BLASTX nr result

ID: Coptis23_contig00031696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031696
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_358629.1| hypothetical protein PhapfoPp083 [Phalaenopsis ...   133   3e-29
sp|Q67IP2.1|RR7_BUTUM RecName: Full=30S ribosomal protein S7, ch...   131   1e-28
ref|YP_004769673.1| ribosomal protein S7 (chloroplast) [Spirodel...   131   1e-28
gb|AEX01324.1| ribosomal protein S7 [Pleea tenuifolia]                131   1e-28
gb|AEX01291.1| ribosomal protein S7 [Ruppia maritima]                 131   1e-28

>ref|YP_358629.1| hypothetical protein PhapfoPp083 [Phalaenopsis aphrodite subsp.
           formosana] gi|58802846|gb|AAW82566.1| hypothetical
           protein [Phalaenopsis aphrodite subsp. formosana]
          Length = 79

 Score =  133 bits (334), Expect = 3e-29
 Identities = 66/76 (86%), Positives = 67/76 (88%)
 Frame = +2

Query: 218 LCFIFRLFRERYRSFPILSFSIDSFPIEMYGSMDLCVYIDPVHGLTKMCKSSICLCHFMS 397
           L F F LFRER RS PILSF IDSFPIEMYGSMDLCVYIDPVHGLTKM KSSICLCH MS
Sbjct: 4   LSFPFCLFRERSRSIPILSFPIDSFPIEMYGSMDLCVYIDPVHGLTKMRKSSICLCHSMS 63

Query: 398 LFLFAYGIATPFGSIH 445
           LFLFAYGIAT FGSI+
Sbjct: 64  LFLFAYGIATAFGSIY 79


>sp|Q67IP2.1|RR7_BUTUM RecName: Full=30S ribosomal protein S7, chloroplastic
           gi|37721171|gb|AAN31961.1| ribosomal protein S7 [Butomus
           umbellatus] gi|340807229|gb|AEK71815.1| ribosomal
           protein S7 [Aristolochia littoralis]
           gi|365823497|gb|AEX01284.1| ribosomal protein S7
           [Posidonia australis] gi|365823500|gb|AEX01286.1|
           ribosomal protein S7 [Amphibolis griffithii]
           gi|365823511|gb|AEX01294.1| ribosomal protein S7
           [Maundia triglochinoides] gi|365823515|gb|AEX01297.1|
           ribosomal protein S7 [Triglochin maritima]
           gi|365823519|gb|AEX01300.1| ribosomal protein S7
           [Aponogeton distachyus] gi|365823527|gb|AEX01306.1|
           ribosomal protein S7 [Orontium aquaticum]
           gi|372480930|gb|AEX94144.1| ribosomal protein S7
           (chloroplast) [Gilliesia graminea]
          Length = 155

 Score =  131 bits (329), Expect = 1e-28
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = -2

Query: 550 EIGSTQGKSLAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHKMAEANR 371
           EIGSTQGK+LAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHKMAEANR
Sbjct: 90  EIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHKMAEANR 149

Query: 370 AFAHFR 353
           AFAHFR
Sbjct: 150 AFAHFR 155


>ref|YP_004769673.1| ribosomal protein S7 (chloroplast) [Spirodela polyrhiza]
           gi|342316179|ref|YP_004769688.1| ribosomal protein S7
           (chloroplast) [Spirodela polyrhiza]
           gi|377819424|ref|YP_005097919.1| ribosomal protein S7
           (chloroplast) [Colocasia esculenta]
           gi|377819439|ref|YP_005097934.1| ribosomal protein S7
           (chloroplast) [Colocasia esculenta]
           gi|68052959|sp|Q6KGV8.1|RR7_SPAWA RecName: Full=30S
           ribosomal protein S7, chloroplastic
           gi|33338930|gb|AAQ14236.1| ribosomal protein S7
           [Spathiphyllum wallisii] gi|340536685|gb|AEK48452.1|
           ribosomal protein S7 (chloroplast) [Colocasia esculenta]
           gi|340536700|gb|AEK48467.1| ribosomal protein S7
           (chloroplast) [Colocasia esculenta]
           gi|340536772|gb|AEK48538.1| ribosomal protein S7
           (chloroplast) [Colocasia esculenta]
           gi|340536787|gb|AEK48553.1| ribosomal protein S7
           (chloroplast) [Colocasia esculenta]
           gi|340807190|gb|AEK71781.1| ribosomal protein S7
           [Spathiphyllum sp. M. J. Moore 338]
           gi|341834114|gb|AEK94385.1| ribosomal protein S7
           [Spirodela polyrhiza] gi|341834129|gb|AEK94400.1|
           ribosomal protein S7 [Spirodela polyrhiza]
           gi|365823535|gb|AEX01312.1| ribosomal protein S7 [Arum
           italicum]
          Length = 155

 Score =  131 bits (329), Expect = 1e-28
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = -2

Query: 550 EIGSTQGKSLAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHKMAEANR 371
           EIGSTQGK+LAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHKMAEANR
Sbjct: 90  EIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHKMAEANR 149

Query: 370 AFAHFR 353
           AFAHFR
Sbjct: 150 AFAHFR 155


>gb|AEX01324.1| ribosomal protein S7 [Pleea tenuifolia]
          Length = 155

 Score =  131 bits (329), Expect = 1e-28
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = -2

Query: 550 EIGSTQGKSLAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHKMAEANR 371
           EIGSTQGK+LAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHKMAEANR
Sbjct: 90  EIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHKMAEANR 149

Query: 370 AFAHFR 353
           AFAHFR
Sbjct: 150 AFAHFR 155


>gb|AEX01291.1| ribosomal protein S7 [Ruppia maritima]
          Length = 155

 Score =  131 bits (329), Expect = 1e-28
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = -2

Query: 550 EIGSTQGKSLAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHKMAEANR 371
           EIGSTQGK+LAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHKMAEANR
Sbjct: 90  EIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHKMAEANR 149

Query: 370 AFAHFR 353
           AFAHFR
Sbjct: 150 AFAHFR 155


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