BLASTX nr result

ID: Coptis23_contig00031645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031645
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284938.1| PREDICTED: protein SSH4-like [Vitis vinifera]     178   4e-43
ref|XP_002510180.1| conserved hypothetical protein [Ricinus comm...   163   1e-38
ref|XP_003589150.1| Protein ssh4 [Medicago truncatula] gi|355478...   151   6e-35
ref|XP_003603080.1| Protein ssh4 [Medicago truncatula] gi|355492...   148   4e-34
ref|XP_003545323.1| PREDICTED: uncharacterized protein LOC100788...   145   3e-33

>ref|XP_002284938.1| PREDICTED: protein SSH4-like [Vitis vinifera]
          Length = 305

 Score =  178 bits (452), Expect = 4e-43
 Identities = 91/141 (64%), Positives = 109/141 (77%), Gaps = 7/141 (4%)
 Frame = +2

Query: 2   QTALPLPGPFLGNSSFPQEAFFEITTLSSREDGVRNVSK-GEGEKTKLIQEVANANAQSD 178
           +TALPLPGP LGNSSFPQEA+FEIT L S E    +V +  EGE+TKLI E +NA A S+
Sbjct: 27  RTALPLPGPPLGNSSFPQEAYFEITILFSGEGDPESVGRVKEGERTKLIHENSNAKANSE 86

Query: 179 ------ELKIAIKDEGRSEAVSMCLGLTVGGSLPKKLPGTYPGSIGFNANGSVYLDGIKL 340
                 E+K+  KD+G+ E V + +GLT GGSLP KLPG+YPGSIGFN+NGSVYLDGIKL
Sbjct: 87  SIIHLEEMKLGSKDDGKGEVVMLSVGLTAGGSLPLKLPGSYPGSIGFNSNGSVYLDGIKL 146

Query: 341 VFENEKAEWESTDRVIGCGFN 403
           VFE+EK EWE  D+VIGCGF+
Sbjct: 147 VFESEKEEWERADKVIGCGFD 167


>ref|XP_002510180.1| conserved hypothetical protein [Ricinus communis]
           gi|223550881|gb|EEF52367.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 480

 Score =  163 bits (413), Expect = 1e-38
 Identities = 90/153 (58%), Positives = 106/153 (69%), Gaps = 19/153 (12%)
 Frame = +2

Query: 2   QTALPLPGPFLGNSSFPQEAFFEITTLSSR---EDGVRNVSKGEGEKTKLIQEVANANAQ 172
           +T LPLPGP LGNS+FPQEA+FEIT L  +    D        EGEKTKLIQE +N    
Sbjct: 182 RTGLPLPGPPLGNSAFPQEAYFEITVLYCQGHYHDHSVVAKIREGEKTKLIQENSNHRMN 241

Query: 173 SD---------------ELKIAI-KDEGRSEAVSMCLGLTVGGSLPKKLPGTYPGSIGFN 304
           S+               ELK+A  KDEG+ EAV + LGLT GGSLP +LPG+YPGSIGFN
Sbjct: 242 SESLAHVTSSHRFNKFEELKLATGKDEGKDEAVMLSLGLTTGGSLPLRLPGSYPGSIGFN 301

Query: 305 ANGSVYLDGIKLVFENEKAEWESTDRVIGCGFN 403
           +NGSVYLDGIKLVFE+EK +W S D+VIGCGF+
Sbjct: 302 SNGSVYLDGIKLVFESEKGDWASKDKVIGCGFD 334


>ref|XP_003589150.1| Protein ssh4 [Medicago truncatula] gi|355478198|gb|AES59401.1|
           Protein ssh4 [Medicago truncatula]
          Length = 446

 Score =  151 bits (381), Expect = 6e-35
 Identities = 82/140 (58%), Positives = 104/140 (74%), Gaps = 6/140 (4%)
 Frame = +2

Query: 2   QTALPLPGPFLGNSSFPQEAFFEITTLSSREDG-VRNVSKGEGEKTKLIQEVANANAQSD 178
           +T+LPLPGPFLGN +FPQEA+FEIT L S  +G    V + EGEKTKL+ E  ++N + D
Sbjct: 166 RTSLPLPGPFLGNHAFPQEAYFEITILYSSWNGDYELVGRREGEKTKLLIE-DSSNDEGD 224

Query: 179 -----ELKIAIKDEGRSEAVSMCLGLTVGGSLPKKLPGTYPGSIGFNANGSVYLDGIKLV 343
                E+K+  K  G SE+V   LGLT GG +P ++PGTYP SIGFN+NGSV+LDG+KLV
Sbjct: 225 LKSVEEMKVEGKS-GISESVMFSLGLTGGGGVPLRVPGTYPRSIGFNSNGSVFLDGMKLV 283

Query: 344 FENEKAEWESTDRVIGCGFN 403
           FE+EKA+W  TD VIGCGF+
Sbjct: 284 FESEKAQWVGTDTVIGCGFD 303


>ref|XP_003603080.1| Protein ssh4 [Medicago truncatula] gi|355492128|gb|AES73331.1|
           Protein ssh4 [Medicago truncatula]
          Length = 469

 Score =  148 bits (374), Expect = 4e-34
 Identities = 83/150 (55%), Positives = 107/150 (71%), Gaps = 16/150 (10%)
 Frame = +2

Query: 2   QTALPLPGPFLGNSSFPQEAFFEITTLSS-REDGVRNVSKG-EGEKTKLIQE-------- 151
           +TALPLPGP LGN  FPQEA+FEIT LSS R D   +V K  EG+K KLI +        
Sbjct: 180 RTALPLPGPVLGNYVFPQEAYFEITMLSSSRGDEFESVRKSVEGDKMKLIVKGNSEALVH 239

Query: 152 VANANAQS----DELKIAIKDEG--RSEAVSMCLGLTVGGSLPKKLPGTYPGSIGFNANG 313
           V + N+      +E+K+  ++ G  ++++V   LGLTVGG +  K+PG+YPGSIGFN+NG
Sbjct: 240 VTSGNSHKSNSVEEMKVDGRENGGKKTDSVMFSLGLTVGGPVVLKVPGSYPGSIGFNSNG 299

Query: 314 SVYLDGIKLVFENEKAEWESTDRVIGCGFN 403
           SVYLDG+KLVFE+EKAEW  TD+VIGCGF+
Sbjct: 300 SVYLDGMKLVFESEKAEWIGTDKVIGCGFD 329


>ref|XP_003545323.1| PREDICTED: uncharacterized protein LOC100788520 [Glycine max]
          Length = 465

 Score =  145 bits (366), Expect = 3e-33
 Identities = 78/140 (55%), Positives = 101/140 (72%), Gaps = 6/140 (4%)
 Frame = +2

Query: 2   QTALPLPGPFLGNSSFPQEAFFEITTLSSR-EDGVRNVSKGEGEKTKLIQEVANANAQS- 175
           +T LPLPGP LGN +FPQEA+FEIT L S  +D    V+K EGEKTKL+ E  +  A   
Sbjct: 186 RTVLPLPGPPLGNYAFPQEAYFEITILFSHIDDHELVVAKREGEKTKLLIEDGSNGASEL 245

Query: 176 ---DELKIAIKDEG-RSEAVSMCLGLTVGGSLPKKLPGTYPGSIGFNANGSVYLDGIKLV 343
              +E+K+  K+ G +S +V   LGLT GG +P  +PG+YP SIGFN+NGSV+L+G+KLV
Sbjct: 246 DTVEEMKLGQKEGGEKSGSVMFSLGLTAGGGVPLTVPGSYPRSIGFNSNGSVFLEGMKLV 305

Query: 344 FENEKAEWESTDRVIGCGFN 403
            E+EKA+W  TDRVIGCGF+
Sbjct: 306 MESEKAQWIGTDRVIGCGFD 325


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