BLASTX nr result
ID: Coptis23_contig00031478
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00031478 (342 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAZ31757.1| hypothetical protein OsJ_15911 [Oryza sativa Japo... 63 3e-08 gb|EAY95291.1| hypothetical protein OsI_17117 [Oryza sativa Indi... 63 3e-08 ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|2... 59 4e-07 ref|XP_002323425.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-06 emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera] 55 6e-06 >gb|EAZ31757.1| hypothetical protein OsJ_15911 [Oryza sativa Japonica Group] Length = 234 Score = 62.8 bits (151), Expect = 3e-08 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 1/100 (1%) Frame = +2 Query: 41 GWLTLPDHLLDLIVERLS-FPDLIRFGCVCKKWRSLCGPLQFRNHLPWLIVPHQDYVTSK 217 GW LPD LLD + +R + D +R VCK WRS P R+ PWL++P+ Sbjct: 4 GWAQLPDDLLDNVAQRTAGIKDYVRLRAVCKSWRSFLRP---RSRPPWLMLPYDP----- 55 Query: 218 PGTMAYDSKDVGFFSLCDRNIYKADIPELTNRRICGSFQG 337 +S GF D +++ D+P+ +R CGS G Sbjct: 56 ----CSESCVRGFLDASDGTVHEIDLPDTRGKRCCGSSHG 91 >gb|EAY95291.1| hypothetical protein OsI_17117 [Oryza sativa Indica Group] Length = 334 Score = 62.8 bits (151), Expect = 3e-08 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 1/100 (1%) Frame = +2 Query: 41 GWLTLPDHLLDLIVERLS-FPDLIRFGCVCKKWRSLCGPLQFRNHLPWLIVPHQDYVTSK 217 GW LPD LLD + +R + D +R VCK WRS P R+ PWL++P+ Sbjct: 4 GWAQLPDDLLDNVAQRTAGIKDYVRLRAVCKSWRSFLRP---RSRPPWLMLPYDP----- 55 Query: 218 PGTMAYDSKDVGFFSLCDRNIYKADIPELTNRRICGSFQG 337 +S GF D +++ D+P+ +R CGS G Sbjct: 56 ----CSESCVRGFLDASDGTVHEIDLPDTRGKRCCGSSHG 91 >ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|222842402|gb|EEE79949.1| predicted protein [Populus trichocarpa] Length = 305 Score = 58.9 bits (141), Expect = 4e-07 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 4/105 (3%) Frame = +2 Query: 35 MEGWLTLPDHLLDLIVER-LSFPDLIRFGCVCKKWRSLCG--PLQFRNHLPWLIVPHQDY 205 M W LP LL LI ++ ++ D + VCK WRS P LPWL++P+Q+ Sbjct: 1 MSRWSDLPPELLQLITQKQTNYVDYLCVRAVCKSWRSALPKKPHDLLCQLPWLLLPYQN- 59 Query: 206 VTSKPGTMAYDSKDV-GFFSLCDRNIYKADIPELTNRRICGSFQG 337 DS + GF++L D Y+ ++PE +R CGS G Sbjct: 60 ----------DSPNHRGFYNLADGKTYRLELPEAYEKRCCGSSHG 94 >ref|XP_002323425.1| predicted protein [Populus trichocarpa] gi|222868055|gb|EEF05186.1| predicted protein [Populus trichocarpa] Length = 344 Score = 55.8 bits (133), Expect = 3e-06 Identities = 35/101 (34%), Positives = 48/101 (47%) Frame = +2 Query: 35 MEGWLTLPDHLLDLIVERLSFPDLIRFGCVCKKWRSLCGPLQFRNHLPWLIVPHQDYVTS 214 M+ W LP LL+LI RLS D IR CK+W + ++ NH PWL+ Sbjct: 1 MQTWSDLPIELLELIFCRLSLEDNIRSSIACKRWNTAAISVRVVNHSPWLM------YFP 54 Query: 215 KPGTMAYDSKDVGFFSLCDRNIYKADIPELTNRRICGSFQG 337 K G M Y+ F+ R Y ++PEL R+C + G Sbjct: 55 KFGNM-YE-----FYDPAQRKTYSLELPELYGSRVCYTKDG 89 >emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera] Length = 530 Score = 55.1 bits (131), Expect = 6e-06 Identities = 42/111 (37%), Positives = 53/111 (47%), Gaps = 12/111 (10%) Frame = +2 Query: 41 GWLTLPDHLLDLIVERL-SFPDLIRFGCVCKKWRSLCG------PLQFRNH-----LPWL 184 GW LPD LL+ I+ L S D IRFG VC W SL P+ R H LPWL Sbjct: 132 GWAWLPDDLLEPILNNLASIVDSIRFGAVCTPWHSLAVKSFQRLPVNQRPHLQPPPLPWL 191 Query: 185 IVPHQDYVTSKPGTMAYDSKDVGFFSLCDRNIYKADIPELTNRRICGSFQG 337 + V SKP + DS+ F+S+ + + K +P R CGS G Sbjct: 192 M------VLSKPNSK--DSR--SFYSITHQKLSKFHLPVPPGTRYCGSSHG 232