BLASTX nr result
ID: Coptis23_contig00031392
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00031392 (427 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002309611.1| predicted protein [Populus trichocarpa] gi|2... 82 6e-14 ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|2235454... 72 4e-11 ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261... 70 2e-10 emb|CBI21012.3| unnamed protein product [Vitis vinifera] 57 2e-06 ref|XP_002324848.1| predicted protein [Populus trichocarpa] gi|2... 55 8e-06 >ref|XP_002309611.1| predicted protein [Populus trichocarpa] gi|222855587|gb|EEE93134.1| predicted protein [Populus trichocarpa] Length = 847 Score = 81.6 bits (200), Expect = 6e-14 Identities = 59/146 (40%), Positives = 80/146 (54%), Gaps = 5/146 (3%) Frame = +3 Query: 3 LPSPESDTRSPGNLKPHSTRSTTGEGRLDIGFGQEFEYSVTGRLN-FSPRWDGLEDIYNL 179 LPS SP N + + T + GQE +Y++T FSP++D L D + Sbjct: 635 LPSYAKSVSSPSNSQGNDMLPKTSITLDIVSHGQELDYNITEITGQFSPQFDELADFSDH 694 Query: 180 TPLAQPPMNSTDISSPSHSRECAKVSQVQLQ-GSVRLSG--SLCWRTSPITPRPQLSGSK 350 TPL P S+ S +++ A VSQ ++ GS RLS SL W +SPITP +L +K Sbjct: 695 TPLPNPSSIMMASSASSKTQDKANVSQPRVYPGSARLSSGSSLHWYSSPITPMTRLGETK 754 Query: 351 LCHESDSDIG-YEILEDDTPDILKDT 425 DSD G Y+ILEDDTP+ILKD+ Sbjct: 755 N-QAQDSDCGLYDILEDDTPEILKDS 779 >ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|223545491|gb|EEF46996.1| tso1, putative [Ricinus communis] Length = 873 Score = 72.4 bits (176), Expect = 4e-11 Identities = 61/155 (39%), Positives = 86/155 (55%), Gaps = 15/155 (9%) Frame = +3 Query: 3 LPSPESDTRS-PGNLKPHSTRST--------TGEGRLDI-GFGQEFEYSVTGRLN-FSPR 149 +PSPESD P N K STRS+ + +DI Q +Y+V+ ++ FS + Sbjct: 653 VPSPESDISILPSNAK--STRSSRYCDTIPEASKETVDIDSCDQGIDYNVSEMMSQFSSK 710 Query: 150 WDGLEDIYNLTPLAQPPMNSTDISSPSHSRECAKVSQVQL-QGSVRLSG--SLCWRTSPI 320 L DIY+ PL P + S+ S +R+ + S+ QL GS RL S+ W SPI Sbjct: 711 CSALADIYDPNPLTNPMTVTLGSSASSKTRDWSSGSRFQLCPGSGRLPSGRSVRWWNSPI 770 Query: 321 TPRPQLSGSKLC-HESDSDIGYEILEDDTPDILKD 422 TP +L +K+ H+SDS + Y ILEDDTP+ILK+ Sbjct: 771 TPMTRLGENKIQGHDSDSGL-YNILEDDTPEILKE 804 >ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261127 [Vitis vinifera] Length = 1001 Score = 69.7 bits (169), Expect = 2e-10 Identities = 59/156 (37%), Positives = 81/156 (51%), Gaps = 18/156 (11%) Frame = +3 Query: 9 SPESDTR----------SPGNLKPHSTRSTTGEGRLDIG-FGQEFEYSVTGRLN-FSPRW 152 SPESD SP N H+ G+ D+ + EFEY +++ F+P Sbjct: 769 SPESDFSILSSYGKSPVSPKNSDSHNILPEPGKEIWDMACYEHEFEYGNAEKVDQFTPGC 828 Query: 153 DGLEDIYNLTPLAQP-PMNSTDISSPSHSRECAKVSQVQL-QGSVRL--SGSLCWRTSPI 320 D L D+ + T L P + + S+ S + VS+ QL GS L GSL WR+SPI Sbjct: 829 DRLSDVCHFTSLPSSLPTTAMNPSASSKTSGLTNVSRGQLCPGSDHLVSGGSLRWRSSPI 888 Query: 321 TPRPQLSGSKLCH--ESDSDIGYEILEDDTPDILKD 422 P QL +K+ ESD+++ Y+ILEDDTP ILKD Sbjct: 889 PPSTQLGETKIFQGLESDNEL-YDILEDDTPTILKD 923 >emb|CBI21012.3| unnamed protein product [Vitis vinifera] Length = 1094 Score = 56.6 bits (135), Expect = 2e-06 Identities = 55/154 (35%), Positives = 71/154 (46%), Gaps = 16/154 (10%) Frame = +3 Query: 9 SPESDTR----------SPGNLKPHSTRSTTGEGRLDIG-FGQEFEYSVTGRLNFSPRWD 155 SPESD SP N H+ G+ D+ + EFEY Sbjct: 776 SPESDFSILSSYGKSPVSPKNSDSHNILPEPGKEIWDMACYEHEFEYG------------ 823 Query: 156 GLEDIYNLTPLAQPPMNSTDISSPSHSRECAKVSQVQL-QGSVRL--SGSLCWRTSPITP 326 E + TP + P S+ S + VS+ QL GS L GSL WR+SPI P Sbjct: 824 NAEKVDQFTPGSMNP------SASSKTSGLTNVSRGQLCPGSDHLVSGGSLRWRSSPIPP 877 Query: 327 RPQLSGSKLCH--ESDSDIGYEILEDDTPDILKD 422 QL +K+ ESD+++ Y+ILEDDTP ILKD Sbjct: 878 STQLGETKIFQGLESDNEL-YDILEDDTPTILKD 910 >ref|XP_002324848.1| predicted protein [Populus trichocarpa] gi|222866282|gb|EEF03413.1| predicted protein [Populus trichocarpa] Length = 140 Score = 54.7 bits (130), Expect = 8e-06 Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 4/73 (5%) Frame = +3 Query: 219 SSPSHSRECAKVSQVQLQ-GSVRLS--GSLCWRTSPITPRPQLSGSKLCHESDSDIG-YE 386 SS S +R+ A +SQV L GS RLS GSL WR+SPITP +L +K DS G Y+ Sbjct: 3 SSSSKTRDTAIISQVCLYPGSGRLSSSGSLQWRSSPITPMTRLGETK-TQALDSGCGLYD 61 Query: 387 ILEDDTPDILKDT 425 ILED TP+I K++ Sbjct: 62 ILEDGTPEIFKES 74