BLASTX nr result

ID: Coptis23_contig00031555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031555
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50
emb|CBI40732.3| unnamed protein product [Vitis vinifera]              198   4e-49
emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]   198   4e-49
ref|XP_003547276.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   177   1e-42
ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago ...   175   3e-42

>ref|XP_002307761.1| predicted protein [Populus trichocarpa] gi|222857210|gb|EEE94757.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score =  203 bits (517), Expect = 1e-50
 Identities = 90/154 (58%), Positives = 115/154 (74%)
 Frame = +2

Query: 2   YNVVIGGWAKLGRVNEIERFMKEMVDDGLSPDCLTFSYFIEGIGRAGRIEDAVKVFGKLS 181
           YNV+IGGW+K GRV+E++R  +EM +DG SPDCL+FSY +EG+GRAG+IEDAV +FG + 
Sbjct: 275 YNVIIGGWSKFGRVSEMQRVFEEMEEDGFSPDCLSFSYLLEGLGRAGKIEDAVMIFGSME 334

Query: 182 ENGCEADTTVYNAMISNFVSVREFDECMKYYKVMIEKGCSPGINTYTILINAFLKARRVX 361
           E GC  DT VYNAMISNF+SV  FDECMKYY+ ++ K C P I+TYT +I+  +KA +V 
Sbjct: 335 EKGCVPDTNVYNAMISNFISVGNFDECMKYYRCLLSKNCDPNIDTYTRMISGLIKASKVA 394

Query: 362 XXXXXXXXXXXKGIVPSTGTVTSFLEPLCRFGPP 463
                      +G+V  TGTVTSF+EPLC FGPP
Sbjct: 395 DALEMFDEMLDRGMVTKTGTVTSFIEPLCSFGPP 428


>emb|CBI40732.3| unnamed protein product [Vitis vinifera]
          Length = 520

 Score =  198 bits (503), Expect = 4e-49
 Identities = 86/154 (55%), Positives = 116/154 (75%)
 Frame = +2

Query: 2   YNVVIGGWAKLGRVNEIERFMKEMVDDGLSPDCLTFSYFIEGIGRAGRIEDAVKVFGKLS 181
           YN++IGGW+K G++ E+ER +K MV DG SP+CLTFS+ IEG+GRAGRI+DAV+VF  + 
Sbjct: 232 YNIIIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHME 291

Query: 182 ENGCEADTTVYNAMISNFVSVREFDECMKYYKVMIEKGCSPGINTYTILINAFLKARRVX 361
           E GC  +  VYNA+ISNF+S R+FDEC+KYY  M+   C P ++TYT LI AFLKAR+V 
Sbjct: 292 ETGCVPNACVYNALISNFISTRDFDECLKYYNFMVSSNCDPNMDTYTKLIVAFLKARKVA 351

Query: 362 XXXXXXXXXXXKGIVPSTGTVTSFLEPLCRFGPP 463
                      +G++P+TG +TSF+EPLC++GPP
Sbjct: 352 DALEMLDEMVGRGMIPTTGAITSFIEPLCQYGPP 385


>emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
          Length = 561

 Score =  198 bits (503), Expect = 4e-49
 Identities = 86/154 (55%), Positives = 116/154 (75%)
 Frame = +2

Query: 2   YNVVIGGWAKLGRVNEIERFMKEMVDDGLSPDCLTFSYFIEGIGRAGRIEDAVKVFGKLS 181
           YN++IGGW+K G++ E+ER +K MV DG SP+CLTFS+ IEG+GRAGRI+DAV+VF  + 
Sbjct: 273 YNIIIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHME 332

Query: 182 ENGCEADTTVYNAMISNFVSVREFDECMKYYKVMIEKGCSPGINTYTILINAFLKARRVX 361
           E GC  +  VYNA+ISNF+S R+FDEC+KYY  M+   C P ++TYT LI AFLKAR+V 
Sbjct: 333 ETGCVPNACVYNALISNFISTRDFDECLKYYNFMVSSNCDPNMDTYTKLIVAFLKARKVA 392

Query: 362 XXXXXXXXXXXKGIVPSTGTVTSFLEPLCRFGPP 463
                      +G++P+TG +TSF+EPLC++GPP
Sbjct: 393 DALEMLDEMVGRGMIPTTGAITSFIEPLCQYGPP 426


>ref|XP_003547276.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g43820-like [Glycine max]
          Length = 505

 Score =  177 bits (448), Expect = 1e-42
 Identities = 77/154 (50%), Positives = 108/154 (70%)
 Frame = +2

Query: 2   YNVVIGGWAKLGRVNEIERFMKEMVDDGLSPDCLTFSYFIEGIGRAGRIEDAVKVFGKLS 181
           YN V GGW++ GRV+E+ER M+EM  DGL PDC TF + IEG+GR GR+++AV++   + 
Sbjct: 217 YNAVAGGWSRFGRVSEVERVMREMEADGLRPDCRTFGFLIEGLGREGRMDEAVEILCGMK 276

Query: 182 ENGCEADTTVYNAMISNFVSVREFDECMKYYKVMIEKGCSPGINTYTILINAFLKARRVX 361
           E  C+ DT  YNA+I NFVSV +F+EC+KYY  M+   C P ++TY  +IN FL+AR+V 
Sbjct: 277 EMNCQPDTETYNAVIFNFVSVGDFEECIKYYNRMLSDNCEPNLDTYARMINRFLRARKVA 336

Query: 362 XXXXXXXXXXXKGIVPSTGTVTSFLEPLCRFGPP 463
                      +G+VPSTGT+T+F++ LC +GPP
Sbjct: 337 DALLMFDEMLRRGVVPSTGTITTFIKRLCSYGPP 370


>ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago truncatula]
           gi|124360397|gb|ABN08410.1| Pentatricopeptide repeat
           [Medicago truncatula] gi|355486664|gb|AES67867.1|
           hypothetical protein MTR_2g100200 [Medicago truncatula]
          Length = 527

 Score =  175 bits (444), Expect = 3e-42
 Identities = 81/154 (52%), Positives = 110/154 (71%)
 Frame = +2

Query: 2   YNVVIGGWAKLGRVNEIERFMKEMVDDGLSPDCLTFSYFIEGIGRAGRIEDAVKVFGKLS 181
           YNVV+GGW+KLGRVNEIE+ MKEM  +G SPD  T ++F+EG+GRAGR+++AV+VFG + 
Sbjct: 243 YNVVVGGWSKLGRVNEIEKVMKEMEVEGFSPDFNTLAFFLEGLGRAGRMDEAVEVFGSMK 302

Query: 182 ENGCEADTTVYNAMISNFVSVREFDECMKYYKVMIEKGCSPGINTYTILINAFLKARRVX 361
           E     DT +YNAMI NF+S+ +FD  MKYY  M+   C P I+TY+ +I AFL+ R+V 
Sbjct: 303 EK----DTAIYNAMIFNFISIGDFDGFMKYYNGMLSDNCEPNIHTYSRMITAFLRTRKVA 358

Query: 362 XXXXXXXXXXXKGIVPSTGTVTSFLEPLCRFGPP 463
                      +G+VP TGT+TSF++ LC +GPP
Sbjct: 359 DALLMFDEMLRQGVVPPTGTITSFIKQLCSYGPP 392


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