAYGLDKNQFSNIPFQDRPGPAISTSYTSSLGFTIQTAVLPTSFPYLLFK 397
                                                          AVLP +FP+LLFK
Sbjct: 316 ----------------------------------------------GAVLPKAFPHLLFK 329

Query: 398 GIHT 409
           GI T
Sbjct: 330 GITT 333


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