BLASTX nr result

ID: Coptis23_contig00031950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031950
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523937.1| hydrolase, hydrolyzing O-glycosyl compounds,...   131   8e-33
gb|AAQ17461.1| beta-D-glucosidase [Gossypium hirsutum]                125   6e-32
ref|XP_002874024.1| glycosyl hydrolase family 3 protein [Arabido...   129   1e-31
ref|XP_003553336.1| PREDICTED: uncharacterized protein LOC100777...   129   2e-31
ref|XP_002278377.1| PREDICTED: lysosomal beta glucosidase-like i...   127   2e-31

>ref|XP_002523937.1| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus
           communis] gi|223536784|gb|EEF38424.1| hydrolase,
           hydrolyzing O-glycosyl compounds, putative [Ricinus
           communis]
          Length = 625

 Score =  131 bits (329), Expect(2) = 8e-33
 Identities = 60/80 (75%), Positives = 67/80 (83%)
 Frame = +3

Query: 3   ITKVSAQIKCVVAVVFGHPVVIEPYIQSIDALVVAWLPGSEGQGVAYVLFGDFGFHGRLA 182
           IT V   +KCVV VV G P+VIEP+I  IDALV AWLPGSEGQGVA VLFGD+GF G+L 
Sbjct: 529 ITNVCGSVKCVVVVVSGRPLVIEPHISPIDALVAAWLPGSEGQGVADVLFGDYGFTGKLP 588

Query: 183 RTWFKFVDQLPMNIGDAHYD 242
           RTWFK+VDQLPMN+GDAHYD
Sbjct: 589 RTWFKYVDQLPMNVGDAHYD 608



 Score = 34.3 bits (77), Expect(2) = 8e-33
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +1

Query: 244 DPLYPFGFGLLTEPTHQ 294
           DPL+P+GFGL TEPT Q
Sbjct: 608 DPLFPYGFGLTTEPTKQ 624


>gb|AAQ17461.1| beta-D-glucosidase [Gossypium hirsutum]
          Length = 628

 Score =  125 bits (313), Expect(2) = 6e-32
 Identities = 54/80 (67%), Positives = 66/80 (82%)
 Frame = +3

Query: 3   ITKVSAQIKCVVAVVFGHPVVIEPYIQSIDALVVAWLPGSEGQGVAYVLFGDFGFHGRLA 182
           I  V   +KCVV V+ G PVV++P++ S+DALV AWLPG+EGQGV+ VLFGD+GF G+LA
Sbjct: 532 IYNVCGSVKCVVVVISGRPVVVQPFVSSVDALVAAWLPGTEGQGVSDVLFGDYGFTGKLA 591

Query: 183 RTWFKFVDQLPMNIGDAHYD 242
           RTWFK VDQLPMN+GD HYD
Sbjct: 592 RTWFKTVDQLPMNVGDPHYD 611



 Score = 37.4 bits (85), Expect(2) = 6e-32
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +1

Query: 244 DPLYPFGFGLLTEPTHQ 294
           DPL+PFGFGL T+PTHQ
Sbjct: 611 DPLFPFGFGLTTKPTHQ 627


>ref|XP_002874024.1| glycosyl hydrolase family 3 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297319861|gb|EFH50283.1| glycosyl hydrolase
           family 3 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 630

 Score =  129 bits (323), Expect(2) = 1e-31
 Identities = 59/80 (73%), Positives = 67/80 (83%)
 Frame = +3

Query: 3   ITKVSAQIKCVVAVVFGHPVVIEPYIQSIDALVVAWLPGSEGQGVAYVLFGDFGFHGRLA 182
           I  V A +KCVV VV G PVV++PYI +IDALV AWLPG+EGQGVA VLFGD+GF G+LA
Sbjct: 537 IENVCASVKCVVVVVSGRPVVMQPYISNIDALVAAWLPGTEGQGVADVLFGDYGFTGKLA 596

Query: 183 RTWFKFVDQLPMNIGDAHYD 242
           RTWFK VDQLPMN+GD HYD
Sbjct: 597 RTWFKTVDQLPMNVGDPHYD 616



 Score = 32.7 bits (73), Expect(2) = 1e-31
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +1

Query: 244 DPLYPFGFGLLTEP 285
           DPLYPFGFGL+T P
Sbjct: 616 DPLYPFGFGLITNP 629


>ref|XP_003553336.1| PREDICTED: uncharacterized protein LOC100777415 [Glycine max]
          Length = 1770

 Score =  129 bits (323), Expect(2) = 2e-31
 Identities = 59/80 (73%), Positives = 65/80 (81%)
 Frame = +3

Query: 3    ITKVSAQIKCVVAVVFGHPVVIEPYIQSIDALVVAWLPGSEGQGVAYVLFGDFGFHGRLA 182
            I  V   IKCVV V+ G PVVIEPY+ S+DALV AWLPGSEGQGVA VLFGD+GF G+L 
Sbjct: 1671 IANVCGAIKCVVIVISGRPVVIEPYVDSVDALVAAWLPGSEGQGVADVLFGDYGFTGKLP 1730

Query: 183  RTWFKFVDQLPMNIGDAHYD 242
            RTWFK VDQLPMN+GD HYD
Sbjct: 1731 RTWFKTVDQLPMNVGDPHYD 1750



 Score = 32.0 bits (71), Expect(2) = 2e-31
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +1

Query: 244  DPLYPFGFGLLTEPT 288
            DPL+PFGFGL T+PT
Sbjct: 1750 DPLFPFGFGLSTKPT 1764


>ref|XP_002278377.1| PREDICTED: lysosomal beta glucosidase-like isoform 2 [Vitis
           vinifera]
          Length = 629

 Score =  127 bits (318), Expect(2) = 2e-31
 Identities = 57/80 (71%), Positives = 67/80 (83%)
 Frame = +3

Query: 3   ITKVSAQIKCVVAVVFGHPVVIEPYIQSIDALVVAWLPGSEGQGVAYVLFGDFGFHGRLA 182
           I+ V A +KCVV +V G PVVI+PY+  IDALV AWLPG+EGQGVA VLFGD+GF G+LA
Sbjct: 533 ISNVCAAVKCVVVIVSGRPVVIQPYLAKIDALVAAWLPGTEGQGVADVLFGDYGFTGKLA 592

Query: 183 RTWFKFVDQLPMNIGDAHYD 242
           RTWFK V+QLPMN+GD HYD
Sbjct: 593 RTWFKTVEQLPMNVGDPHYD 612



 Score = 33.9 bits (76), Expect(2) = 2e-31
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +1

Query: 244 DPLYPFGFGLLTEPTHQ 294
           DPL+PFGFGL T+PT Q
Sbjct: 612 DPLFPFGFGLTTKPTKQ 628


Top