BLASTX nr result

ID: Coptis23_contig00031763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031763
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266564.2| PREDICTED: uncharacterized protein LOC100266...   143   2e-32
emb|CAN71578.1| hypothetical protein VITISV_003228 [Vitis vinifera]   136   2e-30
ref|XP_002522574.1| catalytic, putative [Ricinus communis] gi|22...   131   8e-29
ref|XP_002317425.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28
ref|XP_003524964.1| PREDICTED: uncharacterized protein LOC100790...   124   8e-27

>ref|XP_002266564.2| PREDICTED: uncharacterized protein LOC100266871 [Vitis vinifera]
          Length = 460

 Score =  143 bits (361), Expect = 2e-32
 Identities = 85/159 (53%), Positives = 101/159 (63%), Gaps = 10/159 (6%)
 Frame = -3

Query: 500 SAPLIQARYNNTPNFKLRNG-NGXXXXXXXXXXXSTIDFRP------ASLFNF---FNFS 351
           +A LI AR   +P  +L+NG +G           S+    P       S FN      FS
Sbjct: 3   TASLIHARCCYSPRLRLKNGGHGHGHVGSSSHSSSSSSSSPPSSSDSCSSFNHRQGLTFS 62

Query: 350 GLTSFYKNTDLKIQGMSSSSTQGNVARPKSAKKLRDEPDHLLVLVHGIFASPNDWIYVEA 171
           G+ S +K+  L+ Q MS+  TQGN A P+     + EPDHLLVLVHGI ASP+DW Y EA
Sbjct: 63  GINSTWKHKSLRAQAMST--TQGNAASPRGFMHGKYEPDHLLVLVHGILASPSDWTYAEA 120

Query: 170 ELKKRLGSNFLIYASSSNTYTKTFGGIDGAGRRLADEVS 54
           ELKKRLG NFLIY SSSNTYTKTFGGIDGAG+RLADEV+
Sbjct: 121 ELKKRLGRNFLIYVSSSNTYTKTFGGIDGAGKRLADEVT 159


>emb|CAN71578.1| hypothetical protein VITISV_003228 [Vitis vinifera]
          Length = 258

 Score =  136 bits (343), Expect = 2e-30
 Identities = 81/151 (53%), Positives = 97/151 (64%), Gaps = 3/151 (1%)
 Frame = -3

Query: 500 SAPLIQARYNNTPNFKLRNGNGXXXXXXXXXXXSTIDFR--PASLFNFFNFSGL-TSFYK 330
           +A LI AR   +P   L+NG             S+      P+S  +  +F+    S +K
Sbjct: 3   TASLIHARCCYSPRLXLKNGGHGHGHVGSSSHSSSSSSSSPPSSSDSCSSFNHXKNSTWK 62

Query: 329 NTDLKIQGMSSSSTQGNVARPKSAKKLRDEPDHLLVLVHGIFASPNDWIYVEAELKKRLG 150
           +  L+ Q MS+  TQGN A P+     + EPDHLLVLVHGI ASP+DW Y EAELKKRLG
Sbjct: 63  HKSLRAQAMST--TQGNAASPRGFMHGKHEPDHLLVLVHGILASPSDWTYAEAELKKRLG 120

Query: 149 SNFLIYASSSNTYTKTFGGIDGAGRRLADEV 57
            NFLIYASSSNTYTKTFGGIDGAG+RLADEV
Sbjct: 121 RNFLIYASSSNTYTKTFGGIDGAGKRLADEV 151


>ref|XP_002522574.1| catalytic, putative [Ricinus communis] gi|223538265|gb|EEF39874.1|
           catalytic, putative [Ricinus communis]
          Length = 459

 Score =  131 bits (329), Expect = 8e-29
 Identities = 65/100 (65%), Positives = 79/100 (79%)
 Frame = -3

Query: 356 FSGLTSFYKNTDLKIQGMSSSSTQGNVARPKSAKKLRDEPDHLLVLVHGIFASPNDWIYV 177
           FSG+ S +++ D + Q M+++  +GN A  K      +EPDHLLVLVHGI ASP+DWIYV
Sbjct: 57  FSGVNSNWRHQDFRAQAMNTA-IRGNFASSKGVVNGNNEPDHLLVLVHGILASPSDWIYV 115

Query: 176 EAELKKRLGSNFLIYASSSNTYTKTFGGIDGAGRRLADEV 57
           EAELKKRLG NFLIYAS+ NTYTKTF GIDGAG+RLA+EV
Sbjct: 116 EAELKKRLGRNFLIYASACNTYTKTFSGIDGAGKRLAEEV 155


>ref|XP_002317425.1| predicted protein [Populus trichocarpa] gi|222860490|gb|EEE98037.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  128 bits (322), Expect = 5e-28
 Identities = 72/143 (50%), Positives = 94/143 (65%), Gaps = 2/143 (1%)
 Frame = -3

Query: 479 RYNNTPNFKLRNGNGXXXXXXXXXXXSTIDFRPASLFNFFNFS--GLTSFYKNTDLKIQG 306
           R++N  ++ +RNG             S+     +S  + FNFS  G+ + +K   +K Q 
Sbjct: 22  RFSNNCHYSVRNGG----VAVGVGSSSSASSPSSSAHHGFNFSSSGVNNNWKPQGIKSQA 77

Query: 305 MSSSSTQGNVARPKSAKKLRDEPDHLLVLVHGIFASPNDWIYVEAELKKRLGSNFLIYAS 126
            ++++T+G  +    A   + EPDHLLVLVHGI ASP+DW YVEAELK+RLG NFLIYAS
Sbjct: 78  -TNTATKGRFSSSSGAMNGKSEPDHLLVLVHGILASPSDWTYVEAELKRRLGKNFLIYAS 136

Query: 125 SSNTYTKTFGGIDGAGRRLADEV 57
           S NTYTKTF GIDGAG+RLADEV
Sbjct: 137 SCNTYTKTFSGIDGAGKRLADEV 159


>ref|XP_003524964.1| PREDICTED: uncharacterized protein LOC100790076 [Glycine max]
          Length = 443

 Score =  124 bits (312), Expect = 8e-27
 Identities = 73/146 (50%), Positives = 85/146 (58%)
 Frame = -3

Query: 494 PLIQARYNNTPNFKLRNGNGXXXXXXXXXXXSTIDFRPASLFNFFNFSGLTSFYKNTDLK 315
           P I AR   +P    RN  G           S       S F F   SG  S  ++  L+
Sbjct: 5   PFIHARCAYSPRISNRNSKGASQQPHLASSSSP------STFTFSISSGTNSGQRHQGLR 58

Query: 314 IQGMSSSSTQGNVARPKSAKKLRDEPDHLLVLVHGIFASPNDWIYVEAELKKRLGSNFLI 135
            Q MSS +   ++A   S   L+++PDHLLVLVHGI  S  DW Y EAELK+RLG NFLI
Sbjct: 59  AQAMSSVTLGNSIA---SIGNLKNDPDHLLVLVHGILGSTGDWTYAEAELKRRLGKNFLI 115

Query: 134 YASSSNTYTKTFGGIDGAGRRLADEV 57
           Y SSSNTYTKTF GIDGAG+RLADEV
Sbjct: 116 YVSSSNTYTKTFSGIDGAGKRLADEV 141


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