BLASTX nr result

ID: Coptis23_contig00031888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031888
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW63453.1| hypothetical protein ZEAMMB73_169648 [Zea mays]         60   2e-07
ref|XP_002452712.1| hypothetical protein SORBIDRAFT_04g031170 [S...    60   2e-07
gb|ACN33264.1| unknown [Zea mays] gi|413923522|gb|AFW63454.1| hy...    60   2e-07
ref|XP_003530557.1| PREDICTED: ABC transporter B family member 2...    58   9e-07
dbj|BAD07905.1| putative MDR-like ABC transporter [Oryza sativa ...    55   4e-06

>gb|AFW63453.1| hypothetical protein ZEAMMB73_169648 [Zea mays]
          Length = 208

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = -3

Query: 100 VPFLKLFSFADSLDCILMAAGSVGACAHGVSAP 2
           VPFLKLFSFAD  DC+LMA GS+GACAHG S P
Sbjct: 29  VPFLKLFSFADRWDCVLMAVGSLGACAHGASVP 61


>ref|XP_002452712.1| hypothetical protein SORBIDRAFT_04g031170 [Sorghum bicolor]
           gi|241932543|gb|EES05688.1| hypothetical protein
           SORBIDRAFT_04g031170 [Sorghum bicolor]
          Length = 1260

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = -3

Query: 100 VPFLKLFSFADSLDCILMAAGSVGACAHGVSAP 2
           VPFLKLFSFAD  DC+LMA GS+GACAHG S P
Sbjct: 32  VPFLKLFSFADRWDCVLMAVGSLGACAHGASVP 64


>gb|ACN33264.1| unknown [Zea mays] gi|413923522|gb|AFW63454.1| hypothetical protein
           ZEAMMB73_169648 [Zea mays]
          Length = 1262

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = -3

Query: 100 VPFLKLFSFADSLDCILMAAGSVGACAHGVSAP 2
           VPFLKLFSFAD  DC+LMA GS+GACAHG S P
Sbjct: 29  VPFLKLFSFADRWDCVLMAVGSLGACAHGASVP 61


>ref|XP_003530557.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1247

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/33 (75%), Positives = 27/33 (81%)
 Frame = -3

Query: 100 VPFLKLFSFADSLDCILMAAGSVGACAHGVSAP 2
           VPFLKLFSFAD  DC+LMA G+VGAC HG S P
Sbjct: 20  VPFLKLFSFADFYDCVLMAIGTVGACVHGASVP 52


>dbj|BAD07905.1| putative MDR-like ABC transporter [Oryza sativa Japonica Group]
           gi|41053279|dbj|BAD07705.1| putative MDR-like ABC
           transporter [Oryza sativa Japonica Group]
          Length = 653

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/33 (75%), Positives = 27/33 (81%)
 Frame = -3

Query: 100 VPFLKLFSFADSLDCILMAAGSVGACAHGVSAP 2
           VPFLKLFSFAD  D +LMA GS+GACAHG S P
Sbjct: 35  VPFLKLFSFADRWDYVLMAVGSLGACAHGASVP 67


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