BLASTX nr result
ID: Coptis23_contig00031781
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00031781
(572 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16176.3| unnamed protein product [Vitis vinifera] 193 1e-47
ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat... 193 1e-47
ref|XP_002298371.1| predicted protein [Populus trichocarpa] gi|2... 189 3e-46
ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat... 185 4e-45
ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat... 172 5e-41
>emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 193 bits (491), Expect = 1e-47
Identities = 97/188 (51%), Positives = 134/188 (71%), Gaps = 4/188 (2%)
Frame = +1
Query: 16 GLIVKELFELMFIAFNKCGFGYESSSGFDVLVQTFVLNKRVFEAVYVVKAMRGCGLVPEV 195
GL + LFE ++ KC F ++ GFD+L+QT+V N+R + + VV+ M CG++P++
Sbjct: 123 GLNPEGLFESFLDSYRKCNFS--TTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQI 180
Query: 196 RSVSTVLNGLVRVRRFEMVLDVFYEVYRIGVRLDVYVYTSVVRSFCELKDYVRAKVIVDE 375
R++S VLNGL+R+R+F M L +F E+ G+R DVYVYT+VVRS CELKD++RA+ ++
Sbjct: 181 RTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGR 240
Query: 376 MEMN----SVVACNVLIHGLCKNGRVGEAVEVKNVLGCRGLKADVVTYCTLVLGLCKVFD 543
ME + SV NV I GLCKN RV EAVE+KN+L +GL+ADV TYCTLVLGLCKV +
Sbjct: 241 MESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEE 300
Query: 544 LDLAVEMM 567
+ EMM
Sbjct: 301 FEAGEEMM 308
Score = 65.5 bits (158), Expect = 6e-09
Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Frame = +1
Query: 22 IVKELFELMFIAFNKCGFGYESSSGFDVLVQTFVL-------NKRVFEAVYVVKAMRGCG 180
+V+ L EL + G SSG D+ V T+ + N+RV+EAV + + G
Sbjct: 221 VVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKG 280
Query: 181 LVPEVRSVSTVLNGLVRVRRFEMVLDVFYEVYRIGVRLDVYVYTSVVRSFCELKDYVRAK 360
L +V + T++ GL +V FE ++ E+ G +++V + + A
Sbjct: 281 LRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAF 340
Query: 361 VIVDEMEM----NSVVACNVLIHGLCKNGRVGEAVEVKNVLGCRGLKADVVTYCTLVLGL 528
+V++++ S+ N LI+ +CK+G++ EA + N +G +GL + VTY L+
Sbjct: 341 DLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSF 400
Query: 529 CKVFDLDLAVEMM 567
CK LD+A+ +
Sbjct: 401 CKRGKLDVALHFL 413
Score = 62.8 bits (151), Expect = 4e-08
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Frame = +1
Query: 97 FDVLVQTFVLNKRVFEAVYVVKAMRGCGLVPEVRSVSTVLNGLVRVRRFEMVLDVFYEVY 276
++ L+ + + ++ EA + M GL P + S +++ + + ++ L ++
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT 417
Query: 277 RIGVRLDVYVYTSVVRSFCELKDYVRAKVIVDEMEMN----SVVACNVLIHGLCKNGRVG 444
+G++ VY Y+S++ C+L AK + DEM N +VV LI G CK G +
Sbjct: 418 EVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELH 477
Query: 445 EAVEVKNVLGCRGLKADVVTYCTLVLGLC 531
A + + + +G+ + T+ L+ GLC
Sbjct: 478 NAFRLYHEMTGKGISPNTYTFTALISGLC 506
Score = 60.8 bits (146), Expect = 1e-07
Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 12/162 (7%)
Frame = +1
Query: 106 LVQTFVLNKRVFEAVYVVKAMRGCGLVPEVRSVSTVLNGLVRVRRFEMVLDVFYEVYRIG 285
L+ + + A + M G G+ P + + +++GL R +F E+
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525
Query: 286 VRLDVYVYTSVVRSFCELKDYVRAKVIVDEMEMNSVV----ACNVLIHGLCKNGRVGEAV 453
V + Y ++ C+ + VRA ++DEM +V LI GLC GRV EA
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585
Query: 454 EVKNVL--------GCRGLKADVVTYCTLVLGLCKVFDLDLA 555
E N L G +VVTY L+ GLCK+ +D A
Sbjct: 586 EFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKA 627
Score = 58.5 bits (140), Expect = 7e-07
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Frame = +1
Query: 178 GLVPEVRSVSTVLNGLVRVRRFEMVLDVFYEVYRIGVRLDVYVYTSVVRSFCELKDYVRA 357
GL P V +++++G + +++E+ G+ + Y +T+++ C A
Sbjct: 455 GLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEA 514
Query: 358 KVIVDEM-EMNSV---VACNVLIHGLCKNGRVGEAVEVKNVLGCRGLKADVVTYCTLVLG 525
+ EM E N + V NVLI G CK G A E+ + + +GL D TY L+ G
Sbjct: 515 NKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISG 574
Query: 526 LCKVFDLDLAVEMM 567
LC + A E M
Sbjct: 575 LCSTGRVSEAREFM 588
>ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 193 bits (491), Expect = 1e-47
Identities = 97/188 (51%), Positives = 134/188 (71%), Gaps = 4/188 (2%)
Frame = +1
Query: 16 GLIVKELFELMFIAFNKCGFGYESSSGFDVLVQTFVLNKRVFEAVYVVKAMRGCGLVPEV 195
GL + LFE ++ KC F ++ GFD+L+QT+V N+R + + VV+ M CG++P++
Sbjct: 123 GLNPEGLFESFLDSYRKCNFS--TTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQI 180
Query: 196 RSVSTVLNGLVRVRRFEMVLDVFYEVYRIGVRLDVYVYTSVVRSFCELKDYVRAKVIVDE 375
R++S VLNGL+R+R+F M L +F E+ G+R DVYVYT+VVRS CELKD++RA+ ++
Sbjct: 181 RTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGR 240
Query: 376 MEMN----SVVACNVLIHGLCKNGRVGEAVEVKNVLGCRGLKADVVTYCTLVLGLCKVFD 543
ME + SV NV I GLCKN RV EAVE+KN+L +GL+ADV TYCTLVLGLCKV +
Sbjct: 241 MESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEE 300
Query: 544 LDLAVEMM 567
+ EMM
Sbjct: 301 FEAGEEMM 308
Score = 65.5 bits (158), Expect = 6e-09
Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Frame = +1
Query: 22 IVKELFELMFIAFNKCGFGYESSSGFDVLVQTFVL-------NKRVFEAVYVVKAMRGCG 180
+V+ L EL + G SSG D+ V T+ + N+RV+EAV + + G
Sbjct: 221 VVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKG 280
Query: 181 LVPEVRSVSTVLNGLVRVRRFEMVLDVFYEVYRIGVRLDVYVYTSVVRSFCELKDYVRAK 360
L +V + T++ GL +V FE ++ E+ G +++V + + A
Sbjct: 281 LRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAF 340
Query: 361 VIVDEMEM----NSVVACNVLIHGLCKNGRVGEAVEVKNVLGCRGLKADVVTYCTLVLGL 528
+V++++ S+ N LI+ +CK+G++ EA + N +G +GL + VTY L+
Sbjct: 341 DLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSF 400
Query: 529 CKVFDLDLAVEMM 567
CK LD+A+ +
Sbjct: 401 CKRGKLDVALHFL 413
Score = 62.8 bits (151), Expect = 4e-08
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Frame = +1
Query: 97 FDVLVQTFVLNKRVFEAVYVVKAMRGCGLVPEVRSVSTVLNGLVRVRRFEMVLDVFYEVY 276
++ L+ + + ++ EA + M GL P + S +++ + + ++ L ++
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT 417
Query: 277 RIGVRLDVYVYTSVVRSFCELKDYVRAKVIVDEMEMN----SVVACNVLIHGLCKNGRVG 444
+G++ VY Y+S++ C+L AK + DEM N +VV LI G CK G +
Sbjct: 418 EVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELH 477
Query: 445 EAVEVKNVLGCRGLKADVVTYCTLVLGLC 531
A + + + +G+ + T+ L+ GLC
Sbjct: 478 NAFRLYHEMTGKGISPNTYTFTALISGLC 506
Score = 58.5 bits (140), Expect = 7e-07
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Frame = +1
Query: 178 GLVPEVRSVSTVLNGLVRVRRFEMVLDVFYEVYRIGVRLDVYVYTSVVRSFCELKDYVRA 357
GL P V +++++G + +++E+ G+ + Y +T+++ C A
Sbjct: 455 GLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEA 514
Query: 358 KVIVDEM-EMNSV---VACNVLIHGLCKNGRVGEAVEVKNVLGCRGLKADVVTYCTLVLG 525
+ EM E N + V NVLI G CK G A E+ + + +GL D TY L+ G
Sbjct: 515 NKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISG 574
Query: 526 LCKVFDLDLAVEMM 567
LC + A E M
Sbjct: 575 LCSTGRVSEAREFM 588
Score = 56.6 bits (135), Expect = 3e-06
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 4/156 (2%)
Frame = +1
Query: 106 LVQTFVLNKRVFEAVYVVKAMRGCGLVPEVRSVSTVLNGLVRVRRFEMVLDVFYEVYRIG 285
L+ + + A + M G G+ P + + +++GL R +F E+
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525
Query: 286 VRLDVYVYTSVVRSFCELKDYVRAKVIVDEMEMNSVV----ACNVLIHGLCKNGRVGEAV 453
V + Y ++ C+ + VRA ++DEM +V LI GLC GRV EA
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585
Query: 454 EVKNVLGCRGLKADVVTYCTLVLGLCKVFDLDLAVE 561
E N L K + + + L+ G CK LD A++
Sbjct: 586 EFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALD 621
>ref|XP_002298371.1| predicted protein [Populus trichocarpa] gi|222845629|gb|EEE83176.1|
predicted protein [Populus trichocarpa]
Length = 915
Score = 189 bits (480), Expect = 3e-46
Identities = 95/186 (51%), Positives = 135/186 (72%), Gaps = 2/186 (1%)
Frame = +1
Query: 16 GLIVKELFELMFIAFNKCGFGYESSSGFDVLVQTFVLNKRVFEAVYVVKAMRGCGLVPEV 195
GL +E+FE + F KC F SS GFD+L+Q++V KR+F++V + + MR C L+P+V
Sbjct: 136 GLDPREVFEALLDCFEKCDF--ISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQV 193
Query: 196 RSVSTVLNGLVRVRRFEMVLDVFYEVYRIGVRLDVYVYTSVVRSFCELKDYVRAKVIVDE 375
R++ VLNGL ++RR +MVL +F E+ +G+R D+Y+Y +V+RSFCELK++ +AK ++
Sbjct: 194 RTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQR 253
Query: 376 MEMN--SVVACNVLIHGLCKNGRVGEAVEVKNVLGCRGLKADVVTYCTLVLGLCKVFDLD 549
ME + +VV NVLIHGLCKN RV EAVE+KN L +GL A VTYCTLVLGLCKV + +
Sbjct: 254 MESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFE 313
Query: 550 LAVEMM 567
+ +M
Sbjct: 314 VGAGVM 319
Score = 67.0 bits (162), Expect = 2e-09
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Frame = +1
Query: 97 FDVLVQTFVLNKRVFEAVYVVKAMRGCGLVPEVRSVSTVLNGLVRVRRFEMVLDVFYEVY 276
++VL+ NKRV+EAV + + GL + T++ GL +V+ FE+ V E+
Sbjct: 264 YNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMI 323
Query: 277 RIGVRLDVYVYTSVVRSFCELKDYVRAKVIVDEME----MNSVVACNVLIHGLCKNGRVG 444
+G +S+V V A +V+ ++ M S+ N LI+ LCK+G+
Sbjct: 324 ELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFD 383
Query: 445 EAVEVKNVLGCRGLKADVVTYCTLVLGLCKVFDLDLAVEMM 567
EA + +G +GL A+ VTY L+ C+ LD A+ +
Sbjct: 384 EAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFL 424
Score = 60.1 bits (144), Expect = 3e-07
Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Frame = +1
Query: 154 VVKAMRGCGLVPEVRSVSTVLNGLVRVRRFEMVLDVFYEVYRIGVRLDVYVYTSVVRSFC 333
V+ M G VP ++S+++ GL R + D+ V ++G ++VY +++ S C
Sbjct: 318 VMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLC 377
Query: 334 ELKDYVRAKVIVDEMEMNSV----VACNVLIHGLCKNGRVGEAVEVKNVLGCRGLKADVV 501
+ + A+++ EM + V ++LI C+ G++ A+ + G+K V
Sbjct: 378 KDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVY 437
Query: 502 TYCTLVLGLCKVFDLDLAV 558
Y +L+ G CK+ +L AV
Sbjct: 438 PYNSLINGHCKLGNLSAAV 456
Score = 55.1 bits (131), Expect = 8e-06
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Frame = +1
Query: 178 GLVPEVRSVSTVLNGLVRVRRFEMVLDVFYEVYRIGVRLDVYVYTSVVRSFCELKDYVRA 357
GL P V S +++++G + +++E+ G+ + Y +T+++ + A
Sbjct: 466 GLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDA 525
Query: 358 KVIVDEM----EMNSVVACNVLIHGLCKNGRVGEAVEVKNVLGCRGLKADVVTYCTLVLG 525
+ DEM M + V NV+I G CK G +A E+ N + +GL D TY L+
Sbjct: 526 FRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISS 585
Query: 526 LC 531
LC
Sbjct: 586 LC 587
>ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 185 bits (470), Expect = 4e-45
Identities = 96/188 (51%), Positives = 134/188 (71%), Gaps = 4/188 (2%)
Frame = +1
Query: 16 GLIVKELFELMFIAFNKCGFGYESSSGFDVLVQTFVLNKRVFEAVYVVKAMRGCGLVPEV 195
GL ++FE F ++ K + + SSSGFD+L+Q +V NKRV + V VV MR GL+PEV
Sbjct: 133 GLNPHQIFENFFESYKK--YKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEV 190
Query: 196 RSVSTVLNGLVRVRRFEMVLDVFYEVYRIGVRLDVYVYTSVVRSFCELKDYVRAKVIVDE 375
R++S +LN L R+R+F VL++F + GV+ D Y+YT VV+ CELKD+ +AK I+++
Sbjct: 191 RTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQ 250
Query: 376 MEMN----SVVACNVLIHGLCKNGRVGEAVEVKNVLGCRGLKADVVTYCTLVLGLCKVFD 543
E N S+V NV I+GLCK+ RV EAVEVK LG +GLKAD+VTYCTLVLGLC++ +
Sbjct: 251 AEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQE 310
Query: 544 LDLAVEMM 567
++ +EMM
Sbjct: 311 FEVGMEMM 318
Score = 61.2 bits (147), Expect = 1e-07
Identities = 41/157 (26%), Positives = 83/157 (52%), Gaps = 4/157 (2%)
Frame = +1
Query: 97 FDVLVQTFVLNKRVFEAVYVVKAMRGCGLVPEVRSVSTVLNGLVRVRRFEMVLDVFYEVY 276
++V + +KRV+EAV V +++ GL ++ + T++ GL R++ FE+ +++ E+
Sbjct: 263 YNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMI 322
Query: 277 RIGVRLDVYVYTSVVRSFCELKDYVRAKVIVDEMEMNSVV----ACNVLIHGLCKNGRVG 444
+G + ++ ++ A +++++ VV N +I+ LCK G++
Sbjct: 323 ELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLE 382
Query: 445 EAVEVKNVLGCRGLKADVVTYCTLVLGLCKVFDLDLA 555
EA + +V+ RGL + VTY L+ G + LD+A
Sbjct: 383 EAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVA 419
Score = 59.7 bits (143), Expect = 3e-07
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 7/183 (3%)
Frame = +1
Query: 40 ELMFIAFNK---CGFGYESSSGFDVLVQTFVLNKRVFEAVYVVKAMRGCGLVPEVRSVST 210
++ F FNK CG S ++ ++ ++ A + K M GL P V + ++
Sbjct: 417 DVAFYYFNKMIECGISATVYS-YNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTS 475
Query: 211 VLNGLVRVRRFEMVLDVFYEVYRIGVRLDVYVYTSVVRSFCELKDYVRAKVIVDEME--- 381
+++G + +++E+ G+ + +T+++ C++ A + DEM
Sbjct: 476 LISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELK 535
Query: 382 -MNSVVACNVLIHGLCKNGRVGEAVEVKNVLGCRGLKADVVTYCTLVLGLCKVFDLDLAV 558
+ + V NVLI G C+ G A E+ + + +GL D TY L+ GLC + A
Sbjct: 536 ILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAK 595
Query: 559 EMM 567
E +
Sbjct: 596 EFI 598
Score = 57.8 bits (138), Expect = 1e-06
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 12/186 (6%)
Frame = +1
Query: 16 GLIVKELFELMFIAFNKCG--------FGYESSSGFDVLVQTFVLNKRVFEAVYVVKAMR 171
GLI E F NK G F Y S ++ + ++ EA + M
Sbjct: 339 GLIKMGSIEGAFELLNKVGKLGVVPNLFVYNS------MINSLCKTGKLEEAELLFSVMA 392
Query: 172 GCGLVPEVRSVSTVLNGLVRVRRFEMVLDVFYEVYRIGVRLDVYVYTSVVRSFCELKDYV 351
GL P + + +++G R + ++ F ++ G+ VY Y S++ C+
Sbjct: 393 ERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMK 452
Query: 352 RAKVIVDEMEMN----SVVACNVLIHGLCKNGRVGEAVEVKNVLGCRGLKADVVTYCTLV 519
A+++ EM +V LI G CK+G V +A ++ + + +G+ + VT+ L+
Sbjct: 453 MAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALI 512
Query: 520 LGLCKV 537
GLC++
Sbjct: 513 CGLCQI 518
>ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 172 bits (435), Expect = 5e-41
Identities = 92/184 (50%), Positives = 126/184 (68%), Gaps = 4/184 (2%)
Frame = +1
Query: 28 KELFELMFIAFNKCGFGYESSSGFDVLVQTFVLNKRVFEAVYVVKAMRGCGLVPEVRSVS 207
K +F ++ +C F S+ GF++LVQ +VL+ R+F+AV +VK M L+PEVR++S
Sbjct: 137 KCVFSHFLDSYKRCKFS--STLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLS 194
Query: 208 TVLNGLVRVRRFEMVLDVFYEVYRIGVRLDVYVYTSVVRSFCELKDYVRAKVIVDEMEMN 387
+LNGL++VR+F V ++F E GVR D Y ++VVRS CELKD++RAK + ME N
Sbjct: 195 ALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEAN 254
Query: 388 ----SVVACNVLIHGLCKNGRVGEAVEVKNVLGCRGLKADVVTYCTLVLGLCKVFDLDLA 555
S+V NVLIHGLCK RV EAVEVK LG +GL ADVVTYCTLVLG C++ +
Sbjct: 255 GFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAG 314
Query: 556 VEMM 567
+++M
Sbjct: 315 IQLM 318
Score = 60.8 bits (146), Expect = 1e-07
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Frame = +1
Query: 166 MRGCGLVPEVRSVSTVLNGLVRVRRFEMVLDVFYEVYRIGVRLDVYVYTSVVRSFCELKD 345
M G+ P + +++++G + + + ++ ++ G+ +VY +T+++ C
Sbjct: 461 MTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNK 520
Query: 346 YVRAKVIVDEMEMNSV----VACNVLIHGLCKNGRVGEAVEVKNVLGCRGLKADVVTYCT 513
A + DE+ + V NVLI G C++G++ +A E+ + +GL D TY
Sbjct: 521 MAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRP 580
Query: 514 LVLGLC 531
L+ GLC
Sbjct: 581 LISGLC 586
Score = 59.3 bits (142), Expect = 4e-07
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Frame = +1
Query: 160 KAMRGCGLVPEVRSVSTVLNGLVRVRRFEMVLDVFYEVYRIGVRLDVYVYTSVVRSFCEL 339
K M+ + P + L+ L + + + + + + + G+ + + ++R FC+L
Sbjct: 739 KRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKL 797
Query: 340 KDYVRAKVIVDEMEMNSV----VACNVLIHGLCKNGRVGEAVEVKNVLGCRGLKADVVTY 507
+ A ++ EM N + V + LI+ C++G VG +V++ + + RGL+ D+V Y
Sbjct: 798 GRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAY 857
Query: 508 CTLVLGLCKVFDLDLAVEM 564
L+ G C +LD A E+
Sbjct: 858 NLLIYGCCVNGELDKAFEL 876
Score = 58.5 bits (140), Expect = 7e-07
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 46/224 (20%)
Frame = +1
Query: 22 IVKELFELMFIAFNKCGFGYESSSGFDVLVQTFVL-------NKRVFEAVYVVKAMRGCG 180
+V+ + EL K + ++GFD+ + T+ + RV EAV V +++ G G
Sbjct: 231 VVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKG 290
Query: 181 LVPEVRSVSTVLNGLVRVRRFE--------MV-----------------------LDVFY 267
L +V + T++ G R+++FE MV +D Y
Sbjct: 291 LAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAY 350
Query: 268 E----VYRIGVRLDVYVYTSVVRSFCELKDYVRAKVIVDEMEMNSV----VACNVLIHGL 423
E V R G +++VY +++ S C+ D +A+++ M + ++ + ++LI
Sbjct: 351 ELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSF 410
Query: 424 CKNGRVGEAVEVKNVLGCRGLKADVVTYCTLVLGLCKVFDLDLA 555
C++GR+ A+ + + G+ V Y +L+ G CK DL A
Sbjct: 411 CRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAA 454
Score = 57.8 bits (138), Expect = 1e-06
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Frame = +1
Query: 97 FDVLVQTFVLNKRVFEAVYVVKAMRGCGLVPEVRSVSTVLNGLVRVRRFEMVLDVFYEVY 276
+ +L+ +F + R+ A+ M G+ V + ++++NG + +F E+
Sbjct: 403 YSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMT 462
Query: 277 RIGVRLDVYVYTSVVRSFCELKDYVRAKVIVDEMEMN----SVVACNVLIHGLCKNGRVG 444
GV +TS++ +C+ +A + ++M N +V LI GLC ++
Sbjct: 463 NKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMA 522
Query: 445 EAVEVKNVLGCRGLKADVVTYCTLVLGLCKVFDLDLAVEMM 567
EA E+ + L R +K VTY L+ G C+ +D A E++
Sbjct: 523 EASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELL 563