BLASTX nr result

ID: Coptis23_contig00031487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031487
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266645.2| PREDICTED: leucine-rich repeat-containing pr...   384   e-104
emb|CAN71340.1| hypothetical protein VITISV_043793 [Vitis vinifera]   384   e-104
dbj|BAI63588.1| leucine rich repeat protein [Lotus japonicus]         383   e-104
emb|CBI17882.3| unnamed protein product [Vitis vinifera]              380   e-103
ref|XP_002518243.1| leucine-rich repeat-containing protein, puta...   372   e-101

>ref|XP_002266645.2| PREDICTED: leucine-rich repeat-containing protein 40-like [Vitis
           vinifera]
          Length = 351

 Score =  384 bits (985), Expect = e-104
 Identities = 201/316 (63%), Positives = 240/316 (75%), Gaps = 1/316 (0%)
 Frame = -3

Query: 955 VDLSGRXXXXXXXXXXXXXLIHKLDLSNNNLENIPESLAARLLNMVILDLHSNQLKSLPN 776
           VDLSG               I KLDL NNNL+NIPESL ARLLN+VILD+HSNQLKSLPN
Sbjct: 39  VDLSGMSLDALPNPSLNLAAICKLDLCNNNLQNIPESLTARLLNVVILDVHSNQLKSLPN 98

Query: 775 SIGCLYKLKFLNASGNSLESLPKTIENCRSLEELNANFNKLKSLPETMGFEXXXXXXXXX 596
           SIGCL KLK LN SGN +++LPKTIENCRSLEELNANFN+L  LP+T+GFE         
Sbjct: 99  SIGCLSKLKVLNISGNLIQNLPKTIENCRSLEELNANFNQLTMLPDTIGFELLNIKKLSV 158

Query: 595 XXXXXVFLPYSLTHLTNLRILDARLNCLRSLPDGXXXXXXXXXXNVSQNFQYLGALPYSI 416
                + LP S +HLT+L++LDARLNCLR+LP+           NVSQNFQYL  LPYSI
Sbjct: 159 NSNKLMLLPSSTSHLTSLQVLDARLNCLRALPEDLENLINLQVLNVSQNFQYLETLPYSI 218

Query: 415 GLLMSLIELDVSYNKITTLPNSIGCLRKLDKLCVEGNPLVTPPMEVIRQGVGAVKEFLSD 236
           GLLMSL+ELD SYN+ITTLP+S+GCL+KL KLCVEGNPLV+PPMEV+ QG+ AVKE+LS+
Sbjct: 219 GLLMSLVELDASYNRITTLPDSMGCLKKLQKLCVEGNPLVSPPMEVVEQGMQAVKEYLSE 278

Query: 235 RMNNSPK-SPSKNKWIGKLTRWKTFSGEYSNNSPREDRDGNFVLSDFQSINGLASPRFSG 59
           +M  + + SP K  WIGKL R+ TF+G  +NN+ RE+R+G F+ SD++SI GLA+PR  G
Sbjct: 279 KMTAAHRCSPKKKSWIGKLVRYGTFNG--TNNASREEREG-FLRSDYRSIEGLATPRSVG 335

Query: 58  MFSPRRLFSPRTYFSK 11
           MFSPRRLFSPR YFSK
Sbjct: 336 MFSPRRLFSPRNYFSK 351


>emb|CAN71340.1| hypothetical protein VITISV_043793 [Vitis vinifera]
          Length = 355

 Score =  384 bits (985), Expect = e-104
 Identities = 201/316 (63%), Positives = 240/316 (75%), Gaps = 1/316 (0%)
 Frame = -3

Query: 955 VDLSGRXXXXXXXXXXXXXLIHKLDLSNNNLENIPESLAARLLNMVILDLHSNQLKSLPN 776
           VDLSG               I KLDL NNNL+NIPESL ARLLN+VILD+HSNQLKSLPN
Sbjct: 43  VDLSGMSLDALPNPSLNLAAICKLDLCNNNLQNIPESLTARLLNVVILDVHSNQLKSLPN 102

Query: 775 SIGCLYKLKFLNASGNSLESLPKTIENCRSLEELNANFNKLKSLPETMGFEXXXXXXXXX 596
           SIGCL KLK LN SGN +++LPKTIENCRSLEELNANFN+L  LP+T+GFE         
Sbjct: 103 SIGCLSKLKVLNISGNLIQNLPKTIENCRSLEELNANFNQLTMLPDTIGFELLNIKKLSV 162

Query: 595 XXXXXVFLPYSLTHLTNLRILDARLNCLRSLPDGXXXXXXXXXXNVSQNFQYLGALPYSI 416
                + LP S +HLT+L++LDARLNCLR+LP+           NVSQNFQYL  LPYSI
Sbjct: 163 NSNKLMLLPSSTSHLTSLQVLDARLNCLRALPEDLENLINLQVLNVSQNFQYLETLPYSI 222

Query: 415 GLLMSLIELDVSYNKITTLPNSIGCLRKLDKLCVEGNPLVTPPMEVIRQGVGAVKEFLSD 236
           GLLMSL+ELD SYN+ITTLP+S+GCL+KL KLCVEGNPLV+PPMEV+ QG+ AVKE+LS+
Sbjct: 223 GLLMSLVELDASYNRITTLPDSMGCLKKLQKLCVEGNPLVSPPMEVVEQGMQAVKEYLSE 282

Query: 235 RMNNSPK-SPSKNKWIGKLTRWKTFSGEYSNNSPREDRDGNFVLSDFQSINGLASPRFSG 59
           +M  + + SP K  WIGKL R+ TF+G  +NN+ RE+R+G F+ SD++SI GLA+PR  G
Sbjct: 283 KMTAAHRCSPKKKSWIGKLVRYGTFNG--TNNASREEREG-FLRSDYRSIEGLATPRSVG 339

Query: 58  MFSPRRLFSPRTYFSK 11
           MFSPRRLFSPR YFSK
Sbjct: 340 MFSPRRLFSPRNYFSK 355


>dbj|BAI63588.1| leucine rich repeat protein [Lotus japonicus]
          Length = 350

 Score =  383 bits (983), Expect = e-104
 Identities = 197/315 (62%), Positives = 242/315 (76%), Gaps = 1/315 (0%)
 Frame = -3

Query: 955 VDLSGRXXXXXXXXXXXXXLIHKLDLSNNNLENIPESLAARLLNMVILDLHSNQLKSLPN 776
           VDLSG              +I KLDLSNNNL+NIPESL ARLLNMV+LD+HSNQL+SLPN
Sbjct: 36  VDLSGMSLESLPNPSLNLAIICKLDLSNNNLQNIPESLTARLLNMVVLDVHSNQLRSLPN 95

Query: 775 SIGCLYKLKFLNASGNSLESLPKTIENCRSLEELNANFNKLKSLPETMGFEXXXXXXXXX 596
           S+GCL KLK LN SGN +E LPK+IENCR+LEELNANFNKL  LP+TMGFE         
Sbjct: 96  SVGCLSKLKVLNVSGNLIEYLPKSIENCRALEELNANFNKLSQLPDTMGFELLNLKKLSV 155

Query: 595 XXXXXVFLPYSLTHLTNLRILDARLNCLRSLPDGXXXXXXXXXXNVSQNFQYLGALPYSI 416
                VFLP S +HLT+L+ILDARLNCLRSLPD           NVSQNFQYL  LPYSI
Sbjct: 156 NSNKLVFLPRSTSHLTSLKILDARLNCLRSLPDDLENLINLETLNVSQNFQYLDTLPYSI 215

Query: 415 GLLMSLIELDVSYNKITTLPNSIGCLRKLDKLCVEGNPLVTPPMEVIRQGVGAVKEFLSD 236
           GLL+SL+ELDVSYN++ +LP+SIGCL+KL KL VEGNPLV+PP EV+ QG+ AVKE+L +
Sbjct: 216 GLLLSLVELDVSYNRVKSLPDSIGCLKKLQKLSVEGNPLVSPPPEVVEQGLHAVKEYLCN 275

Query: 235 RMNNSPKSPSKNK-WIGKLTRWKTFSGEYSNNSPREDRDGNFVLSDFQSINGLASPRFSG 59
           +MN++ +SP+K K W+GKL ++ TF+G ++ + PRE+R+   V  +++SI+GLASPR+ G
Sbjct: 276 KMNSAHQSPTKKKSWVGKLVKYGTFNG-HARSGPREEREAFIVDHEYRSIDGLASPRYMG 334

Query: 58  MFSPRRLFSPRTYFS 14
           MFSPRRLFSPR+YFS
Sbjct: 335 MFSPRRLFSPRSYFS 349



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
 Frame = -3

Query: 757 KLKFLNASGNSLESLPKTIENCRSLEELNANFNKLKSLPETMGFEXXXXXXXXXXXXXXV 578
           KL+ ++ SG SLESLP    N   + +L+ + N L+++PE++                  
Sbjct: 32  KLEIVDLSGMSLESLPNPSLNLAIICKLDLSNNNLQNIPESL------------------ 73

Query: 577 FLPYSLTHLTNLRILDARLNCLRSLPDGXXXXXXXXXXNVSQNFQYLGALPYSIGLLMSL 398
                   L N+ +LD   N LRSLP+           NVS N   +  LP SI    +L
Sbjct: 74  -----TARLLNMVVLDVHSNQLRSLPNSVGCLSKLKVLNVSGNL--IEYLPKSIENCRAL 126

Query: 397 IELDVSYNKITTLPNSIGC-LRKLDKLCVEGNPLVTPP 287
            EL+ ++NK++ LP+++G  L  L KL V  N LV  P
Sbjct: 127 EELNANFNKLSQLPDTMGFELLNLKKLSVNSNKLVFLP 164


>emb|CBI17882.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  380 bits (976), Expect = e-103
 Identities = 196/296 (66%), Positives = 235/296 (79%), Gaps = 1/296 (0%)
 Frame = -3

Query: 895 IHKLDLSNNNLENIPESLAARLLNMVILDLHSNQLKSLPNSIGCLYKLKFLNASGNSLES 716
           I KLDL NNNL+NIPESL ARLLN+VILD+HSNQLKSLPNSIGCL KLK LN SGN +++
Sbjct: 16  ICKLDLCNNNLQNIPESLTARLLNVVILDVHSNQLKSLPNSIGCLSKLKVLNISGNLIQN 75

Query: 715 LPKTIENCRSLEELNANFNKLKSLPETMGFEXXXXXXXXXXXXXXVFLPYSLTHLTNLRI 536
           LPKTIENCRSLEELNANFN+L  LP+T+GFE              + LP S +HLT+L++
Sbjct: 76  LPKTIENCRSLEELNANFNQLTMLPDTIGFELLNIKKLSVNSNKLMLLPSSTSHLTSLQV 135

Query: 535 LDARLNCLRSLPDGXXXXXXXXXXNVSQNFQYLGALPYSIGLLMSLIELDVSYNKITTLP 356
           LDARLNCLR+LP+           NVSQNFQYL  LPYSIGLLMSL+ELD SYN+ITTLP
Sbjct: 136 LDARLNCLRALPEDLENLINLQVLNVSQNFQYLETLPYSIGLLMSLVELDASYNRITTLP 195

Query: 355 NSIGCLRKLDKLCVEGNPLVTPPMEVIRQGVGAVKEFLSDRMNNSPK-SPSKNKWIGKLT 179
           +S+GCL+KL KLCVEGNPLV+PPMEV+ QG+ AVKE+LS++M  + + SP K  WIGKL 
Sbjct: 196 DSMGCLKKLQKLCVEGNPLVSPPMEVVEQGMQAVKEYLSEKMTAAHRCSPKKKSWIGKLV 255

Query: 178 RWKTFSGEYSNNSPREDRDGNFVLSDFQSINGLASPRFSGMFSPRRLFSPRTYFSK 11
           R+ TF+G  +NN+ RE+R+G F+ SD++SI GLA+PR  GMFSPRRLFSPR YFSK
Sbjct: 256 RYGTFNG--TNNASREEREG-FLRSDYRSIEGLATPRSVGMFSPRRLFSPRNYFSK 308


>ref|XP_002518243.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223542590|gb|EEF44129.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 353

 Score =  372 bits (956), Expect = e-101
 Identities = 198/316 (62%), Positives = 231/316 (73%), Gaps = 3/316 (0%)
 Frame = -3

Query: 955 VDLSGRXXXXXXXXXXXXXLIHKLDLSNNNLENIPESLAARLLNMVILDLHSNQLKSLPN 776
           VDLSG               I KLDLSNNNL++IPESL ARLLN+VILD+HSNQLKSLPN
Sbjct: 37  VDLSGMSLDTLPSPSLNLATICKLDLSNNNLQSIPESLTARLLNIVILDVHSNQLKSLPN 96

Query: 775 SIGCLYKLKFLNASGNSLESLPKTIENCRSLEELNANFNKLKSLPETMGFEXXXXXXXXX 596
           SIGCL KLK LN +GN L  LPKTIENCRSLEELNANFNKL  LP T+GFE         
Sbjct: 97  SIGCLSKLKVLNVAGNLLACLPKTIENCRSLEELNANFNKLSVLPNTIGFELVNLKKLSV 156

Query: 595 XXXXXVFLPYSLTHLTNLRILDARLNCLRSLPDGXXXXXXXXXXNVSQNFQYLGALPYSI 416
                VFLP+S+THLT+L+ LDARLN LRSLP+           NVSQNFQYL  LPYSI
Sbjct: 157 NSNKLVFLPHSITHLTSLKTLDARLNNLRSLPEDLENLINLKVLNVSQNFQYLETLPYSI 216

Query: 415 GLLMSLIELDVSYNKITTLPNSIGCLRKLDKLCVEGNPLVTPPMEVIRQGVGAVKEFLSD 236
           GLL SLIELD+SYN+IT+LPNSIGCLRKL KL VEGNPLV+PPMEV+ QG+  VKE+LS+
Sbjct: 217 GLLFSLIELDISYNRITSLPNSIGCLRKLQKLSVEGNPLVSPPMEVVEQGLHTVKEYLSE 276

Query: 235 RMNNSPKSPSKNK-WIGKLTRWKTFSGEYSN--NSPREDRDGNFVLSDFQSINGLASPRF 65
           +MN   KSP K K W+GKL ++ TF+G   N  NS   +    F++S+++SI+GLASP +
Sbjct: 277 KMNAGHKSPQKKKSWVGKLVKYGTFNGSTRNQINSTNNEERKAFIMSEYRSIDGLASPSY 336

Query: 64  SGMFSPRRLFSPRTYF 17
            GMFSPRRLFSP+  F
Sbjct: 337 MGMFSPRRLFSPKNIF 352



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 1/184 (0%)
 Frame = -3

Query: 757 KLKFLNASGNSLESLPKTIENCRSLEELNANFNKLKSLPETMGFEXXXXXXXXXXXXXXV 578
           KL+ ++ SG SL++LP    N  ++ +L+ + N L+S+PE++                  
Sbjct: 33  KLEIVDLSGMSLDTLPSPSLNLATICKLDLSNNNLQSIPESL------------------ 74

Query: 577 FLPYSLTHLTNLRILDARLNCLRSLPDGXXXXXXXXXXNVSQNFQYLGALPYSIGLLMSL 398
                   L N+ ILD   N L+SLP+           NV+ N   L  LP +I    SL
Sbjct: 75  -----TARLLNIVILDVHSNQLKSLPNSIGCLSKLKVLNVAGNL--LACLPKTIENCRSL 127

Query: 397 IELDVSYNKITTLPNSIGC-LRKLDKLCVEGNPLVTPPMEVIRQGVGAVKEFLSDRMNNS 221
            EL+ ++NK++ LPN+IG  L  L KL V  N LV  P  +    + ++K  L  R+NN 
Sbjct: 128 EELNANFNKLSVLPNTIGFELVNLKKLSVNSNKLVFLPHSITH--LTSLKT-LDARLNNL 184

Query: 220 PKSP 209
              P
Sbjct: 185 RSLP 188


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