BLASTX nr result

ID: Coptis23_contig00031596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031596
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321181.1| histidine kinase cytokinin receptor [Populus...   117   1e-24
ref|XP_002269977.2| PREDICTED: histidine kinase 2-like [Vitis vi...   113   1e-23
emb|CBI28424.3| unnamed protein product [Vitis vinifera]              113   1e-23
emb|CAN76309.1| hypothetical protein VITISV_028333 [Vitis vinifera]   113   1e-23
ref|XP_002531702.1| histidine kinase 1, 2, 3 plant, putative [Ri...   110   1e-22

>ref|XP_002321181.1| histidine kinase cytokinin receptor [Populus trichocarpa]
            gi|222861954|gb|EEE99496.1| histidine kinase cytokinin
            receptor [Populus trichocarpa]
          Length = 1234

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/93 (60%), Positives = 68/93 (73%)
 Frame = -3

Query: 405  SMLVTCFQQVLGSGTRKQLNKVKPTVLERLLNGKQILXXXXXXXXXXVAEGALLKYGAKV 226
            S+L+ CFQ+  GSG + ++N+ KP  L+ LL GKQIL          VAEGAL K+GA V
Sbjct: 1063 SVLIACFQEAFGSGKKSEVNRKKPPALQNLLRGKQILVVDDNLVNRRVAEGALKKHGAIV 1122

Query: 225  TCVESGKASIEMLLPPHNFDACFMDLQMPEMDG 127
            TCVESGKA++E L PPH+FDACFMD QMPEMDG
Sbjct: 1123 TCVESGKAALEKLKPPHSFDACFMDFQMPEMDG 1155


>ref|XP_002269977.2| PREDICTED: histidine kinase 2-like [Vitis vinifera]
          Length = 1272

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/93 (62%), Positives = 67/93 (72%)
 Frame = -3

Query: 405  SMLVTCFQQVLGSGTRKQLNKVKPTVLERLLNGKQILXXXXXXXXXXVAEGALLKYGAKV 226
            S+L++CFQ+V G G RKQ N+ KP  L  LL  K+IL          VAE AL KYGA V
Sbjct: 1098 SVLISCFQEVFGIGKRKQANRGKPLTLGNLLREKRILVVDDNAVNRRVAEFALKKYGAIV 1157

Query: 225  TCVESGKASIEMLLPPHNFDACFMDLQMPEMDG 127
            TCV+SGKA++ ML PPHNFDACFMDLQMPEMDG
Sbjct: 1158 TCVDSGKAALLMLKPPHNFDACFMDLQMPEMDG 1190


>emb|CBI28424.3| unnamed protein product [Vitis vinifera]
          Length = 1203

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/93 (62%), Positives = 67/93 (72%)
 Frame = -3

Query: 405  SMLVTCFQQVLGSGTRKQLNKVKPTVLERLLNGKQILXXXXXXXXXXVAEGALLKYGAKV 226
            S+L++CFQ+V G G RKQ N+ KP  L  LL  K+IL          VAE AL KYGA V
Sbjct: 1029 SVLISCFQEVFGIGKRKQANRGKPLTLGNLLREKRILVVDDNAVNRRVAEFALKKYGAIV 1088

Query: 225  TCVESGKASIEMLLPPHNFDACFMDLQMPEMDG 127
            TCV+SGKA++ ML PPHNFDACFMDLQMPEMDG
Sbjct: 1089 TCVDSGKAALLMLKPPHNFDACFMDLQMPEMDG 1121


>emb|CAN76309.1| hypothetical protein VITISV_028333 [Vitis vinifera]
          Length = 1400

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/93 (62%), Positives = 67/93 (72%)
 Frame = -3

Query: 405  SMLVTCFQQVLGSGTRKQLNKVKPTVLERLLNGKQILXXXXXXXXXXVAEGALLKYGAKV 226
            S+L++CFQ+V G G RKQ N+ KP  L  LL  K+IL          VAE AL KYGA V
Sbjct: 1137 SVLISCFQEVFGIGKRKQANRGKPLTLGNLLREKRILVVDDNAVNRRVAEFALKKYGAIV 1196

Query: 225  TCVESGKASIEMLLPPHNFDACFMDLQMPEMDG 127
            TCV+SGKA++ ML PPHNFDACFMDLQMPEMDG
Sbjct: 1197 TCVDSGKAALLMLKPPHNFDACFMDLQMPEMDG 1229


>ref|XP_002531702.1| histidine kinase 1, 2, 3 plant, putative [Ricinus communis]
            gi|223528678|gb|EEF30693.1| histidine kinase 1, 2, 3
            plant, putative [Ricinus communis]
          Length = 922

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/93 (56%), Positives = 67/93 (72%)
 Frame = -3

Query: 405  SMLVTCFQQVLGSGTRKQLNKVKPTVLERLLNGKQILXXXXXXXXXXVAEGALLKYGAKV 226
            S+L +CFQ+ +GSG + Q+N+ KP+ L+ LL  K+IL          VAEGAL KYGA V
Sbjct: 748  SVLFSCFQEAIGSGKKSQVNRRKPSTLQNLLREKRILVVDDNKVNRRVAEGALKKYGAIV 807

Query: 225  TCVESGKASIEMLLPPHNFDACFMDLQMPEMDG 127
            TCVESGK ++E+L PPH FDACFMD  MPE+DG
Sbjct: 808  TCVESGKEALELLKPPHTFDACFMDRHMPELDG 840


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