BLASTX nr result

ID: Coptis23_contig00031504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031504
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330243.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
emb|CBI39569.3| unnamed protein product [Vitis vinifera]              110   9e-23
emb|CAN82842.1| hypothetical protein VITISV_019567 [Vitis vinifera]   110   9e-23
ref|XP_003549493.1| PREDICTED: uncharacterized protein LOC100803...   106   2e-21
ref|XP_002869655.1| calmodulin-binding protein [Arabidopsis lyra...   106   2e-21

>ref|XP_002330243.1| predicted protein [Populus trichocarpa] gi|222871699|gb|EEF08830.1|
           predicted protein [Populus trichocarpa]
          Length = 582

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/95 (56%), Positives = 72/95 (75%)
 Frame = +3

Query: 90  ETSRSRSVQLHFMTQLRNTLYTGNRIVGEDGEPIQIVVLDANSKRIVTTGPHSSIKIEMV 269
           +TS  R + L F+ +L  T++TG +I  ED +P+ IV++DAN+  IVT+GP +S+KIE+V
Sbjct: 81  QTSVKRGLMLQFVNKLPPTIFTGGKIEAEDDKPVTIVLMDANTNTIVTSGPLASLKIEIV 140

Query: 270 VLDGEFGSDAKEDWTAEEFDACVIREREGRRPLVT 374
            LD +FGSD +EDWT  EF A VIREREGRRPLVT
Sbjct: 141 PLDADFGSDDQEDWTESEFAARVIREREGRRPLVT 175


>emb|CBI39569.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/109 (51%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
 Frame = +3

Query: 54  FLHLFPR-SSLKLETSRSRSVQLHFMTQLRNTLYTGNRIVGEDGEPIQIVVLDANSKRIV 230
           FL+  P  SS ++E+S  R+ QLHF ++L + ++TG+R+  E    ++IV+LDA SK I+
Sbjct: 76  FLNASPGPSSNQIESSGVRNWQLHFASKLPSKIFTGSRVEAEGSTSVKIVILDARSKDII 135

Query: 231 TTGPHSSIKIEMVVLDGEFG-SDAKEDWTAEEFDACVIREREGRRPLVT 374
           T+GP SS+KIE++VLDG+FG +D  EDWT  EF+  ++REREG+RPLVT
Sbjct: 136 TSGPLSSVKIEILVLDGDFGTTDDNEDWTESEFNTNIVREREGKRPLVT 184


>emb|CAN82842.1| hypothetical protein VITISV_019567 [Vitis vinifera]
          Length = 586

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/109 (51%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
 Frame = +3

Query: 54  FLHLFPR-SSLKLETSRSRSVQLHFMTQLRNTLYTGNRIVGEDGEPIQIVVLDANSKRIV 230
           FL+  P  SS ++E+S  R+ QLHF ++L + ++TG+R+  E    ++IV+LDA SK I+
Sbjct: 74  FLNASPGPSSNQIESSGVRNWQLHFASKLPSKIFTGSRVEAEGSTSVKIVILDARSKDII 133

Query: 231 TTGPHSSIKIEMVVLDGEFG-SDAKEDWTAEEFDACVIREREGRRPLVT 374
           T+GP SS+KIE++VLDG+FG +D  EDWT  EF+  ++REREG+RPLVT
Sbjct: 134 TSGPLSSVKIEILVLDGDFGTTDDNEDWTESEFNTNIVREREGKRPLVT 182


>ref|XP_003549493.1| PREDICTED: uncharacterized protein LOC100803029 [Glycine max]
          Length = 627

 Score =  106 bits (265), Expect = 2e-21
 Identities = 47/96 (48%), Positives = 73/96 (76%)
 Frame = +3

Query: 87  LETSRSRSVQLHFMTQLRNTLYTGNRIVGEDGEPIQIVVLDANSKRIVTTGPHSSIKIEM 266
           +E    RS+QL F ++L   L+TG ++ GE G PI +V++DANS  IVT+GP S +K+++
Sbjct: 84  IEGPDGRSLQLKFRSRLSLPLFTGGKVEGEQGAPIHVVLIDANSGSIVTSGPESCVKLDV 143

Query: 267 VVLDGEFGSDAKEDWTAEEFDACVIREREGRRPLVT 374
           VVL+G+F ++  EDWT E+F++ V++EREG+RPL+T
Sbjct: 144 VVLEGDFNNEDDEDWTQEDFESHVVKEREGKRPLLT 179


>ref|XP_002869655.1| calmodulin-binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315491|gb|EFH45914.1| calmodulin-binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 600

 Score =  106 bits (264), Expect = 2e-21
 Identities = 46/90 (51%), Positives = 71/90 (78%)
 Frame = +3

Query: 105 RSVQLHFMTQLRNTLYTGNRIVGEDGEPIQIVVLDANSKRIVTTGPHSSIKIEMVVLDGE 284
           R++QLHF ++L   L+TG R+ G+ G  I +V++DAN++R VT GP +S+K+E+VVL G+
Sbjct: 81  RNLQLHFKSRLSLPLFTGGRVEGDQGAAIHVVLIDANTRRPVTVGPEASLKLEVVVLGGD 140

Query: 285 FGSDAKEDWTAEEFDACVIREREGRRPLVT 374
           F ++  EDWT EEF++ V++EREG+RPL+T
Sbjct: 141 FNNEDDEDWTQEEFESHVVKEREGKRPLLT 170


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