BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031404
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21840.3| unnamed protein product [Vitis vinifera]               65   7e-09
ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]    65   7e-09
ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08
ref|XP_003526072.1| PREDICTED: pentatricopeptide repeat-containi...    57   1e-06

>emb|CBI21840.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
 Frame = -3

Query: 234 FRIPNLLIAAYCKNGLLEKAEKLINLIIEKGKNPLPSSLDFLVTDYVKAN*FPKAMKLWN 55
           FR+PNLLI AYCK GLLEKAE+L++  IE+G+ P+  + D L   Y + N   KA+    
Sbjct: 293 FRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLK 352

Query: 54  PAIRSS---LVPY*DTLSACL 1
            A+ ++     P   TLSACL
Sbjct: 353 KALLATSQGWKPNPVTLSACL 373


>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
 Frame = -3

Query: 234 FRIPNLLIAAYCKNGLLEKAEKLINLIIEKGKNPLPSSLDFLVTDYVKAN*FPKAMKLWN 55
           FR+PNLLI AYCK GLLEKAE+L++  IE+G+ P+  + D L   Y + N   KA+    
Sbjct: 346 FRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLK 405

Query: 54  PAIRSS---LVPY*DTLSACL 1
            A+ ++     P   TLSACL
Sbjct: 406 KALLATSQGWKPNPVTLSACL 426


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
 Frame = -3

Query: 234 FRIPNLLIAAYCKNGLLEKAEKLINLIIEKGKNPLPSSLDFLVTDYVKAN*FPKAMKLWN 55
           FR+PNLLI AYCK GLLEKAE+L++  IE+G+ P+  + D L   Y + N   KA+    
Sbjct: 346 FRVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLK 405

Query: 54  PAIRSS---LVPY*DTLSACL 1
            A+ ++     P   TLSACL
Sbjct: 406 KALLATSQGWKPNPVTLSACL 426


>ref|XP_002262853.2| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
 Frame = -3

Query: 234 FRIPNLLIAAYCKNGLLEKAEKLINLIIEKGKNPLPSSLDFLVTDYVKAN*FPKAMKLWN 55
           FR+PN LI AYC+ GL EKAE L+N I+ KG NPL  +  +L   Y++ +  PKA++   
Sbjct: 360 FRVPNFLIDAYCRKGLTEKAEALVNKILTKGGNPLVDTWFYLANGYLEDSQIPKAVEALK 419

Query: 54  PAI---RSSLVPY*DTLSACL 1
            A+     +  P  +TL+ CL
Sbjct: 420 KAVVVCPPNWKPSKNTLATCL 440


>ref|XP_003526072.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial-like [Glycine max]
          Length = 492

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/63 (38%), Positives = 39/63 (61%)
 Frame = -3

Query: 234 FRIPNLLIAAYCKNGLLEKAEKLINLIIEKGKNPLPSSLDFLVTDYVKAN*FPKAMKLWN 55
           FR+PN+L+  YC+ GL+EKAE L+  ++ +GK P+P+S   + + YV      KA +   
Sbjct: 342 FRVPNILLIGYCQRGLVEKAEALLRKMVAEGKTPIPNSWSIVASGYVAKENMEKAFQCMK 401

Query: 54  PAI 46
            A+
Sbjct: 402 EAV 404