BLASTX nr result

ID: Coptis23_contig00031470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031470
         (995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510736.1| CDK, putative [Ricinus communis] gi|22355143...   261   1e-67
ref|NP_001233905.1| B2-type cyclin dependent kinase [Solanum lyc...   258   1e-66
emb|CBJ18167.1| cyclin dependent kinase B2 [Cucurbita maxima]         257   3e-66
ref|XP_004145561.1| PREDICTED: cyclin-dependent kinase B2-2-like...   257   3e-66
ref|XP_003544998.1| PREDICTED: cyclin-dependent kinase B2-2-like...   256   5e-66

>ref|XP_002510736.1| CDK, putative [Ricinus communis] gi|223551437|gb|EEF52923.1| CDK,
           putative [Ricinus communis]
          Length = 313

 Score =  261 bits (668), Expect = 1e-67
 Identities = 140/288 (48%), Positives = 187/288 (64%), Gaps = 6/288 (2%)
 Frame = -2

Query: 994 GDGASGIVYKMEKKDTGEIFAVKEYYAMEVEKKGVDVSFLREIAILKMLKDCPNIIRLVD 815
           G+G  G VY+  ++ TG+I A+K+    E + +GV  + LREI+IL+ML   P+++RL+D
Sbjct: 22  GEGTYGKVYRARERATGKIVALKKTRLHE-DDEGVPPTTLREISILRMLSRDPHVVRLMD 80

Query: 814 VKNSVNNSGQAIYYLIFEYMEMNLLKYNKF-----HGGDMARVKKLMFQLCNGVAILHGH 650
           VK   N  G+ + YL+FEYM+ +L K+ +          +  VK LM+QLC GVA  HGH
Sbjct: 81  VKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQTGENIPVKSVKSLMYQLCKGVAFCHGH 140

Query: 649 AVLHRDLKPENILINSKDWELKLADFGQSRQFIIPTEAYTLNVCTKPYRAPELLLEFKDY 470
            +LHRDLKP N+L++ K   LK+AD G +R F +P + YT  + T  YRAPE+LL    Y
Sbjct: 141 GILHRDLKPHNLLMDRKTMMLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHY 200

Query: 469 TIATDMWSVGCIFGELVSGDTLFEAHSIEAQFEKIYRLLGTPVDNLWPGTNKXXXXXXXX 290
           + A DMWSVGCIF ELV+   LF   S   Q   I+RLLGTP + LWPG +K        
Sbjct: 201 STAVDMWSVGCIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEKLWPGVSKLVNWHEYP 260

Query: 289 XXAPE-LSSLFPLLDGNGVNLLSQMLQYEPSKRISAKAALEHPYFTDL 149
             +P+ LSS  P LD +G++LL+QMLQYEPSKRISAK A+EHPYF DL
Sbjct: 261 QWSPQSLSSAVPNLDKDGLDLLAQMLQYEPSKRISAKKAMEHPYFDDL 308


>ref|NP_001233905.1| B2-type cyclin dependent kinase [Solanum lycopersicum]
           gi|11125685|emb|CAC15504.1| B2-type cyclin dependent
           kinase [Solanum lycopersicum]
          Length = 315

 Score =  258 bits (660), Expect = 1e-66
 Identities = 139/288 (48%), Positives = 186/288 (64%), Gaps = 6/288 (2%)
 Frame = -2

Query: 994 GDGASGIVYKMEKKDTGEIFAVKEYYAMEVEKKGVDVSFLREIAILKMLKDCPNIIRLVD 815
           G+G  G VY+   + TG+I A+K+    E +++GV  + LREI++L+ML   P+I+RL+D
Sbjct: 24  GEGTYGKVYRARDRITGKIVALKKTRLHE-DEEGVPPTTLREISLLRMLSRDPHIVRLMD 82

Query: 814 VKNSVNNSGQAIYYLIFEYMEMNLLKY-----NKFHGGDMARVKKLMFQLCNGVAILHGH 650
           VK   N  G+ + YL+FEYM+ ++ K+      K     +  VK LM+QLC GVA  HGH
Sbjct: 83  VKQGQNKEGKTVLYLVFEYMDTDVKKFIRTFRAKGETMPLKIVKSLMYQLCKGVAFCHGH 142

Query: 649 AVLHRDLKPENILINSKDWELKLADFGQSRQFIIPTEAYTLNVCTKPYRAPELLLEFKDY 470
            VLHRDLKP N+L++ K   LKLADFG  R + +P + YT  + T  YRAPE+LL    Y
Sbjct: 143 GVLHRDLKPHNLLMDRKTNVLKLADFGLGRAYTLPIKKYTHEILTLWYRAPEVLLGATHY 202

Query: 469 TIATDMWSVGCIFGELVSGDTLFEAHSIEAQFEKIYRLLGTPVDNLWPGTNKXXXXXXXX 290
           + A DMWSVGCIF ELV+   LF   S   Q   I+RLLGTP + LWPG +K        
Sbjct: 203 STAVDMWSVGCIFAELVTNQALFPGDSELQQLLHIFRLLGTPNEELWPGVSKLVNWHEYP 262

Query: 289 XXAPE-LSSLFPLLDGNGVNLLSQMLQYEPSKRISAKAALEHPYFTDL 149
              P+ LS++ P LD +G++LLS+ML YEPS+RISAK A+EHPYF DL
Sbjct: 263 QWKPQPLSTVVPGLDEDGIHLLSEMLHYEPSRRISAKKAMEHPYFDDL 310


>emb|CBJ18167.1| cyclin dependent kinase B2 [Cucurbita maxima]
          Length = 302

 Score =  257 bits (657), Expect = 3e-66
 Identities = 138/288 (47%), Positives = 186/288 (64%), Gaps = 6/288 (2%)
 Frame = -2

Query: 994 GDGASGIVYKMEKKDTGEIFAVKEYYAMEVEKKGVDVSFLREIAILKMLKDCPNIIRLVD 815
           G+G  G VY+  +K TG+I A+K+    E +++GV  + LRE++IL+ML   P+I+RL+D
Sbjct: 11  GEGTYGKVYRAREKATGKIVALKKTRLHE-DEEGVPPTTLREVSILRMLSRDPHIVRLMD 69

Query: 814 VKNSVNNSGQAIYYLIFEYMEMNLLKYNKF--HGGD---MARVKKLMFQLCNGVAILHGH 650
           VK   N  G+ + YL+FEYM+ +L K+ K   H G+   +  VK LM+QLC GVA  HGH
Sbjct: 70  VKQGQNKEGKTVLYLVFEYMDTDLKKFIKSFRHTGESIPVNTVKSLMYQLCKGVAFCHGH 129

Query: 649 AVLHRDLKPENILINSKDWELKLADFGQSRQFIIPTEAYTLNVCTKPYRAPELLLEFKDY 470
            +LHRDLKP N+L++ K   LK+AD G +R F +P + YT  + T  YRAPE+LL    Y
Sbjct: 130 GILHRDLKPHNLLMDRKTMMLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGATHY 189

Query: 469 TIATDMWSVGCIFGELVSGDTLFEAHSIEAQFEKIYRLLGTPVDNLWPGTNKXXXXXXXX 290
           + A DMWSVGCIF EL +   LF       Q   I+RLLGTP + +WPG +K        
Sbjct: 190 STAVDMWSVGCIFAELATKQALFPGDFELQQLLHIFRLLGTPNEKVWPGVSKLMNWPEYP 249

Query: 289 XXAPE-LSSLFPLLDGNGVNLLSQMLQYEPSKRISAKAALEHPYFTDL 149
              P+ LS+  P LD   ++LL+QML+YEPSKRISAK A+EHPYF DL
Sbjct: 250 QWNPQSLSTAVPNLDDKALDLLAQMLKYEPSKRISAKRAMEHPYFDDL 297


>ref|XP_004145561.1| PREDICTED: cyclin-dependent kinase B2-2-like [Cucumis sativus]
           gi|449531219|ref|XP_004172585.1| PREDICTED:
           cyclin-dependent kinase B2-2-like [Cucumis sativus]
          Length = 312

 Score =  257 bits (656), Expect = 3e-66
 Identities = 138/288 (47%), Positives = 186/288 (64%), Gaps = 6/288 (2%)
 Frame = -2

Query: 994 GDGASGIVYKMEKKDTGEIFAVKEYYAMEVEKKGVDVSFLREIAILKMLKDCPNIIRLVD 815
           G+G  G VY+  +K TG+I A+K+    E +++GV  + LRE++IL+ML   P+I+RL+D
Sbjct: 21  GEGTYGKVYRAREKATGKIVALKKTRLHE-DEEGVPPTTLREVSILRMLSRDPHIVRLMD 79

Query: 814 VKNSVNNSGQAIYYLIFEYMEMNLLKYNKF--HGGD---MARVKKLMFQLCNGVAILHGH 650
           VK   N  G+ + YL+FEYM+ +L K+ K   H G+   +  VK LM+QLC GVA  HGH
Sbjct: 80  VKQGQNKEGKTVLYLVFEYMDTDLKKFIKSFRHTGENIPVNTVKSLMYQLCKGVAFCHGH 139

Query: 649 AVLHRDLKPENILINSKDWELKLADFGQSRQFIIPTEAYTLNVCTKPYRAPELLLEFKDY 470
            +LHRDLKP N+L++ K   LK+AD G +R F +P + YT  + T  YRAPE+LL    Y
Sbjct: 140 GILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHY 199

Query: 469 TIATDMWSVGCIFGELVSGDTLFEAHSIEAQFEKIYRLLGTPVDNLWPGTNKXXXXXXXX 290
           + A DMWSV CIF EL +   LF   S   Q   I+RLLGTP + +WPG +K        
Sbjct: 200 STAVDMWSVACIFAELATKQPLFPGDSELQQLLHIFRLLGTPNEKVWPGVSKLMNWHEYP 259

Query: 289 XXAPE-LSSLFPLLDGNGVNLLSQMLQYEPSKRISAKAALEHPYFTDL 149
              P+ LS+  P LD  G++LLS+ML+YEPS RISAK A+EHPYF DL
Sbjct: 260 QWNPQSLSTAVPNLDDKGLDLLSKMLKYEPSMRISAKKAMEHPYFDDL 307


>ref|XP_003544998.1| PREDICTED: cyclin-dependent kinase B2-2-like [Glycine max]
          Length = 311

 Score =  256 bits (655), Expect = 5e-66
 Identities = 137/288 (47%), Positives = 188/288 (65%), Gaps = 6/288 (2%)
 Frame = -2

Query: 994 GDGASGIVYKMEKKDTGEIFAVKEYYAMEVEKKGVDVSFLREIAILKMLKDCPNIIRLVD 815
           G+G  G VY+  +K TG+I A+K+    E +++GV  + LRE++IL+ML   P+++RL+D
Sbjct: 20  GEGTYGKVYRAREKATGKIVALKKTRLHE-DEEGVPPTTLREVSILRMLSRDPHVVRLMD 78

Query: 814 VKNSVNNSGQAIYYLIFEYMEMNLLKYNKF--HGGDMAR---VKKLMFQLCNGVAILHGH 650
           VK   N  G+ + YL+FEYM+ +L K+ +     G+      +K LM+QLC GVA  HGH
Sbjct: 79  VKQGQNKEGKTVLYLVFEYMDTDLKKFIRSFRQSGETIPPHIIKSLMYQLCKGVAFCHGH 138

Query: 649 AVLHRDLKPENILINSKDWELKLADFGQSRQFIIPTEAYTLNVCTKPYRAPELLLEFKDY 470
            +LHRDLKP N+L++ K   LK+AD G +R F +P + YT  + T  YRAPE+LL    Y
Sbjct: 139 GILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHY 198

Query: 469 TIATDMWSVGCIFGELVSGDTLFEAHSIEAQFEKIYRLLGTPVDNLWPGTNKXXXXXXXX 290
           ++A DMWSVGCIF ELV+   LF   S   Q   I+RLLGTP +++WPG +K        
Sbjct: 199 SMAVDMWSVGCIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEDVWPGVSKLMNWHEYP 258

Query: 289 XXAPE-LSSLFPLLDGNGVNLLSQMLQYEPSKRISAKAALEHPYFTDL 149
              P+ LS+  P LD  G++LLSQML+YEPSKRISAK A+EH YF DL
Sbjct: 259 QWNPQSLSTAVPSLDELGLDLLSQMLKYEPSKRISAKKAMEHVYFDDL 306


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