BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031611
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...    82   3e-14
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcript...    80   2e-13

>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 34/85 (40%), Positives = 47/85 (55%)
 Frame = +1

Query: 16  FQLKETY*TMRRKIQNNDWYRTIWFRNNIPRHSFIGWMVMKGALKTLSKMYDWRVVQSKM 195
           F  KET+   R +   N+WY+ IWF +  P++SFI W+  K  L T  +M  W    +  
Sbjct: 257 FSTKETWADTREQKPRNEWYQGIWFSHATPKYSFITWLATKNRLSTGDRMMSWNAGVNLS 316

Query: 196 CVLCWREDETEKHLFFHCNYSKYIW 270
           CV C  + ET  HLFF C YS+ +W
Sbjct: 317 CVFCQEQTETRNHLFFTCRYSREVW 341


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 34/85 (40%), Positives = 52/85 (61%)
 Frame = +1

Query: 16   FQLKETY*TMRRKIQNNDWYRTIWFRNNIPRHSFIGWMVMKGALKTLSKMYDWRVVQSKM 195
            F +K  +  +RR  Q  +W+  +WF+N +PRHSF+ WMV++  L T  K++ + +     
Sbjct: 857  FSVKVAWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNR 916

Query: 196  CVLCWREDETEKHLFFHCNYSKYIW 270
            C LC R +E   HLFF C+Y+K IW
Sbjct: 917  CSLCLRNNEDHNHLFFECSYTKAIW 941


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 34/85 (40%), Positives = 51/85 (60%)
 Frame = +1

Query: 16   FQLKETY*TMRRKIQNNDWYRTIWFRNNIPRHSFIGWMVMKGALKTLSKMYDWRVVQSKM 195
            F +K  +  +RR  Q  +W+  +WF+N +PRHSF+ WM ++  L T  K+Y + +     
Sbjct: 1197 FLVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNR 1256

Query: 196  CVLCWREDETEKHLFFHCNYSKYIW 270
            C LC R +E   HLFF C+Y+K IW
Sbjct: 1257 CSLCLRNNEDHNHLFFECSYTKAIW 1281


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 33/85 (38%), Positives = 51/85 (60%)
 Frame = +1

Query: 16  FQLKETY*TMRRKIQNNDWYRTIWFRNNIPRHSFIGWMVMKGALKTLSKMYDWRVVQSKM 195
           F +K  +  +RR  Q  +W+  +WF+N +PRHSF+ WM ++  L T  K++ + +     
Sbjct: 324 FSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNR 383

Query: 196 CVLCWREDETEKHLFFHCNYSKYIW 270
           C LC R +E   HLFF C+Y+K IW
Sbjct: 384 CSLCLRNNEDHNHLFFECSYTKAIW 408


>ref|NP_178356.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana] gi|3184287|gb|AAC18934.1|
           putative non-LTR retroelement reverse transcriptase
           [Arabidopsis thaliana] gi|330250497|gb|AEC05591.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related family protein [Arabidopsis
           thaliana]
          Length = 211

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 28/69 (40%), Positives = 44/69 (63%)
 Frame = +1

Query: 67  DWYRTIWFRNNIPRHSFIGWMVMKGALKTLSKMYDWRVVQSKMCVLCWREDETEKHLFFH 246
           DW++ IWF+  IP+H+FI W+ M+  L T  +M  W  +   +C+ C   DET +HLFF 
Sbjct: 42  DWFKAIWFKGKIPKHAFIAWVNMRHRLHTKDRMISWGFIFPPLCLFCNTHDETRQHLFFD 101

Query: 247 CNYSKYIWI 273
           C +++ +WI
Sbjct: 102 CEFAREVWI 110