BLASTX nr result

ID: Coptis23_contig00031695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031695
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21786.3| unnamed protein product [Vitis vinifera]              363   1e-98
ref|XP_002269074.1| PREDICTED: GTP-dependent nucleic acid-bindin...   363   1e-98
ref|XP_002299001.1| predicted protein [Populus trichocarpa] gi|2...   357   9e-97
ref|XP_002513417.1| GTP-binding protein, putative [Ricinus commu...   355   4e-96
ref|XP_004144639.1| PREDICTED: GTP-dependent nucleic acid-bindin...   348   7e-94

>emb|CBI21786.3| unnamed protein product [Vitis vinifera]
          Length = 370

 Score =  363 bits (933), Expect = 1e-98
 Identities = 188/229 (82%), Positives = 202/229 (88%)
 Frame = -1

Query: 687 QAANFPFCTIEPNVGIVAVPDPRLQVLSDLCKSQRSVPASIEFVDIAGLVKGASQGEGLG 508
           QAANFPFCTIEPNVGIVAVPDPRL VLSD+ KSQR VPASIEFVDIAGLVKGASQGEGLG
Sbjct: 29  QAANFPFCTIEPNVGIVAVPDPRLHVLSDISKSQRVVPASIEFVDIAGLVKGASQGEGLG 88

Query: 507 NKFLSHIRQVDSILQVVRCFEDRDIVHVTGKVDPKSDIEVINLELVFCDLDQIEXXXXXX 328
           NKFLSHIR+VDSILQVVRCFED DIVHV GKVDPKSDI+VINLELVF DLDQIE      
Sbjct: 89  NKFLSHIREVDSILQVVRCFEDNDIVHVNGKVDPKSDIDVINLELVFSDLDQIEKRMEKL 148

Query: 327 XXXXXXXXXXXXKEEAEKSALERIRNALMDGKPARSVALTEFEKESVEHLCLLTMKPVIY 148
                       KEEAEKSALERIR ALMDGKPARSV LT+FEK++++HLCLLTMKP+IY
Sbjct: 149 KKGKAKDSQSKLKEEAEKSALERIREALMDGKPARSVTLTDFEKDAIKHLCLLTMKPIIY 208

Query: 147 VANVAESELAEPSNNPHVKEVMNLATELQSGLVTISAQVESELTELPSE 1
           VANVAES+LAEP +NP+VKEVMNLA+ELQSG+VTISAQVESELTELPSE
Sbjct: 209 VANVAESDLAEPGSNPYVKEVMNLASELQSGIVTISAQVESELTELPSE 257


>ref|XP_002269074.1| PREDICTED: GTP-dependent nucleic acid-binding protein engD-like
           [Vitis vinifera]
          Length = 422

 Score =  363 bits (933), Expect = 1e-98
 Identities = 188/229 (82%), Positives = 202/229 (88%)
 Frame = -1

Query: 687 QAANFPFCTIEPNVGIVAVPDPRLQVLSDLCKSQRSVPASIEFVDIAGLVKGASQGEGLG 508
           QAANFPFCTIEPNVGIVAVPDPRL VLSD+ KSQR VPASIEFVDIAGLVKGASQGEGLG
Sbjct: 81  QAANFPFCTIEPNVGIVAVPDPRLHVLSDISKSQRVVPASIEFVDIAGLVKGASQGEGLG 140

Query: 507 NKFLSHIRQVDSILQVVRCFEDRDIVHVTGKVDPKSDIEVINLELVFCDLDQIEXXXXXX 328
           NKFLSHIR+VDSILQVVRCFED DIVHV GKVDPKSDI+VINLELVF DLDQIE      
Sbjct: 141 NKFLSHIREVDSILQVVRCFEDNDIVHVNGKVDPKSDIDVINLELVFSDLDQIEKRMEKL 200

Query: 327 XXXXXXXXXXXXKEEAEKSALERIRNALMDGKPARSVALTEFEKESVEHLCLLTMKPVIY 148
                       KEEAEKSALERIR ALMDGKPARSV LT+FEK++++HLCLLTMKP+IY
Sbjct: 201 KKGKAKDSQSKLKEEAEKSALERIREALMDGKPARSVTLTDFEKDAIKHLCLLTMKPIIY 260

Query: 147 VANVAESELAEPSNNPHVKEVMNLATELQSGLVTISAQVESELTELPSE 1
           VANVAES+LAEP +NP+VKEVMNLA+ELQSG+VTISAQVESELTELPSE
Sbjct: 261 VANVAESDLAEPGSNPYVKEVMNLASELQSGIVTISAQVESELTELPSE 309


>ref|XP_002299001.1| predicted protein [Populus trichocarpa] gi|222846259|gb|EEE83806.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score =  357 bits (917), Expect = 9e-97
 Identities = 188/229 (82%), Positives = 200/229 (87%)
 Frame = -1

Query: 687 QAANFPFCTIEPNVGIVAVPDPRLQVLSDLCKSQRSVPASIEFVDIAGLVKGASQGEGLG 508
           QAANFPFCTIEPNVGIVAVPD RL VLS+L KSQR+VPASIEFVDIAGLVKGASQGEGLG
Sbjct: 29  QAANFPFCTIEPNVGIVAVPDSRLNVLSELSKSQRAVPASIEFVDIAGLVKGASQGEGLG 88

Query: 507 NKFLSHIRQVDSILQVVRCFEDRDIVHVTGKVDPKSDIEVINLELVFCDLDQIEXXXXXX 328
           NKFLSHIR+VDSILQVVRCF+D DIVHV G VDPKSDI+VINLELVF DLDQIE      
Sbjct: 89  NKFLSHIREVDSILQVVRCFDDNDIVHVNGNVDPKSDIDVINLELVFSDLDQIEKRLEKL 148

Query: 327 XXXXXXXXXXXXKEEAEKSALERIRNALMDGKPARSVALTEFEKESVEHLCLLTMKPVIY 148
                       KEEAEKSALERIR ALMDGKPARSVALT+FEK++V+HLCLLTMKPVIY
Sbjct: 149 KKGKARDSQSKLKEEAEKSALERIREALMDGKPARSVALTDFEKDAVKHLCLLTMKPVIY 208

Query: 147 VANVAESELAEPSNNPHVKEVMNLATELQSGLVTISAQVESELTELPSE 1
           VANVAESELA+  NNP+VKEVMNLA+ELQSGLVTISAQVESELTELP E
Sbjct: 209 VANVAESELADAGNNPYVKEVMNLASELQSGLVTISAQVESELTELPFE 257


>ref|XP_002513417.1| GTP-binding protein, putative [Ricinus communis]
           gi|223547325|gb|EEF48820.1| GTP-binding protein,
           putative [Ricinus communis]
          Length = 417

 Score =  355 bits (912), Expect = 4e-96
 Identities = 184/227 (81%), Positives = 199/227 (87%)
 Frame = -1

Query: 687 QAANFPFCTIEPNVGIVAVPDPRLQVLSDLCKSQRSVPASIEFVDIAGLVKGASQGEGLG 508
           QAANFPFCTIEPNVG VAVPDPRL VLS L KSQR+VPASIEFVDIAGLVKGASQGEGLG
Sbjct: 76  QAANFPFCTIEPNVGTVAVPDPRLHVLSGLSKSQRAVPASIEFVDIAGLVKGASQGEGLG 135

Query: 507 NKFLSHIRQVDSILQVVRCFEDRDIVHVTGKVDPKSDIEVINLELVFCDLDQIEXXXXXX 328
           NKFLSHIR+VDSILQVVRCFED DIVHV+GKVDPKSDI+VINLELVF DLDQIE      
Sbjct: 136 NKFLSHIREVDSILQVVRCFEDNDIVHVSGKVDPKSDIDVINLELVFSDLDQIEKRLEKL 195

Query: 327 XXXXXXXXXXXXKEEAEKSALERIRNALMDGKPARSVALTEFEKESVEHLCLLTMKPVIY 148
                       KEEAEKSALERI+ ALMDGKPARSVAL++FEK++++HLCLLTMKPVIY
Sbjct: 196 KKGKAKDSQSKLKEEAEKSALERIQGALMDGKPARSVALSDFEKDAIKHLCLLTMKPVIY 255

Query: 147 VANVAESELAEPSNNPHVKEVMNLATELQSGLVTISAQVESELTELP 7
           VANVAES+LA P NNPHVKEVMNLA++LQSGLV +SAQVESELTELP
Sbjct: 256 VANVAESDLAVPDNNPHVKEVMNLASDLQSGLVAVSAQVESELTELP 302


>ref|XP_004144639.1| PREDICTED: GTP-dependent nucleic acid-binding protein EngD-like
           [Cucumis sativus] gi|449523505|ref|XP_004168764.1|
           PREDICTED: GTP-dependent nucleic acid-binding protein
           EngD-like [Cucumis sativus]
          Length = 421

 Score =  348 bits (892), Expect = 7e-94
 Identities = 178/229 (77%), Positives = 199/229 (86%)
 Frame = -1

Query: 687 QAANFPFCTIEPNVGIVAVPDPRLQVLSDLCKSQRSVPASIEFVDIAGLVKGASQGEGLG 508
           QAANFPFCTIEPNVG+VAVPDPRL  LSDL KSQR+V ASIEFVDIAGLVKGASQGEGLG
Sbjct: 80  QAANFPFCTIEPNVGVVAVPDPRLHKLSDLSKSQRAVAASIEFVDIAGLVKGASQGEGLG 139

Query: 507 NKFLSHIRQVDSILQVVRCFEDRDIVHVTGKVDPKSDIEVINLELVFCDLDQIEXXXXXX 328
           NKFLSHIR+VDSILQVVRCFED DIVHV GK+DPK+DI+VINLELVF DLDQIE      
Sbjct: 140 NKFLSHIREVDSILQVVRCFEDNDIVHVNGKIDPKTDIDVINLELVFSDLDQIEKRLEKL 199

Query: 327 XXXXXXXXXXXXKEEAEKSALERIRNALMDGKPARSVALTEFEKESVEHLCLLTMKPVIY 148
                       KEEAEKSALE+I+  L+DGKPARSV LT+FEK++++HLCLLTMKPVIY
Sbjct: 200 KKGKAKDSQSKVKEEAEKSALEKIQKVLLDGKPARSVTLTDFEKDAIKHLCLLTMKPVIY 259

Query: 147 VANVAESELAEPSNNPHVKEVMNLATELQSGLVTISAQVESELTELPSE 1
           VANVAES+LAEP++N HVKEVM LA+ELQSG+VT+SAQVESEL+ELPSE
Sbjct: 260 VANVAESDLAEPASNLHVKEVMGLASELQSGIVTVSAQVESELSELPSE 308


Top