BLASTX nr result

ID: Coptis23_contig00031433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031433
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001190024.1| Glycosyl hydrolase family protein [Arabidops...    88   6e-16
ref|NP_190288.1| Glycosyl hydrolase family protein [Arabidopsis ...    88   6e-16
ref|XP_002877538.1| glycosyl hydrolase family 3 protein [Arabido...    87   1e-15
ref|XP_002877537.1| hydrolase, hydrolyzing O-glycosyl compounds ...    87   1e-15
emb|CBI16000.3| unnamed protein product [Vitis vinifera]               86   2e-15

>ref|NP_001190024.1| Glycosyl hydrolase family protein [Arabidopsis thaliana]
           gi|332644715|gb|AEE78236.1| Glycosyl hydrolase family
           protein [Arabidopsis thaliana]
          Length = 644

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 38/49 (77%), Positives = 43/49 (87%)
 Frame = -2

Query: 338 ITDVVFGDYDFEGLLPVTWFKRVDQLPMNAGDQSYDPLFPLGFGLRFNS 192
           +TDV+FGDYDFEG LPV+WFKRVDQLP+ A   SYDPLFPLGFGL +NS
Sbjct: 592 MTDVIFGDYDFEGKLPVSWFKRVDQLPLTADANSYDPLFPLGFGLNYNS 640


>ref|NP_190288.1| Glycosyl hydrolase family protein [Arabidopsis thaliana]
           gi|6522585|emb|CAB61950.1| beta-D-glucan
           exohydrolase-like protein [Arabidopsis thaliana]
           gi|332644714|gb|AEE78235.1| Glycosyl hydrolase family
           protein [Arabidopsis thaliana]
          Length = 636

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 38/49 (77%), Positives = 43/49 (87%)
 Frame = -2

Query: 338 ITDVVFGDYDFEGLLPVTWFKRVDQLPMNAGDQSYDPLFPLGFGLRFNS 192
           +TDV+FGDYDFEG LPV+WFKRVDQLP+ A   SYDPLFPLGFGL +NS
Sbjct: 584 MTDVIFGDYDFEGKLPVSWFKRVDQLPLTADANSYDPLFPLGFGLNYNS 632


>ref|XP_002877538.1| glycosyl hydrolase family 3 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297323376|gb|EFH53797.1| glycosyl hydrolase
           family 3 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 596

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 38/50 (76%), Positives = 43/50 (86%)
 Frame = -2

Query: 338 ITDVVFGDYDFEGLLPVTWFKRVDQLPMNAGDQSYDPLFPLGFGLRFNSG 189
           I+ V+FGDYDFEG LPV+WFKRVDQLP+ A   SYDPLFPLGFGL +NSG
Sbjct: 536 ISGVIFGDYDFEGKLPVSWFKRVDQLPLTADANSYDPLFPLGFGLNYNSG 585


>ref|XP_002877537.1| hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis lyrata
           subsp. lyrata] gi|297323375|gb|EFH53796.1| hydrolase,
           hydrolyzing O-glycosyl compounds [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 38/50 (76%), Positives = 44/50 (88%)
 Frame = -2

Query: 338 ITDVVFGDYDFEGLLPVTWFKRVDQLPMNAGDQSYDPLFPLGFGLRFNSG 189
           ITDV+FG+YDF+G LPV+WFKRVDQLP+NA   SYDPLFP+GFGL  NSG
Sbjct: 557 ITDVIFGNYDFKGKLPVSWFKRVDQLPLNADADSYDPLFPIGFGLTSNSG 606


>emb|CBI16000.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 38/48 (79%), Positives = 41/48 (85%)
 Frame = -2

Query: 338 ITDVVFGDYDFEGLLPVTWFKRVDQLPMNAGDQSYDPLFPLGFGLRFN 195
           ITDVVFGDYDFEG LPVTWFK V+QLPM+  D SYDPLFP GFGL +N
Sbjct: 533 ITDVVFGDYDFEGRLPVTWFKSVEQLPMHPEDNSYDPLFPFGFGLTYN 580


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