BLASTX nr result

ID: Coptis23_contig00031900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031900
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002876131.1| hypothetical protein ARALYDRAFT_906586 [Arab...    64   1e-08
ref|NP_566963.1| uncharacterized protein [Arabidopsis thaliana] ...    59   4e-07
ref|XP_002271647.1| PREDICTED: uncharacterized protein LOC100247...    54   1e-05
emb|CBI40202.3| unnamed protein product [Vitis vinifera]               54   1e-05

>ref|XP_002876131.1| hypothetical protein ARALYDRAFT_906586 [Arabidopsis lyrata subsp.
           lyrata] gi|297321969|gb|EFH52390.1| hypothetical protein
           ARALYDRAFT_906586 [Arabidopsis lyrata subsp. lyrata]
          Length = 145

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/41 (68%), Positives = 32/41 (78%)
 Frame = +2

Query: 38  MWQVYALGGFLVGRWLWARWNERKAAKSDKEEPSGDPESPS 160
           +WQVYALGGFLV +W WARWNERK   SDK E +GD + PS
Sbjct: 91  LWQVYALGGFLVLKWAWARWNERKET-SDKNEATGDDDQPS 130


>ref|NP_566963.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4678952|emb|CAB41343.1| putative protein [Arabidopsis
           thaliana] gi|15450439|gb|AAK96513.1| AT3g52230/F4F15_340
           [Arabidopsis thaliana] gi|16974441|gb|AAL31224.1|
           AT3g52230/F4F15_340 [Arabidopsis thaliana]
           gi|21592837|gb|AAM64787.1| unknown [Arabidopsis
           thaliana] gi|332645397|gb|AEE78918.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 145

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/38 (65%), Positives = 31/38 (81%)
 Frame = +2

Query: 38  MWQVYALGGFLVGRWLWARWNERKAAKSDKEEPSGDPE 151
           +WQVYALGGFLV +W WARWNER   +SDK+E +GD +
Sbjct: 93  LWQVYALGGFLVLKWAWARWNERN-ERSDKKEATGDDD 129


>ref|XP_002271647.1| PREDICTED: uncharacterized protein LOC100247238 [Vitis vinifera]
          Length = 132

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
 Frame = +2

Query: 2   LEGDEGQQGGGN--MWQVYALGGFLVGRWLWARWNERKAAK-SDKEEPS 139
           LE +E         +WQVYALGGF++ +W WARWNER+  K +  EEPS
Sbjct: 80  LEAEESDNSSSPTVLWQVYALGGFIILKWAWARWNERRNKKGASDEEPS 128


>emb|CBI40202.3| unnamed protein product [Vitis vinifera]
          Length = 125

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
 Frame = +2

Query: 2   LEGDEGQQGGGN--MWQVYALGGFLVGRWLWARWNERKAAK-SDKEEPS 139
           LE +E         +WQVYALGGF++ +W WARWNER+  K +  EEPS
Sbjct: 73  LEAEESDNSSSPTVLWQVYALGGFIILKWAWARWNERRNKKGASDEEPS 121


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