BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031485
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002887103.1| hypothetical protein ARALYDRAFT_894439 [Arab...    92   3e-17
ref|YP_003330957.1| photosystem II protein D2 [Parthenium argent...    92   3e-17
dbj|BAE47589.1| photosystem II protein D2 [Lactuca sativa]             90   2e-16
gb|AAS46043.1| photosystem II protein D2 [Oryza sativa Indica Gr...    89   3e-16
gb|ADD63025.1| photosystem II protein D2 [Potamophila parviflora]      87   1e-15

>ref|XP_002887103.1| hypothetical protein ARALYDRAFT_894439 [Arabidopsis lyrata subsp.
           lyrata] gi|297332944|gb|EFH63362.1| hypothetical protein
           ARALYDRAFT_894439 [Arabidopsis lyrata subsp. lyrata]
          Length = 286

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/45 (93%), Positives = 44/45 (97%)
 Frame = -2

Query: 137 LNRRITMTIALGRFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLF 3
           +NRRI MTIALG+FTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLF
Sbjct: 1   MNRRIAMTIALGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLF 45


>ref|YP_003330957.1| photosystem II protein D2 [Parthenium argentatum]
           gi|269924833|gb|ACZ52706.1| photosystem II protein D2
           [Parthenium argentatum]
          Length = 199

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/45 (93%), Positives = 44/45 (97%)
 Frame = -2

Query: 137 LNRRITMTIALGRFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLF 3
           +NRRITMTIALG+FTKDE DLFDIMDDWLRRDRFVFVGWSGLLLF
Sbjct: 1   MNRRITMTIALGKFTKDENDLFDIMDDWLRRDRFVFVGWSGLLLF 45


>dbj|BAE47589.1| photosystem II protein D2 [Lactuca sativa]
          Length = 359

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = -2

Query: 137 LNRRITMTIALGRFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLF 3
           +NRRITMTIALG+ TKDE DLFDIMDDWLRRDRFVFVGWSGLLLF
Sbjct: 1   MNRRITMTIALGKVTKDENDLFDIMDDWLRRDRFVFVGWSGLLLF 45


>gb|AAS46043.1| photosystem II protein D2 [Oryza sativa Indica Group]
           gi|42795542|gb|AAS46108.1| photosystem II protein D2
           [Oryza sativa Japonica Group] gi|42795606|gb|AAS46171.1|
           photosystem II protein D2 [Oryza sativa Japonica Group]
           gi|290790561|gb|ADD62821.1| photosystem II protein D2
           [Oryza sativa Japonica Group]
           gi|290790630|gb|ADD62889.1| photosystem II protein D2
           [Oryza meridionalis] gi|290790699|gb|ADD62957.1|
           photosystem II protein D2 [Oryza australiensis]
           gi|290790836|gb|ADD63092.1| photosystem II protein D2
           [Microlaena stipoides]
          Length = 359

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/45 (91%), Positives = 43/45 (95%)
 Frame = -2

Query: 137 LNRRITMTIALGRFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLF 3
           +NRRITMTIALGR TK+E DLFDIMDDWLRRDRFVFVGWSGLLLF
Sbjct: 1   MNRRITMTIALGRVTKEENDLFDIMDDWLRRDRFVFVGWSGLLLF 45


>gb|ADD63025.1| photosystem II protein D2 [Potamophila parviflora]
          Length = 359

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/45 (88%), Positives = 42/45 (93%)
 Frame = -2

Query: 137 LNRRITMTIALGRFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLF 3
           +NRRITMTIALGR  K+E DLFDIMDDWLRRDRFVFVGWSGLLLF
Sbjct: 1   MNRRITMTIALGRVAKEENDLFDIMDDWLRRDRFVFVGWSGLLLF 45