BLASTX nr result

ID: Coptis23_contig00031524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031524
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330559.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002300559.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002523168.1| ATP binding protein, putative [Ricinus commu...    59   5e-07
ref|XP_002281044.2| PREDICTED: uncharacterized protein LOC100261...    57   1e-06
emb|CAN66261.1| hypothetical protein VITISV_030975 [Vitis vinifera]    57   1e-06

>ref|XP_002330559.1| predicted protein [Populus trichocarpa] gi|222872117|gb|EEF09248.1|
           predicted protein [Populus trichocarpa]
          Length = 1681

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 41/76 (53%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = +2

Query: 14  ISGISSTLESLNGGSVRNKLQNSAIYSTSTSFSDRPSVGSQENNTFFVPRPDNIVE-NLK 190
           ISGI S LESL GGS +  LQ SAI S+S SFSD   VGSQE   FF P   N+VE N +
Sbjct: 748 ISGIDSKLESLLGGSNQKLLQTSAINSSSASFSDGQLVGSQERGPFF-PTSKNLVEDNFR 806

Query: 191 QGPTIPLLSAETTKLR 238
              TI  +S E TK++
Sbjct: 807 AQTTISGMSDEVTKVQ 822


>ref|XP_002300559.1| predicted protein [Populus trichocarpa] gi|222847817|gb|EEE85364.1|
            predicted protein [Populus trichocarpa]
          Length = 1716

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/79 (51%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = +2

Query: 5    TKPISGISSTLESLNGGSVRNKLQNSAIYSTSTSFSDRPSVGSQENNTFFVPRPDNIV-E 181
            T  ISGI S LESL GGS R  LQ SAI S+S SFSD   VGSQE     VP   N+V E
Sbjct: 785  TASISGIDSKLESLLGGSNRKLLQTSAINSSSASFSDGQLVGSQERGA-LVPTSKNLVEE 843

Query: 182  NLKQGPTIPLLSAETTKLR 238
            N     TI  +S + TK++
Sbjct: 844  NFNAQTTISSMSGDVTKVQ 862


>ref|XP_002523168.1| ATP binding protein, putative [Ricinus communis]
           gi|223537575|gb|EEF39199.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1548

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/76 (47%), Positives = 44/76 (57%)
 Frame = +2

Query: 5   TKPISGISSTLESLNGGSVRNKLQNSAIYSTSTSFSDRPSVGSQENNTFFVPRPDNIVEN 184
           T  ISGI S L+SL+GGS +  LQ+SA+ S+S SFSD   VGSQE   F     +  VE 
Sbjct: 641 TASISGIDSKLKSLDGGSSQKLLQSSAMNSSSASFSDGQLVGSQERGAFVPTSSEKKVEE 700

Query: 185 LKQGPTIPLLSAETTK 232
              G T   +S E TK
Sbjct: 701 -NDGKTTSCMSGEVTK 715


>ref|XP_002281044.2| PREDICTED: uncharacterized protein LOC100261159 [Vitis vinifera]
          Length = 1460

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 38/80 (47%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = +2

Query: 2   STKPISGISSTLESLNGGSVRNKLQNSAIYSTSTSFSDRPSVGSQENNTFFVPRPDNIV- 178
           S   ISGI S  ESL GGS +  LQ+SAI S+  SFSDR  VGSQE   F V     +  
Sbjct: 499 SVGSISGIDSQSESLLGGSDQKMLQSSAINSSMASFSDRQLVGSQERGAFSVTTSTKLAE 558

Query: 179 ENLKQGPTIPLLSAETTKLR 238
           EN    PT    S   TK+R
Sbjct: 559 ENSNPRPTSSRFSHGATKMR 578


>emb|CAN66261.1| hypothetical protein VITISV_030975 [Vitis vinifera]
          Length = 1100

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 38/80 (47%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = +2

Query: 2   STKPISGISSTLESLNGGSVRNKLQNSAIYSTSTSFSDRPSVGSQENNTFFVPRPDNIV- 178
           S   ISGI S  ESL GGS +  LQ+SAI S+  SFSDR  VGSQE   F V     +  
Sbjct: 533 SVGSISGIDSQSESLLGGSDQKMLQSSAINSSMASFSDRQLVGSQERGAFSVTTSTKLAE 592

Query: 179 ENLKQGPTIPLLSAETTKLR 238
           EN    PT    S   TK+R
Sbjct: 593 ENSNPRPTSSRFSHGATKMR 612


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