BLASTX nr result

ID: Coptis23_contig00031934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031934
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271736.1| PREDICTED: endoglucanase 17 [Vitis vinifera]      107   8e-22
gb|AGE09591.1| CEL2-like protein, partial [Eucalyptus cladocalyx]     106   2e-21
ref|XP_002872847.1| glycosyl hydrolase family 9 protein [Arabido...   100   1e-19
ref|XP_002301487.1| glycosyl hydrolase family 9 [Populus trichoc...   100   2e-19
ref|XP_002320998.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19

>ref|XP_002271736.1| PREDICTED: endoglucanase 17 [Vitis vinifera]
          Length = 511

 Score =  107 bits (268), Expect = 8e-22
 Identities = 56/74 (75%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
 Frame = +2

Query: 86  LIFLCFFTS-LFLCNAFPPHQLQHHHNHKGAASHNYKDALTKSILFFEGQRSGMLPSNQR 262
           LI LCFFTS L LCNAF     QHHH H   A HNY+DALTKSILFFEGQRSG LPSNQR
Sbjct: 19  LILLCFFTSSLLLCNAF-----QHHH-HPRVARHNYRDALTKSILFFEGQRSGRLPSNQR 72

Query: 263 MTWRKNSGLSDGSA 304
           MTWR++SGLSDG+A
Sbjct: 73  MTWRRDSGLSDGAA 86


>gb|AGE09591.1| CEL2-like protein, partial [Eucalyptus cladocalyx]
          Length = 129

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
 Frame = +2

Query: 56  MAFXXXXXVPLIFLCFFTSLFLCNAFPPHQLQHHHNHKGA-ASHNYKDALTKSILFFEGQ 232
           + F     + L+  CFF SLFLCNA+ P  L+H H H+   ASHNY+DALTKSILFFEGQ
Sbjct: 3   LVFLRSFTLLLLLSCFFASLFLCNAYYP--LRHSHQHRPRFASHNYRDALTKSILFFEGQ 60

Query: 233 RSGMLPSNQRMTWRKNSGLSDGSA 304
           RSG LP +QR+TWR++SGLSDGSA
Sbjct: 61  RSGRLPRSQRVTWRRDSGLSDGSA 84


>ref|XP_002872847.1| glycosyl hydrolase family 9 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297318684|gb|EFH49106.1| glycosyl hydrolase
           family 9 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 511

 Score =  100 bits (249), Expect = 1e-19
 Identities = 55/76 (72%), Positives = 57/76 (75%), Gaps = 4/76 (5%)
 Frame = +2

Query: 89  IFLCFFTSLFLCNAF--PPHQL--QHHHNHKGAASHNYKDALTKSILFFEGQRSGMLPSN 256
           IFL FF   FLCN F  P   L   HHH H   A HNYKDALTKSILFFEGQRSG LPSN
Sbjct: 14  IFLSFF--FFLCNGFTYPTSSLFNTHHHRHH-VAKHNYKDALTKSILFFEGQRSGKLPSN 70

Query: 257 QRMTWRKNSGLSDGSA 304
           QRM+WRK+SGLSDGSA
Sbjct: 71  QRMSWRKDSGLSDGSA 86


>ref|XP_002301487.1| glycosyl hydrolase family 9 [Populus trichocarpa]
           gi|222843213|gb|EEE80760.1| glycosyl hydrolase family 9
           [Populus trichocarpa]
          Length = 520

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/70 (67%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
 Frame = +2

Query: 98  CFFTSLFLCNAFPPHQLQ--HHHNHKGAASHNYKDALTKSILFFEGQRSGMLPSNQRMTW 271
           CF TS   C+ FP H     HH  H   ASHNY+DALTKSILFFEGQRSG LPS+QRMTW
Sbjct: 16  CFATSFIACHGFPVHHNNPFHHRRHPRFASHNYRDALTKSILFFEGQRSGKLPSSQRMTW 75

Query: 272 RKNSGLSDGS 301
           R++SGL+DGS
Sbjct: 76  RRDSGLTDGS 85


>ref|XP_002320998.1| predicted protein [Populus trichocarpa] gi|222861771|gb|EEE99313.1|
           predicted protein [Populus trichocarpa]
           gi|347466573|gb|AEO97199.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466627|gb|AEO97226.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
          Length = 510

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 48/75 (64%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
 Frame = +2

Query: 86  LIFLCFFTSLFLCNAFPPHQLQ--HHHNHKGAASHNYKDALTKSILFFEGQRSGMLPSNQ 259
           ++F CF T L +C+ FP H     HH  H   ASHNY+DALTKSILFFEGQRSG LPS+Q
Sbjct: 12  VLFSCFATFL-VCHGFPVHHNNPFHHRRHPRFASHNYRDALTKSILFFEGQRSGKLPSSQ 70

Query: 260 RMTWRKNSGLSDGSA 304
           R+TWR++SGL+DGSA
Sbjct: 71  RITWRRDSGLTDGSA 85


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