BLASTX nr result
ID: Coptis23_contig00031524
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00031524 (239 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002330559.1| predicted protein [Populus trichocarpa] gi|2... 63 3e-08 ref|XP_002300559.1| predicted protein [Populus trichocarpa] gi|2... 62 4e-08 ref|XP_002523168.1| ATP binding protein, putative [Ricinus commu... 59 5e-07 ref|XP_002281044.2| PREDICTED: uncharacterized protein LOC100261... 57 1e-06 emb|CAN66261.1| hypothetical protein VITISV_030975 [Vitis vinifera] 57 1e-06 >ref|XP_002330559.1| predicted protein [Populus trichocarpa] gi|222872117|gb|EEF09248.1| predicted protein [Populus trichocarpa] Length = 1681 Score = 62.8 bits (151), Expect = 3e-08 Identities = 41/76 (53%), Positives = 48/76 (63%), Gaps = 1/76 (1%) Frame = +2 Query: 14 ISGISSTLESLNGGSVRNKLQNSAIYSTSTSFSDRPSVGSQENNTFFVPRPDNIVE-NLK 190 ISGI S LESL GGS + LQ SAI S+S SFSD VGSQE FF P N+VE N + Sbjct: 748 ISGIDSKLESLLGGSNQKLLQTSAINSSSASFSDGQLVGSQERGPFF-PTSKNLVEDNFR 806 Query: 191 QGPTIPLLSAETTKLR 238 TI +S E TK++ Sbjct: 807 AQTTISGMSDEVTKVQ 822 >ref|XP_002300559.1| predicted protein [Populus trichocarpa] gi|222847817|gb|EEE85364.1| predicted protein [Populus trichocarpa] Length = 1716 Score = 62.4 bits (150), Expect = 4e-08 Identities = 41/79 (51%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Frame = +2 Query: 5 TKPISGISSTLESLNGGSVRNKLQNSAIYSTSTSFSDRPSVGSQENNTFFVPRPDNIV-E 181 T ISGI S LESL GGS R LQ SAI S+S SFSD VGSQE VP N+V E Sbjct: 785 TASISGIDSKLESLLGGSNRKLLQTSAINSSSASFSDGQLVGSQERGA-LVPTSKNLVEE 843 Query: 182 NLKQGPTIPLLSAETTKLR 238 N TI +S + TK++ Sbjct: 844 NFNAQTTISSMSGDVTKVQ 862 >ref|XP_002523168.1| ATP binding protein, putative [Ricinus communis] gi|223537575|gb|EEF39199.1| ATP binding protein, putative [Ricinus communis] Length = 1548 Score = 58.5 bits (140), Expect = 5e-07 Identities = 36/76 (47%), Positives = 44/76 (57%) Frame = +2 Query: 5 TKPISGISSTLESLNGGSVRNKLQNSAIYSTSTSFSDRPSVGSQENNTFFVPRPDNIVEN 184 T ISGI S L+SL+GGS + LQ+SA+ S+S SFSD VGSQE F + VE Sbjct: 641 TASISGIDSKLKSLDGGSSQKLLQSSAMNSSSASFSDGQLVGSQERGAFVPTSSEKKVEE 700 Query: 185 LKQGPTIPLLSAETTK 232 G T +S E TK Sbjct: 701 -NDGKTTSCMSGEVTK 715 >ref|XP_002281044.2| PREDICTED: uncharacterized protein LOC100261159 [Vitis vinifera] Length = 1460 Score = 57.4 bits (137), Expect = 1e-06 Identities = 38/80 (47%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Frame = +2 Query: 2 STKPISGISSTLESLNGGSVRNKLQNSAIYSTSTSFSDRPSVGSQENNTFFVPRPDNIV- 178 S ISGI S ESL GGS + LQ+SAI S+ SFSDR VGSQE F V + Sbjct: 499 SVGSISGIDSQSESLLGGSDQKMLQSSAINSSMASFSDRQLVGSQERGAFSVTTSTKLAE 558 Query: 179 ENLKQGPTIPLLSAETTKLR 238 EN PT S TK+R Sbjct: 559 ENSNPRPTSSRFSHGATKMR 578 >emb|CAN66261.1| hypothetical protein VITISV_030975 [Vitis vinifera] Length = 1100 Score = 57.4 bits (137), Expect = 1e-06 Identities = 38/80 (47%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Frame = +2 Query: 2 STKPISGISSTLESLNGGSVRNKLQNSAIYSTSTSFSDRPSVGSQENNTFFVPRPDNIV- 178 S ISGI S ESL GGS + LQ+SAI S+ SFSDR VGSQE F V + Sbjct: 533 SVGSISGIDSQSESLLGGSDQKMLQSSAINSSMASFSDRQLVGSQERGAFSVTTSTKLAE 592 Query: 179 ENLKQGPTIPLLSAETTKLR 238 EN PT S TK+R Sbjct: 593 ENSNPRPTSSRFSHGATKMR 612