BLASTX nr result

ID: Coptis23_contig00031478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031478
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ31757.1| hypothetical protein OsJ_15911 [Oryza sativa Japo...    63   3e-08
gb|EAY95291.1| hypothetical protein OsI_17117 [Oryza sativa Indi...    63   3e-08
ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002323425.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]    55   6e-06

>gb|EAZ31757.1| hypothetical protein OsJ_15911 [Oryza sativa Japonica Group]
          Length = 234

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
 Frame = +2

Query: 41  GWLTLPDHLLDLIVERLS-FPDLIRFGCVCKKWRSLCGPLQFRNHLPWLIVPHQDYVTSK 217
           GW  LPD LLD + +R +   D +R   VCK WRS   P   R+  PWL++P+       
Sbjct: 4   GWAQLPDDLLDNVAQRTAGIKDYVRLRAVCKSWRSFLRP---RSRPPWLMLPYDP----- 55

Query: 218 PGTMAYDSKDVGFFSLCDRNIYKADIPELTNRRICGSFQG 337
                 +S   GF    D  +++ D+P+   +R CGS  G
Sbjct: 56  ----CSESCVRGFLDASDGTVHEIDLPDTRGKRCCGSSHG 91


>gb|EAY95291.1| hypothetical protein OsI_17117 [Oryza sativa Indica Group]
          Length = 334

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
 Frame = +2

Query: 41  GWLTLPDHLLDLIVERLS-FPDLIRFGCVCKKWRSLCGPLQFRNHLPWLIVPHQDYVTSK 217
           GW  LPD LLD + +R +   D +R   VCK WRS   P   R+  PWL++P+       
Sbjct: 4   GWAQLPDDLLDNVAQRTAGIKDYVRLRAVCKSWRSFLRP---RSRPPWLMLPYDP----- 55

Query: 218 PGTMAYDSKDVGFFSLCDRNIYKADIPELTNRRICGSFQG 337
                 +S   GF    D  +++ D+P+   +R CGS  G
Sbjct: 56  ----CSESCVRGFLDASDGTVHEIDLPDTRGKRCCGSSHG 91


>ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|222842402|gb|EEE79949.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
 Frame = +2

Query: 35  MEGWLTLPDHLLDLIVER-LSFPDLIRFGCVCKKWRSLCG--PLQFRNHLPWLIVPHQDY 205
           M  W  LP  LL LI ++  ++ D +    VCK WRS     P      LPWL++P+Q+ 
Sbjct: 1   MSRWSDLPPELLQLITQKQTNYVDYLCVRAVCKSWRSALPKKPHDLLCQLPWLLLPYQN- 59

Query: 206 VTSKPGTMAYDSKDV-GFFSLCDRNIYKADIPELTNRRICGSFQG 337
                     DS +  GF++L D   Y+ ++PE   +R CGS  G
Sbjct: 60  ----------DSPNHRGFYNLADGKTYRLELPEAYEKRCCGSSHG 94


>ref|XP_002323425.1| predicted protein [Populus trichocarpa] gi|222868055|gb|EEF05186.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/101 (34%), Positives = 48/101 (47%)
 Frame = +2

Query: 35  MEGWLTLPDHLLDLIVERLSFPDLIRFGCVCKKWRSLCGPLQFRNHLPWLIVPHQDYVTS 214
           M+ W  LP  LL+LI  RLS  D IR    CK+W +    ++  NH PWL+         
Sbjct: 1   MQTWSDLPIELLELIFCRLSLEDNIRSSIACKRWNTAAISVRVVNHSPWLM------YFP 54

Query: 215 KPGTMAYDSKDVGFFSLCDRNIYKADIPELTNRRICGSFQG 337
           K G M Y+     F+    R  Y  ++PEL   R+C +  G
Sbjct: 55  KFGNM-YE-----FYDPAQRKTYSLELPELYGSRVCYTKDG 89


>emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]
          Length = 530

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 42/111 (37%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
 Frame = +2

Query: 41  GWLTLPDHLLDLIVERL-SFPDLIRFGCVCKKWRSLCG------PLQFRNH-----LPWL 184
           GW  LPD LL+ I+  L S  D IRFG VC  W SL        P+  R H     LPWL
Sbjct: 132 GWAWLPDDLLEPILNNLASIVDSIRFGAVCTPWHSLAVKSFQRLPVNQRPHLQPPPLPWL 191

Query: 185 IVPHQDYVTSKPGTMAYDSKDVGFFSLCDRNIYKADIPELTNRRICGSFQG 337
           +      V SKP +   DS+   F+S+  + + K  +P     R CGS  G
Sbjct: 192 M------VLSKPNSK--DSR--SFYSITHQKLSKFHLPVPPGTRYCGSSHG 232


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