BLASTX nr result

ID: Coptis23_contig00031628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031628
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    42   2e-06

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 42.0 bits (97), Expect(2) = 2e-06
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = -3

Query: 248 VLEEGQIFIAGRIFAVRPWSVEAEVMRSKTATVPIWIKMSNVPKELWTL 102
           VLE     +A R   ++ W    + ++   A VP+W+++ NVP E WT+
Sbjct: 208 VLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTI 256



 Score = 34.7 bits (78), Expect(2) = 2e-06
 Identities = 18/35 (51%), Positives = 24/35 (68%)
 Frame = -2

Query: 105 IE*LSYLASLVGDPKCMDEATTNKKRLNFAKVCVE 1
           I+ LS +AS VG P   D  T  +KRL++A+VCVE
Sbjct: 256 IKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVE 290


Top