BLASTX nr result

ID: Coptis23_contig00031418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031418
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236413.1| uncharacterized protein LOC100526951 precurs...   107   1e-21
ref|NP_001239759.1| uncharacterized protein LOC100782360 precurs...   100   1e-19
ref|XP_002307862.1| predicted protein [Populus trichocarpa] gi|2...    85   9e-15
emb|CAN62855.1| hypothetical protein VITISV_011346 [Vitis vinifera]    78   1e-12
ref|XP_002510146.1| conserved hypothetical protein [Ricinus comm...    74   2e-11

>ref|NP_001236413.1| uncharacterized protein LOC100526951 precursor [Glycine max]
           gi|255631234|gb|ACU15984.1| unknown [Glycine max]
          Length = 135

 Score =  107 bits (268), Expect = 1e-21
 Identities = 55/96 (57%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
 Frame = +3

Query: 6   GGGGHQFTNAQTLGGIKDSGPSAGGGGHKFTDANTLGGIKVSGPSPRGKGHDYANVQSLG 185
           GG    F +   LG +KDSGPS G G HKFT++ TLGGIK SGPSP GKGH + N ++LG
Sbjct: 41  GGEEVDFFDWLALGAMKDSGPSPGVG-HKFTNSETLGGIKDSGPSPGGKGHQFTNSETLG 99

Query: 186 GIKGS-INRSGDGHSLIDIQIFGGIKDSGPSPGQGH 290
           GIK S ++  G+GH   + +  G IKDSGPSPGQGH
Sbjct: 100 GIKNSGLSVGGEGHKFTNSETLGEIKDSGPSPGQGH 135


>ref|NP_001239759.1| uncharacterized protein LOC100782360 precursor [Glycine max]
           gi|255640582|gb|ACU20576.1| unknown [Glycine max]
          Length = 132

 Score =  100 bits (250), Expect = 1e-19
 Identities = 53/96 (55%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
 Frame = +3

Query: 6   GGGGHQFTNAQTLGGIKDSGPSAGGGGHKFTDANTLGGIKVSGPSPRGKGHDYANVQSLG 185
           GG    F +  +LG +KDSGPS G G HKFT++ TLGGIK SGPS  G GH + N Q+LG
Sbjct: 38  GGEVVDFFDWLSLGAMKDSGPSPGVG-HKFTNSETLGGIKDSGPSSGGPGHQFTNSQTLG 96

Query: 186 GIKGS-INRSGDGHSLIDIQIFGGIKDSGPSPGQGH 290
           GIK S  +  G+GH   + +  G +KDSGPSPGQGH
Sbjct: 97  GIKNSGPSPGGEGHKFTNSETLGEMKDSGPSPGQGH 132



 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 38/52 (73%), Positives = 45/52 (86%)
 Frame = +3

Query: 3   AGGGGHQFTNAQTLGGIKDSGPSAGGGGHKFTDANTLGGIKVSGPSPRGKGH 158
           +GG GHQFTN+QTLGGIK+SGPS GG GHKFT++ TLG +K SGPSP G+GH
Sbjct: 82  SGGPGHQFTNSQTLGGIKNSGPSPGGEGHKFTNSETLGEMKDSGPSP-GQGH 132



 Score = 68.2 bits (165), Expect = 9e-10
 Identities = 41/92 (44%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
 Frame = +3

Query: 27  TNAQTLGGIKDSGPSAGGGGHKFTDANTLGGIKVSGPSPRGKGHDYANVQSLGGIKGS-I 203
           + A+ L  I+      GG    F D  +LG +K SGPSP G GH + N ++LGGIK S  
Sbjct: 22  SEARPLSIIETEKSVTGGEVVDFFDWLSLGAMKDSGPSP-GVGHKFTNSETLGGIKDSGP 80

Query: 204 NRSGDGHSLIDIQIFGGIKDSGPSP-GQGHNY 296
           +  G GH   + Q  GGIK+SGPSP G+GH +
Sbjct: 81  SSGGPGHQFTNSQTLGGIKNSGPSPGGEGHKF 112


>ref|XP_002307862.1| predicted protein [Populus trichocarpa] gi|222853838|gb|EEE91385.1|
           predicted protein [Populus trichocarpa]
          Length = 369

 Score = 84.7 bits (208), Expect = 9e-15
 Identities = 48/90 (53%), Positives = 56/90 (62%)
 Frame = +3

Query: 9   GGGHQFTNAQTLGGIKDSGPSAGGGGHKFTDANTLGGIKVSGPSPRGKGHDYANVQSLGG 188
           G GH+FTN+ TLGGIK+ GPS    GH FT + TLGGIK  GPSP G GH + N  +LGG
Sbjct: 64  GAGHEFTNSGTLGGIKEEGPSP-SAGHGFTSSGTLGGIK-EGPSP-GAGHGFTNSGTLGG 120

Query: 189 IKGSINRSGDGHSLIDIQIFGGIKDSGPSP 278
           IK   +  G GH   +     GIK  GPSP
Sbjct: 121 IKEGPS-PGVGHGFTNSGTLEGIKKEGPSP 149



 Score = 84.7 bits (208), Expect = 9e-15
 Identities = 52/110 (47%), Positives = 63/110 (57%), Gaps = 14/110 (12%)
 Frame = +3

Query: 9   GGGHQFTNAQTLGGIKDSGPSAGGGGHKFTDANTLGGIKVSGPSPR-------------- 146
           G GH FTN+ TLGGIK+ GPS G G H FT++ TL GIK  GPSP               
Sbjct: 107 GAGHGFTNSGTLGGIKE-GPSPGVG-HGFTNSGTLEGIKKEGPSPTNSGTLGGIKEGPSP 164

Query: 147 GKGHDYANVQSLGGIKGSINRSGDGHSLIDIQIFGGIKDSGPSPGQGHNY 296
           G GH + N ++LGGIK   +  G GH   +    GGIK+ GPSPG GH +
Sbjct: 165 GAGHGFTNSETLGGIKEGPS-PGVGHEFTNSGTLGGIKE-GPSPGVGHGF 212



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 54/118 (45%), Positives = 66/118 (55%), Gaps = 22/118 (18%)
 Frame = +3

Query: 9   GGGHQFTNAQTLGGIKDSGPSAGGGGHKFTDANTLGGIKVSGPSPR-------------- 146
           G GH+FTN+ TLGGIK+ GPS G G H FT++ TL GIK  GPSP               
Sbjct: 186 GVGHEFTNSGTLGGIKE-GPSPGVG-HGFTNSGTLEGIKKEGPSPTNSGTLGGIKEGPSP 243

Query: 147 GKGHDYANVQSLGGIK-----GSINRS---GDGHSLIDIQIFGGIKDSGPSPGQGHNY 296
           G GH + N ++LGGIK     G I      G GH+  +    GGIK+ GPSPG GH +
Sbjct: 244 GAGHGFTNSETLGGIKEGPSPGGIKEGSSPGVGHAFTNSGTLGGIKE-GPSPGAGHAF 300



 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 46/99 (46%), Positives = 53/99 (53%)
 Frame = +3

Query: 9   GGGHQFTNAQTLGGIKDSGPSAGGGGHKFTDANTLGGIKVSGPSPRGKGHDYANVQSLGG 188
           G GH FTN+ TLGGIK+ GPS  G GH FT++ TLGGIK  G SP G GH + N  +LGG
Sbjct: 295 GAGHAFTNSGTLGGIKE-GPSP-GAGHGFTNSGTLGGIK-EGSSP-GVGHGFTNSGTLGG 350

Query: 189 IKGSINRSGDGHSLIDIQIFGGIKDSGPSPGQGHNYITG 305
           IK                        GPSP  G+ Y TG
Sbjct: 351 IK-----------------------EGPSPCCGNKYTTG 366



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/90 (42%), Positives = 47/90 (52%)
 Frame = +3

Query: 27  TNAQTLGGIKDSGPSAGGGGHKFTDANTLGGIKVSGPSPRGKGHDYANVQSLGGIKGSIN 206
           T A+    +K    +A  G   F D  +LGGIK  GPSP G GH++ N  +LGGIK    
Sbjct: 26  TEARPFNIMKSGNSAASRGTESFFDGLSLGGIK-EGPSP-GAGHEFTNSGTLGGIKEEGP 83

Query: 207 RSGDGHSLIDIQIFGGIKDSGPSPGQGHNY 296
               GH        GGIK+ GPSPG GH +
Sbjct: 84  SPSAGHGFTSSGTLGGIKE-GPSPGAGHGF 112


>emb|CAN62855.1| hypothetical protein VITISV_011346 [Vitis vinifera]
          Length = 231

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 41/71 (57%), Positives = 48/71 (67%)
 Frame = +3

Query: 24  FTNAQTLGGIKDSGPSAGGGGHKFTDANTLGGIKVSGPSPRGKGHDYANVQSLGGIKGSI 203
           F +  +LG IK SGPS G G HKFT+A TLGGIK SGPSP G GH + N  +LGGIK S 
Sbjct: 44  FFDGLSLGAIKQSGPSPGNG-HKFTNAGTLGGIKDSGPSP-GNGHKFTNAGTLGGIKDSG 101

Query: 204 NRSGDGHSLID 236
              G+GH  +D
Sbjct: 102 PNPGEGHKELD 112



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/68 (58%), Positives = 48/68 (70%)
 Frame = +3

Query: 9   GGGHQFTNAQTLGGIKDSGPSAGGGGHKFTDANTLGGIKVSGPSPRGKGHDYANVQSLGG 188
           G GH+FTNA TLGGIKDSGPS  G GHKFT+A TLGGIK SGP+P G+GH   + + +  
Sbjct: 61  GNGHKFTNAGTLGGIKDSGPSP-GNGHKFTNAGTLGGIKDSGPNP-GEGHKELDDEWVSS 118

Query: 189 IKGSINRS 212
               I +S
Sbjct: 119 FAKKIRKS 126



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 40/79 (50%), Positives = 47/79 (59%)
 Frame = +3

Query: 54  KDSGPSAGGGGHKFTDANTLGGIKVSGPSPRGKGHDYANVQSLGGIKGSINRSGDGHSLI 233
           K  GP  G     F D  +LG IK SGPSP G GH + N  +LGGIK S    G+GH   
Sbjct: 32  KPRGPD-GEEMRGFFDGLSLGAIKQSGPSP-GNGHKFTNAGTLGGIKDSGPSPGNGHKFT 89

Query: 234 DIQIFGGIKDSGPSPGQGH 290
           +    GGIKDSGP+PG+GH
Sbjct: 90  NAGTLGGIKDSGPNPGEGH 108


>ref|XP_002510146.1| conserved hypothetical protein [Ricinus communis]
           gi|223550847|gb|EEF52333.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 152

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 46/98 (46%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = +3

Query: 6   GGGGHQFTNAQTLGGIKDSGPSAGGGGHKFTDA-NTLGGIKVSGPSPRGKGHDYANVQS- 179
           GG GH++ NAQT GGIK SGP+ G G +  T    TLGGIK SGPS  G+G+ +      
Sbjct: 50  GGRGHKYINAQTTGGIKHSGPAPGVGNYYTTKTPQTLGGIKHSGPSHGGEGNHHTTSTPR 109

Query: 180 --LGGIK---GSINRSGDGHSLIDIQIFGGIKDSGPSP 278
             LGGIK    S    G+ ++    Q  GG+K SGPSP
Sbjct: 110 VFLGGIKHSGPSHGGQGNYYTTSAPQTLGGLKHSGPSP 147



 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 47/93 (50%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
 Frame = +3

Query: 51  IKDSGPSAGGGGHKFTDANTLGGIKVSGPSPRGKGHDYA--NVQSLGGIKGS-INRSGDG 221
           I   GPS GG GHK+ +A T GGIK SGP+P G G+ Y     Q+LGGIK S  +  G+G
Sbjct: 42  ITSEGPSPGGRGHKYINAQTTGGIKHSGPAP-GVGNYYTTKTPQTLGGIKHSGPSHGGEG 100

Query: 222 --HSLIDIQIF-GGIKDSGPS-PGQGHNYITGA 308
             H+    ++F GGIK SGPS  GQG+ Y T A
Sbjct: 101 NHHTTSTPRVFLGGIKHSGPSHGGQGNYYTTSA 133


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