BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031495
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]   122   2e-26
ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26
gb|EAZ27917.1| hypothetical protein OsJ_11878 [Oryza sativa Japo...    91   1e-16
gb|EAY91181.1| hypothetical protein OsI_12790 [Oryza sativa Indi...    91   1e-16
ref|NP_001173562.1| Os03g0644100 [Oryza sativa Japonica Group] g...    91   1e-16

>emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]
          Length = 1817

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/100 (59%), Positives = 77/100 (77%)
 Frame = +2

Query: 125  RQALISFRLLNARGIKPTNFTLCTLLNSCTQLLYLRFGLQIHARILQTAWYQHNVFINTA 304
            R+AL SF  +N  G KPT F LCT LNSC +LL    G+QIHARI+QT  ++ N+F+N+A
Sbjct: 1298 REALESFXRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTG-FEDNLFLNSA 1356

Query: 305  LVNMYAKSNLILDAKSVFDAMEKHDHVSWTSIIAAYAQNG 424
            LV++YAK + I+DAK VFD MEKHD VSWTSII+ +++NG
Sbjct: 1357 LVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNG 1396



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/99 (37%), Positives = 61/99 (61%)
 Frame = +2

Query: 128  QALISFRLLNARGIKPTNFTLCTLLNSCTQLLYLRFGLQIHARILQTAWYQHNVFINTAL 307
            +AL  F  +   G+ PT+ TL ++LN+C  L  L+ G Q+H+ + +    + NVF+ +AL
Sbjct: 1502 EALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQGRQVHSLVAKMG-SESNVFVVSAL 1560

Query: 308  VNMYAKSNLILDAKSVFDAMEKHDHVSWTSIIAAYAQNG 424
            ++MY+K   I +A+ VF    + + V WTS+I  YAQ+G
Sbjct: 1561 LDMYSKCGSIDEARCVFXQAVEKNTVLWTSMITGYAQSG 1599


>ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 602

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/100 (59%), Positives = 77/100 (77%)
 Frame = +2

Query: 125 RQALISFRLLNARGIKPTNFTLCTLLNSCTQLLYLRFGLQIHARILQTAWYQHNVFINTA 304
           R+AL SF  +N  G KPT F LCT LNSC +LL    G+QIHARI+QT  ++ N+F+N+A
Sbjct: 83  REALESFWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTG-FEDNLFLNSA 141

Query: 305 LVNMYAKSNLILDAKSVFDAMEKHDHVSWTSIIAAYAQNG 424
           LV++YAK + I+DAK VFD MEKHD VSWTSII+ +++NG
Sbjct: 142 LVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNG 181



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/99 (38%), Positives = 62/99 (62%)
 Frame = +2

Query: 128 QALISFRLLNARGIKPTNFTLCTLLNSCTQLLYLRFGLQIHARILQTAWYQHNVFINTAL 307
           +AL  F  +   G+ PT+ TL ++LN+C  L  L+ G Q+H+ + +    + NVF+ +AL
Sbjct: 287 EALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQGRQVHSLVAKMG-SESNVFVVSAL 345

Query: 308 VNMYAKSNLILDAKSVFDAMEKHDHVSWTSIIAAYAQNG 424
           ++MY+K   I +A+ VFD   + + V WTS+I  YAQ+G
Sbjct: 346 LDMYSKCGSIDEARCVFDQAVEKNTVLWTSMITGYAQSG 384


>gb|EAZ27917.1| hypothetical protein OsJ_11878 [Oryza sativa Japonica Group]
          Length = 583

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/103 (39%), Positives = 69/103 (66%)
 Frame = +2

Query: 119 HFRQALISFRLLNARGIKPTNFTLCTLLNSCTQLLYLRFGLQIHARILQTAWYQHNVFIN 298
           H  QAL  F  + + G +P  FT+C++L +C +   +RFG Q+H  +L+   Y++++ I 
Sbjct: 228 HGGQALRMFSEMVSEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKM-YKNDIHIG 286

Query: 299 TALVNMYAKSNLILDAKSVFDAMEKHDHVSWTSIIAAYAQNGH 427
           +ALV MYA+   + DA++VFD M + + ++WTS+I+ YAQ+GH
Sbjct: 287 SALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMISGYAQSGH 329



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/104 (37%), Positives = 65/104 (62%)
 Frame = +2

Query: 113 LDHFRQALISFRLLNARGIKPTNFTLCTLLNSCTQLLYLRFGLQIHARILQTAWYQHNVF 292
           L H  +AL S   +   G+KP  +T  + L +C +L  L++G +IH  + +T  +  NVF
Sbjct: 428 LGHNVEALKSLDDMLWDGVKPNTYTYSSALKACAKLEALQYGRKIHGFVNKTQDFS-NVF 486

Query: 293 INTALVNMYAKSNLILDAKSVFDAMEKHDHVSWTSIIAAYAQNG 424
           + ++L++MY +   + +A+SVFDAM +H+ V+W  II  +AQNG
Sbjct: 487 VGSSLIDMYMRCGKVDEARSVFDAMPEHNLVTWKVIITGFAQNG 530



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/105 (31%), Positives = 58/105 (55%)
 Frame = +2

Query: 113 LDHFRQALISFRLLNARGIKPTNFTLCTLLNSCTQLLYLRFGLQIHARILQTAWYQHNVF 292
           L H+ + +  F  +   G++  + T   LL SC +    + G Q+H  I++  W   NV 
Sbjct: 126 LGHYGEVVRLFFDMVGSGVQGNSLTFVCLLKSCGERCDAKLGQQVHCCIVKGGW--SNVI 183

Query: 293 INTALVNMYAKSNLILDAKSVFDAMEKHDHVSWTSIIAAYAQNGH 427
           +++A+ + YA+   +  A ++FD M   D +SWT++I AY Q+GH
Sbjct: 184 VDSAIAHFYAQCGDVASASAIFDKMAYRDVISWTTMITAYVQHGH 228



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/103 (31%), Positives = 55/103 (53%)
 Frame = +2

Query: 119 HFRQALISFRLLNARGIKPTNFTLCTLLNSCTQLLYLRFGLQIHARILQTAWYQHNVFIN 298
           H  +A++ FR +  R +   N T+  LL++C  L     G ++HA+I++ +  + N+ I 
Sbjct: 329 HGEKAILLFRKMKMRRVFVNNLTIVGLLSACGSLQSPYLGKELHAQIIKNSM-EENLQIG 387

Query: 299 TALVNMYAKSNLILDAKSVFDAMEKHDHVSWTSIIAAYAQNGH 427
           + LV  Y K      A  + +AM   D +SWT++I+ Y   GH
Sbjct: 388 STLVWFYCKCGEYTYAARILEAMPDRDAISWTALISGYNNLGH 430


>gb|EAY91181.1| hypothetical protein OsI_12790 [Oryza sativa Indica Group]
          Length = 885

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/103 (39%), Positives = 69/103 (66%)
 Frame = +2

Query: 119 HFRQALISFRLLNARGIKPTNFTLCTLLNSCTQLLYLRFGLQIHARILQTAWYQHNVFIN 298
           H  QAL  F  + + G +P  FT+C++L +C +   +RFG Q+H  +L+   Y++++ I 
Sbjct: 530 HGGQALRMFSEMVSEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKM-YKNDIHIG 588

Query: 299 TALVNMYAKSNLILDAKSVFDAMEKHDHVSWTSIIAAYAQNGH 427
           +ALV MYA+   + DA++VFD M + + ++WTS+I+ YAQ+GH
Sbjct: 589 SALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMISGYAQSGH 631



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/104 (36%), Positives = 64/104 (61%)
 Frame = +2

Query: 113  LDHFRQALISFRLLNARGIKPTNFTLCTLLNSCTQLLYLRFGLQIHARILQTAWYQHNVF 292
            L H  +AL S   +   G+KP  +T  + L +C +L  L++G +IH  + +T  +  NVF
Sbjct: 730  LGHNVEALKSLDDMLWDGVKPNTYTYSSALKACAKLEALQYGRKIHGFVNKTQDFS-NVF 788

Query: 293  INTALVNMYAKSNLILDAKSVFDAMEKHDHVSWTSIIAAYAQNG 424
            + ++L++MY +   + +A+ VFDAM +H+ V+W  II  +AQNG
Sbjct: 789  VGSSLIDMYMRCGKVDEARRVFDAMPEHNLVTWKVIITGFAQNG 832



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/110 (30%), Positives = 59/110 (53%)
 Frame = +2

Query: 98  NNMTTLDHFRQALISFRLLNARGIKPTNFTLCTLLNSCTQLLYLRFGLQIHARILQTAWY 277
           N    L H+ + +  F  +   G++  + T   LL SC +    + G Q+H  I++  W 
Sbjct: 423 NAYLKLGHYGEVVRLFFDMVGSGVQGNSLTFVCLLKSCGERCDAKLGQQVHCCIVKGGW- 481

Query: 278 QHNVFINTALVNMYAKSNLILDAKSVFDAMEKHDHVSWTSIIAAYAQNGH 427
             NV +++A+ + YA+   +  A ++FD M   D +SWT++I AY Q+GH
Sbjct: 482 -SNVIVDSAIAHFYAQCGDVASASAIFDKMASRDVISWTTMITAYVQHGH 530



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/103 (32%), Positives = 55/103 (53%)
 Frame = +2

Query: 119 HFRQALISFRLLNARGIKPTNFTLCTLLNSCTQLLYLRFGLQIHARILQTAWYQHNVFIN 298
           H  +A+  FR +  R +   N T+  LL++C  L  L  G ++HA+I++ +  + N+ I 
Sbjct: 631 HGEKAIFLFRKMKMRRVFVNNLTIVGLLSACGSLQSLYLGKELHAQIIKNSM-EDNLQIG 689

Query: 299 TALVNMYAKSNLILDAKSVFDAMEKHDHVSWTSIIAAYAQNGH 427
           + LV  Y K      A  + +AM   D +SWT++I+ Y   GH
Sbjct: 690 STLVWFYCKCGEYTYAARILEAMPDRDAISWTALISGYNNLGH 732


>ref|NP_001173562.1| Os03g0644100 [Oryza sativa Japonica Group]
           gi|53749418|gb|AAU90276.1| PPR repeat containing protein
           [Oryza sativa Japonica Group]
           gi|108710059|gb|ABF97854.1| PPR986-12, putative,
           expressed [Oryza sativa Japonica Group]
           gi|215707171|dbj|BAG93631.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|255674740|dbj|BAH92290.1| Os03g0644100 [Oryza sativa
           Japonica Group]
          Length = 616

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/103 (39%), Positives = 69/103 (66%)
 Frame = +2

Query: 119 HFRQALISFRLLNARGIKPTNFTLCTLLNSCTQLLYLRFGLQIHARILQTAWYQHNVFIN 298
           H  QAL  F  + + G +P  FT+C++L +C +   +RFG Q+H  +L+   Y++++ I 
Sbjct: 261 HGGQALRMFSEMVSEGFRPNEFTVCSVLKACAEEKAVRFGKQLHCAVLKKM-YKNDIHIG 319

Query: 299 TALVNMYAKSNLILDAKSVFDAMEKHDHVSWTSIIAAYAQNGH 427
           +ALV MYA+   + DA++VFD M + + ++WTS+I+ YAQ+GH
Sbjct: 320 SALVTMYARCGEVFDAQAVFDMMPRRNTITWTSMISGYAQSGH 362



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/104 (37%), Positives = 65/104 (62%)
 Frame = +2

Query: 113 LDHFRQALISFRLLNARGIKPTNFTLCTLLNSCTQLLYLRFGLQIHARILQTAWYQHNVF 292
           L H  +AL S   +   G+KP  +T  + L +C +L  L++G +IH  + +T  +  NVF
Sbjct: 461 LGHNVEALKSLDDMLWDGVKPNTYTYSSALKACAKLEALQYGRKIHGFVNKTQDFS-NVF 519

Query: 293 INTALVNMYAKSNLILDAKSVFDAMEKHDHVSWTSIIAAYAQNG 424
           + ++L++MY +   + +A+SVFDAM +H+ V+W  II  +AQNG
Sbjct: 520 VGSSLIDMYMRCGKVDEARSVFDAMPEHNLVTWKVIITGFAQNG 563



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/105 (31%), Positives = 58/105 (55%)
 Frame = +2

Query: 113 LDHFRQALISFRLLNARGIKPTNFTLCTLLNSCTQLLYLRFGLQIHARILQTAWYQHNVF 292
           L H+ + +  F  +   G++  + T   LL SC +    + G Q+H  I++  W   NV 
Sbjct: 159 LGHYGEVVRLFFDMVGSGVQGNSLTFVCLLKSCGERCDAKLGQQVHCCIVKGGW--SNVI 216

Query: 293 INTALVNMYAKSNLILDAKSVFDAMEKHDHVSWTSIIAAYAQNGH 427
           +++A+ + YA+   +  A ++FD M   D +SWT++I AY Q+GH
Sbjct: 217 VDSAIAHFYAQCGDVASASAIFDKMAYRDVISWTTMITAYVQHGH 261



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/103 (31%), Positives = 55/103 (53%)
 Frame = +2

Query: 119 HFRQALISFRLLNARGIKPTNFTLCTLLNSCTQLLYLRFGLQIHARILQTAWYQHNVFIN 298
           H  +A++ FR +  R +   N T+  LL++C  L     G ++HA+I++ +  + N+ I 
Sbjct: 362 HGEKAILLFRKMKMRRVFVNNLTIVGLLSACGSLQSPYLGKELHAQIIKNSM-EENLQIG 420

Query: 299 TALVNMYAKSNLILDAKSVFDAMEKHDHVSWTSIIAAYAQNGH 427
           + LV  Y K      A  + +AM   D +SWT++I+ Y   GH
Sbjct: 421 STLVWFYCKCGEYTYAARILEAMPDRDAISWTALISGYNNLGH 463