BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031619
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544381.1| PREDICTED: putative tRNA pseudouridine synth...   306   1e-81
emb|CBI18893.3| unnamed protein product [Vitis vinifera]              303   9e-81
ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synth...   303   9e-81
ref|XP_002510624.1| conserved hypothetical protein [Ricinus comm...   297   9e-79
ref|XP_004145592.1| PREDICTED: putative tRNA pseudouridine synth...   295   3e-78

>ref|XP_003544381.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Glycine
           max]
          Length = 484

 Score =  306 bits (784), Expect = 1e-81
 Identities = 148/185 (80%), Positives = 165/185 (89%)
 Frame = +3

Query: 3   GREDIDVRMLGSGRPFLVEVQNARHDPSKVEMTDIEEKINNSEIKLVRVKNLKVVGNQGW 182
           GREDIDVRMLG GRPFLVEVQN RH PS++ + DIE+ IN  E KLVRVKNLK+VG+ GW
Sbjct: 297 GREDIDVRMLGPGRPFLVEVQNGRHIPSELFVKDIEKTINKMENKLVRVKNLKLVGSDGW 356

Query: 183 TLMREGEAEKQKQYAALVWISRSLGDEDLNTLSSLKDMQIVQRTPVRVLHRRSPLDREKI 362
            LMREGEAEKQKQYAALVWISR L DED+  +SSLKD++++QRTP+RVLHRRSPL+REKI
Sbjct: 357 NLMREGEAEKQKQYAALVWISRPLKDEDIQCVSSLKDLKVLQRTPIRVLHRRSPLEREKI 416

Query: 363 IHWMKVEKIVGSTQYFLLHLCTQAGTYIKEFVHGDLGRTQPSIGSILGCRAEILLLDVTD 542
           IHWMK E I GS+QYFLLHLCTQAGTYIKEFVHGDLGRT PSIGSILGCRAEIL LDVTD
Sbjct: 417 IHWMKTETIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTD 476

Query: 543 VKMDC 557
           +KM+C
Sbjct: 477 IKMEC 481


>emb|CBI18893.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  303 bits (777), Expect = 9e-81
 Identities = 146/185 (78%), Positives = 166/185 (89%)
 Frame = +3

Query: 3   GREDIDVRMLGSGRPFLVEVQNARHDPSKVEMTDIEEKINNSEIKLVRVKNLKVVGNQGW 182
           GREDI+VRMLGSGRPFLVE+QN+RH PS+  + +IE KINN E KLVRVKNLK+V + GW
Sbjct: 403 GREDINVRMLGSGRPFLVEIQNSRHVPSEALIKEIEVKINNLENKLVRVKNLKLVDSHGW 462

Query: 183 TLMREGEAEKQKQYAALVWISRSLGDEDLNTLSSLKDMQIVQRTPVRVLHRRSPLDREKI 362
           +LM+EGE EKQKQYAALVWI R L DED+  +SSLKD +I+QRTP+RVLHRRSPL+REKI
Sbjct: 463 SLMQEGEEEKQKQYAALVWIDRPLKDEDMQAISSLKDKKILQRTPIRVLHRRSPLEREKI 522

Query: 363 IHWMKVEKIVGSTQYFLLHLCTQAGTYIKEFVHGDLGRTQPSIGSILGCRAEILLLDVTD 542
           IHWMK+EKI GS+QYFLLHLCTQAGTYIKEFVHGDLGRT PS+GSILGCRAEIL LDVT+
Sbjct: 523 IHWMKIEKIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSVGSILGCRAEILQLDVTE 582

Query: 543 VKMDC 557
           VKMDC
Sbjct: 583 VKMDC 587


>ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Vitis
           vinifera]
          Length = 578

 Score =  303 bits (777), Expect = 9e-81
 Identities = 146/185 (78%), Positives = 166/185 (89%)
 Frame = +3

Query: 3   GREDIDVRMLGSGRPFLVEVQNARHDPSKVEMTDIEEKINNSEIKLVRVKNLKVVGNQGW 182
           GREDI+VRMLGSGRPFLVE+QN+RH PS+  + +IE KINN E KLVRVKNLK+V + GW
Sbjct: 390 GREDINVRMLGSGRPFLVEIQNSRHVPSEALIKEIEVKINNLENKLVRVKNLKLVDSHGW 449

Query: 183 TLMREGEAEKQKQYAALVWISRSLGDEDLNTLSSLKDMQIVQRTPVRVLHRRSPLDREKI 362
           +LM+EGE EKQKQYAALVWI R L DED+  +SSLKD +I+QRTP+RVLHRRSPL+REKI
Sbjct: 450 SLMQEGEEEKQKQYAALVWIDRPLKDEDMQAISSLKDKKILQRTPIRVLHRRSPLEREKI 509

Query: 363 IHWMKVEKIVGSTQYFLLHLCTQAGTYIKEFVHGDLGRTQPSIGSILGCRAEILLLDVTD 542
           IHWMK+EKI GS+QYFLLHLCTQAGTYIKEFVHGDLGRT PS+GSILGCRAEIL LDVT+
Sbjct: 510 IHWMKIEKIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSVGSILGCRAEILQLDVTE 569

Query: 543 VKMDC 557
           VKMDC
Sbjct: 570 VKMDC 574


>ref|XP_002510624.1| conserved hypothetical protein [Ricinus communis]
           gi|223551325|gb|EEF52811.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 565

 Score =  297 bits (760), Expect = 9e-79
 Identities = 144/185 (77%), Positives = 162/185 (87%)
 Frame = +3

Query: 3   GREDIDVRMLGSGRPFLVEVQNARHDPSKVEMTDIEEKINNSEIKLVRVKNLKVVGNQGW 182
           GREDIDVRMLGSGRPFLVE+QN R  PS+  + +IE KINN   KLV V++LK+V N  W
Sbjct: 377 GREDIDVRMLGSGRPFLVEIQNPRQLPSETLVEEIETKINNMHDKLVGVRHLKMVSNHSW 436

Query: 183 TLMREGEAEKQKQYAALVWISRSLGDEDLNTLSSLKDMQIVQRTPVRVLHRRSPLDREKI 362
           TLM EGEAEKQKQY ALVWISR L D+DL +++SLKDMQI+QRTPVRVLHRRSPL+R+KI
Sbjct: 437 TLMHEGEAEKQKQYCALVWISRPLEDQDLQSIASLKDMQILQRTPVRVLHRRSPLERQKI 496

Query: 363 IHWMKVEKIVGSTQYFLLHLCTQAGTYIKEFVHGDLGRTQPSIGSILGCRAEILLLDVTD 542
           IHWMK+E++ GS QYFLLHLCTQAGTYIKEFVHGDLGRT PSIGSILGCRAEIL LDVT+
Sbjct: 497 IHWMKIERLTGSCQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVTE 556

Query: 543 VKMDC 557
           VKMDC
Sbjct: 557 VKMDC 561


>ref|XP_004145592.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Cucumis
           sativus]
          Length = 497

 Score =  295 bits (756), Expect = 3e-78
 Identities = 141/185 (76%), Positives = 167/185 (90%)
 Frame = +3

Query: 3   GREDIDVRMLGSGRPFLVEVQNARHDPSKVEMTDIEEKINNSEIKLVRVKNLKVVGNQGW 182
           GRED+DVRMLGSGRPFLVE+QNAR  PS++ + +I+ KIN+SE KL+ V+NLKVVG++GW
Sbjct: 309 GREDLDVRMLGSGRPFLVEIQNARLLPSEMIINEIQSKINSSENKLIGVRNLKVVGSEGW 368

Query: 183 TLMREGEAEKQKQYAALVWISRSLGDEDLNTLSSLKDMQIVQRTPVRVLHRRSPLDREKI 362
            L++EGEAEKQKQYAALVW SR L D DL ++SSLKD++I+QRTP+RVLHRRSPL+REKI
Sbjct: 369 ALVQEGEAEKQKQYAALVWTSRPLEDADLLSISSLKDLKILQRTPIRVLHRRSPLEREKI 428

Query: 363 IHWMKVEKIVGSTQYFLLHLCTQAGTYIKEFVHGDLGRTQPSIGSILGCRAEILLLDVTD 542
           IHWMK+EK+  S+QY+LLHLCTQAGTYIKEFVHGDLGRT PSIGSIL CRAEIL LDVTD
Sbjct: 429 IHWMKIEKVAESSQYYLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILSCRAEILQLDVTD 488

Query: 543 VKMDC 557
           +KMDC
Sbjct: 489 IKMDC 493