BLASTX nr result

ID: Coptis23_contig00031586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031586
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28946.3| unnamed protein product [Vitis vinifera]              206   3e-51
emb|CAN66212.1| hypothetical protein VITISV_013736 [Vitis vinifera]   206   3e-51
ref|XP_002273837.2| PREDICTED: homeobox-leucine zipper protein H...   193   1e-47
ref|XP_002302880.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45
ref|XP_003543387.1| PREDICTED: homeobox-leucine zipper protein H...   181   5e-44

>emb|CBI28946.3| unnamed protein product [Vitis vinifera]
          Length = 757

 Score =  206 bits (523), Expect = 3e-51
 Identities = 107/160 (66%), Positives = 128/160 (80%), Gaps = 1/160 (0%)
 Frame = -3

Query: 477 MPSGMMIPARNMPPPMMGSNGRVSEYGXXXXXXS-QPNMFEDQSHLLDIINENTSRTEVA 301
           MP+G+MIPA +MP  MMG NG V+ YG        QPNM + Q H LD+  +NTS +E+A
Sbjct: 1   MPAGIMIPATHMPS-MMGRNGNVAAYGSSSGLSLGQPNMMDGQLHPLDM-TQNTSESEIA 58

Query: 300 APAKLIRDEEFDSNKSGSENYEGASGDEQDNPNERKRKKRYNRHTQHQIQEMESFFKECP 121
                +R+++FDS KSGSEN+EGASGD+QD PN+R +KKRY+RHTQHQIQEME+FFKECP
Sbjct: 59  R----LREDDFDS-KSGSENHEGASGDDQD-PNQRPKKKRYHRHTQHQIQEMEAFFKECP 112

Query: 120 HPDDKQRKELARELSLEPLQVKFWFQNKRTQVKNQHERVE 1
           HPDDKQRKEL+REL LEPLQVKFWFQNKRTQ+K QHER E
Sbjct: 113 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 152


>emb|CAN66212.1| hypothetical protein VITISV_013736 [Vitis vinifera]
          Length = 754

 Score =  206 bits (523), Expect = 3e-51
 Identities = 107/160 (66%), Positives = 128/160 (80%), Gaps = 1/160 (0%)
 Frame = -3

Query: 477 MPSGMMIPARNMPPPMMGSNGRVSEYGXXXXXXS-QPNMFEDQSHLLDIINENTSRTEVA 301
           MP+G+MIPA +MP  MMG NG V+ YG        QPNM + Q H LD+  +NTS +E+A
Sbjct: 1   MPAGIMIPATHMPS-MMGRNGNVAAYGSSSGLSLGQPNMMDGQLHPLDM-TQNTSESEIA 58

Query: 300 APAKLIRDEEFDSNKSGSENYEGASGDEQDNPNERKRKKRYNRHTQHQIQEMESFFKECP 121
                +R+++FDS KSGSEN+EGASGD+QD PN+R +KKRY+RHTQHQIQEME+FFKECP
Sbjct: 59  R----LREDDFDS-KSGSENHEGASGDDQD-PNQRPKKKRYHRHTQHQIQEMEAFFKECP 112

Query: 120 HPDDKQRKELARELSLEPLQVKFWFQNKRTQVKNQHERVE 1
           HPDDKQRKEL+REL LEPLQVKFWFQNKRTQ+K QHER E
Sbjct: 113 HPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 152


>ref|XP_002273837.2| PREDICTED: homeobox-leucine zipper protein HDG2 [Vitis vinifera]
          Length = 762

 Score =  193 bits (491), Expect = 1e-47
 Identities = 104/167 (62%), Positives = 123/167 (73%), Gaps = 13/167 (7%)
 Frame = -3

Query: 462 MIPARNMPPPMMGSNGRVSEYGXXXXXXS-------------QPNMFEDQSHLLDIINEN 322
           MIPA +MP  MMG NG V+ YG                    QPNM + Q H LD+  +N
Sbjct: 1   MIPATHMPS-MMGRNGNVAAYGSSSGLSLGQVRTQLLSCYMFQPNMMDGQLHPLDM-TQN 58

Query: 321 TSRTEVAAPAKLIRDEEFDSNKSGSENYEGASGDEQDNPNERKRKKRYNRHTQHQIQEME 142
           TS +E+A     +R+++FDS KSGSEN+EGASGD+QD PN+R +KKRY+RHTQHQIQEME
Sbjct: 59  TSESEIAR----LREDDFDS-KSGSENHEGASGDDQD-PNQRPKKKRYHRHTQHQIQEME 112

Query: 141 SFFKECPHPDDKQRKELARELSLEPLQVKFWFQNKRTQVKNQHERVE 1
           +FFKECPHPDDKQRKEL+REL LEPLQVKFWFQNKRTQ+K QHER E
Sbjct: 113 AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 159


>ref|XP_002302880.1| predicted protein [Populus trichocarpa] gi|222844606|gb|EEE82153.1|
           predicted protein [Populus trichocarpa]
          Length = 756

 Score =  184 bits (467), Expect = 8e-45
 Identities = 104/158 (65%), Positives = 116/158 (73%), Gaps = 4/158 (2%)
 Frame = -3

Query: 462 MIPARNMPPPMMGSNGRVSEYGXXXXXXS-QPNMFEDQS-HLLDIINENTSRTEVAAPAK 289
           MIPARNMP  M+G NG V  +G        QPNM E    H LD+ + NTS  ++     
Sbjct: 1   MIPARNMPS-MIGVNGNVGGFGSSSGLALGQPNMMEGHEFHHLDMTH-NTSEGDMTR--- 55

Query: 288 LIRDEEFDSN--KSGSENYEGASGDEQDNPNERKRKKRYNRHTQHQIQEMESFFKECPHP 115
            IRDEEFDS   KSGSEN EGASGD+QD    R +KKRY+RHTQHQIQEME+FFKECPHP
Sbjct: 56  -IRDEEFDSTNTKSGSENQEGASGDDQD---PRPKKKRYHRHTQHQIQEMEAFFKECPHP 111

Query: 114 DDKQRKELARELSLEPLQVKFWFQNKRTQVKNQHERVE 1
           DDKQRKEL+REL LEPLQVKFWFQNKRTQ+K QHER E
Sbjct: 112 DDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 149


>ref|XP_003543387.1| PREDICTED: homeobox-leucine zipper protein HDG2-like [Glycine max]
          Length = 781

 Score =  181 bits (460), Expect = 5e-44
 Identities = 105/180 (58%), Positives = 124/180 (68%), Gaps = 21/180 (11%)
 Frame = -3

Query: 477 MPSGMMIPARNMPPPMMGSNGRVSEYGXXXXXXS------------------QPNMFE-D 355
           MP+G+MIPARNMP  M+G NG V  +G                         QPN+ E  
Sbjct: 1   MPAGIMIPARNMPS-MIGRNGTVGGFGLSSGLSLGQIENHKASESQRSEEMFQPNLMEAG 59

Query: 354 QSHLLDIINENTSRTEVAAPAKLIRDEEFDS-NKSGSENYEGASGDEQD-NPNERKRKKR 181
           Q H LD+  +NTS ++V      IR+++FDS  KSGSEN EGASG++QD  PN   +KKR
Sbjct: 60  QLHPLDM-PQNTSESDVPR----IREDDFDSATKSGSENLEGASGEDQDPRPN---KKKR 111

Query: 180 YNRHTQHQIQEMESFFKECPHPDDKQRKELARELSLEPLQVKFWFQNKRTQVKNQHERVE 1
           Y+RHTQHQIQEME+FFKECPHPDDKQRKEL+REL LEPLQVKFWFQNKRTQ+K QHER E
Sbjct: 112 YHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHE 171


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