BLASTX nr result

ID: Coptis23_contig00031419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031419
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFX72858.1| MADS-box protein AGL65, partial [Aquilegia coerulea]    67   2e-11
ref|XP_002281961.2| PREDICTED: myocyte-specific enhancer factor ...    65   5e-11
emb|CAX16990.1| MADS1 protein [Eschscholzia californica] gi|3431...    65   1e-10
ref|XP_002311308.1| predicted protein [Populus trichocarpa] gi|2...    65   2e-10
emb|CAY39417.1| MADS1 protein [Aristolochia fimbriata] gi|343160...    65   2e-10

>gb|AFX72858.1| MADS-box protein AGL65, partial [Aquilegia coerulea]
          Length = 212

 Score = 67.0 bits (162), Expect(2) = 2e-11
 Identities = 32/44 (72%), Positives = 38/44 (86%)
 Frame = -3

Query: 133 KGKKEVGKPQALKKTFKKLDHDVNI*DFLGTSTQTVEDLTNQSR 2
           + K+++   +ALKKTFKKLDHDVNI +FLG STQTVEDLTNQSR
Sbjct: 79  RAKRKLESLEALKKTFKKLDHDVNIQEFLGNSTQTVEDLTNQSR 122



 Score = 26.6 bits (57), Expect(2) = 2e-11
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = -1

Query: 171 EIIAKFAQLNPQE 133
           E+IAKFAQL PQE
Sbjct: 66  EVIAKFAQLTPQE 78


>ref|XP_002281961.2| PREDICTED: myocyte-specific enhancer factor 2A homolog [Vitis
           vinifera] gi|297733964|emb|CBI15211.3| unnamed protein
           product [Vitis vinifera]
          Length = 375

 Score = 64.7 bits (156), Expect(2) = 5e-11
 Identities = 29/44 (65%), Positives = 38/44 (86%)
 Frame = -3

Query: 133 KGKKEVGKPQALKKTFKKLDHDVNI*DFLGTSTQTVEDLTNQSR 2
           + K+++   +ALKKTFKKLDHDVN+ DFLG STQT+E+LTNQ+R
Sbjct: 79  RAKRKLESLEALKKTFKKLDHDVNLQDFLGASTQTIEELTNQAR 122



 Score = 27.3 bits (59), Expect(2) = 5e-11
 Identities = 16/26 (61%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -1

Query: 207 RRLLFWRQMSSIE-IIAKFAQLNPQE 133
           R  LF    S IE +IAKFAQL PQE
Sbjct: 53  RPTLFHGARSDIEEVIAKFAQLTPQE 78


>emb|CAX16990.1| MADS1 protein [Eschscholzia californica]
           gi|343160543|emb|CAX16991.1| MADS1 protein [Eschscholzia
           californica]
          Length = 361

 Score = 65.5 bits (158), Expect(2) = 1e-10
 Identities = 31/42 (73%), Positives = 37/42 (88%)
 Frame = -3

Query: 133 KGKKEVGKPQALKKTFKKLDHDVNI*DFLGTSTQTVEDLTNQ 8
           + K+++   +ALKKTFKKL+HDVNI DFLGTSTQTVEDLTNQ
Sbjct: 79  RAKRKLESLEALKKTFKKLEHDVNIQDFLGTSTQTVEDLTNQ 120



 Score = 25.4 bits (54), Expect(2) = 1e-10
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -1

Query: 171 EIIAKFAQLNPQE 133
           ++IAKFAQL PQE
Sbjct: 66  DVIAKFAQLTPQE 78


>ref|XP_002311308.1| predicted protein [Populus trichocarpa] gi|222851128|gb|EEE88675.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 65.1 bits (157), Expect(2) = 2e-10
 Identities = 30/44 (68%), Positives = 39/44 (88%)
 Frame = -3

Query: 133 KGKKEVGKPQALKKTFKKLDHDVNI*DFLGTSTQTVEDLTNQSR 2
           + K+++   +ALKKTFKKLDHDVNI +FLGTS+QT+EDLT+QSR
Sbjct: 79  RAKRKLESLEALKKTFKKLDHDVNIPEFLGTSSQTIEDLTSQSR 122



 Score = 25.0 bits (53), Expect(2) = 2e-10
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -1

Query: 171 EIIAKFAQLNPQE 133
           E+I KFAQL PQE
Sbjct: 66  EVITKFAQLTPQE 78


>emb|CAY39417.1| MADS1 protein [Aristolochia fimbriata] gi|343160579|emb|CAY39418.1|
           MADS1 protein [Aristolochia fimbriata]
          Length = 349

 Score = 65.5 bits (158), Expect(2) = 2e-10
 Identities = 30/44 (68%), Positives = 37/44 (84%)
 Frame = -3

Query: 133 KGKKEVGKPQALKKTFKKLDHDVNI*DFLGTSTQTVEDLTNQSR 2
           + K+++   + LKKTFKKLDHDVN+ DFLGT TQTVE+LTNQSR
Sbjct: 81  RAKRKLESLETLKKTFKKLDHDVNVQDFLGTGTQTVEELTNQSR 124



 Score = 24.6 bits (52), Expect(2) = 2e-10
 Identities = 12/20 (60%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
 Frame = -1

Query: 189 RQMSSIE-IIAKFAQLNPQE 133
           R  S+IE +I++FAQL PQE
Sbjct: 61  RSSSNIEDVISRFAQLTPQE 80


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