BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031814
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28186.3| unnamed protein product [Vitis vinifera]              117   8e-25
ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
ref|NP_194969.2| pentatricopeptide repeat-containing protein [Ar...    97   1e-18
emb|CAA22570.1| putative protein [Arabidopsis thaliana] gi|72701...    97   1e-18
ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containi...    96   2e-18

>emb|CBI28186.3| unnamed protein product [Vitis vinifera]
          Length = 760

 Score =  117 bits (294), Expect = 8e-25
 Identities = 53/77 (68%), Positives = 64/77 (83%)
 Frame = -1

Query: 321 GEWDKAAKIRKGMRERGVKKEVGFSWVDVGDTDGSMYMHGFSSDDKSHAQSKEIYRMVEF 142
           GEW+K AKIRKGMRERGV+KE+GFSWVDVGD DGS+Y+HGFSSDDK H QS+EIYRM E 
Sbjct: 670 GEWEKVAKIRKGMRERGVRKEIGFSWVDVGDADGSLYLHGFSSDDKFHPQSEEIYRMAET 729

Query: 141 LGSVMASLKREQMELLL 91
           LG  M  L++E+   ++
Sbjct: 730 LGLEMKFLEKERKRKIM 746


>ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial [Vitis vinifera]
          Length = 773

 Score =  117 bits (293), Expect = 1e-24
 Identities = 53/72 (73%), Positives = 62/72 (86%)
 Frame = -1

Query: 321 GEWDKAAKIRKGMRERGVKKEVGFSWVDVGDTDGSMYMHGFSSDDKSHAQSKEIYRMVEF 142
           GEW+K AKIRKGMRERGV+KE+GFSWVDVGD DGS+Y+HGFSSDDK H QS+EIYRM E 
Sbjct: 693 GEWEKVAKIRKGMRERGVRKEIGFSWVDVGDADGSLYLHGFSSDDKFHPQSEEIYRMAET 752

Query: 141 LGSVMASLKREQ 106
           LG  M  L++E+
Sbjct: 753 LGLEMKFLEKER 764


>ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g32430, mitochondrial; Flags: Precursor
           gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis
           thaliana] gi|110742925|dbj|BAE99358.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332660658|gb|AEE86058.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/64 (68%), Positives = 52/64 (81%)
 Frame = -1

Query: 318 EWDKAAKIRKGMRERGVKKEVGFSWVDVGDTDGSMYMHGFSSDDKSHAQSKEIYRMVEFL 139
           EWDKAA+IRK MR++ V KE GFSW+DVGDT+GS+ M GFSS DKSH +S EIYRMVE +
Sbjct: 692 EWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEII 751

Query: 138 GSVM 127
           G  M
Sbjct: 752 GLEM 755


>emb|CAA22570.1| putative protein [Arabidopsis thaliana] gi|7270147|emb|CAB79960.1|
           putative protein [Arabidopsis thaliana]
          Length = 688

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/64 (68%), Positives = 52/64 (81%)
 Frame = -1

Query: 318 EWDKAAKIRKGMRERGVKKEVGFSWVDVGDTDGSMYMHGFSSDDKSHAQSKEIYRMVEFL 139
           EWDKAA+IRK MR++ V KE GFSW+DVGDT+GS+ M GFSS DKSH +S EIYRMVE +
Sbjct: 617 EWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEII 676

Query: 138 GSVM 127
           G  M
Sbjct: 677 GLEM 680


>ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Cucumis sativus]
          Length = 781

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 44/80 (55%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
 Frame = -1

Query: 321 GEWDKAAKIRKGMRERGVKKEVGFSWVDVGDTDGS-MYMHGFSSDDKSHAQSKEIYRMVE 145
           G+W+K AK+RK MRERGV KE+GFSWVDVG+   S +Y+HGFSS D SH QS+EI+RM +
Sbjct: 688 GDWEKVAKVRKEMRERGVMKEIGFSWVDVGNFGASNLYLHGFSSGDVSHPQSEEIFRMAK 747

Query: 144 FLGSVMASLKREQMELLLNI 85
           ++G+ M  LK  + E  +++
Sbjct: 748 YMGAEMKFLKDRERECHISV 767