BLASTX nr result

ID: Coptis23_contig00031369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031369
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278969.2| PREDICTED: guanine nucleotide-binding protei...   213   1e-53
ref|XP_002522320.1| conserved hypothetical protein [Ricinus comm...   201   5e-50
ref|XP_003527666.1| PREDICTED: ASTRA-associated protein 1-like [...   200   9e-50
ref|XP_003603736.1| Guanine nucleotide-binding protein subunit b...   196   2e-48
gb|ADX87418.1| decreased size exclusion limit 1 [Nicotiana benth...   192   2e-47

>ref|XP_002278969.2| PREDICTED: guanine nucleotide-binding protein subunit beta-like
           protein 1 homolog [Vitis vinifera]
           gi|302142603|emb|CBI19806.3| unnamed protein product
           [Vitis vinifera]
          Length = 382

 Score =  213 bits (543), Expect = 1e-53
 Identities = 96/134 (71%), Positives = 118/134 (88%)
 Frame = +2

Query: 2   LPLSCNGSSLDHGTKARGMCMAVQAFVPSESQGFLNVLAGYEDGTMVWWDIRNPGVPLAA 181
           LP  C G S ++ TK+RGMCMAVQAF+PSESQGFLN+L+GYEDGTMVWWDIRNPG+P+ +
Sbjct: 198 LPQKCLGGSSNYCTKSRGMCMAVQAFLPSESQGFLNILSGYEDGTMVWWDIRNPGIPITS 257

Query: 182 VKFHSEPVLSITVDGLCAGGISGAADHKLVFYTLNHQMGSCMVKREHGLEQPGIAGTSIR 361
           VKFH EP+LSI +DG C+GGISGAAD+K+V + L++ MGSC+VK+E  LE+PGI+GTS+R
Sbjct: 258 VKFHLEPILSICLDGSCSGGISGAADNKIVIFGLDNPMGSCVVKKEISLERPGISGTSVR 317

Query: 362 LDGKIAATAGWDHR 403
            DGKIAATAGWDHR
Sbjct: 318 SDGKIAATAGWDHR 331


>ref|XP_002522320.1| conserved hypothetical protein [Ricinus communis]
           gi|223538398|gb|EEF40004.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 441

 Score =  201 bits (511), Expect = 5e-50
 Identities = 91/134 (67%), Positives = 115/134 (85%)
 Frame = +2

Query: 2   LPLSCNGSSLDHGTKARGMCMAVQAFVPSESQGFLNVLAGYEDGTMVWWDIRNPGVPLAA 181
           L  +C+G S    T+ RGMCMAVQAF+PSESQGFLN+LAGYEDG+M+WWD+R+PGVPL +
Sbjct: 203 LAQNCSGGSSSITTQKRGMCMAVQAFLPSESQGFLNLLAGYEDGSMLWWDMRSPGVPLTS 262

Query: 182 VKFHSEPVLSITVDGLCAGGISGAADHKLVFYTLNHQMGSCMVKREHGLEQPGIAGTSIR 361
           VKFH+EPVLS+ +DG C GGISGAAD K+V ++L++ +GSC++K+E  LE+PGI+GTSIR
Sbjct: 263 VKFHTEPVLSLCIDGWCTGGISGAADDKIVLFSLDNCLGSCVIKKEITLERPGISGTSIR 322

Query: 362 LDGKIAATAGWDHR 403
            DGKIAA AGWDHR
Sbjct: 323 ADGKIAAAAGWDHR 336


>ref|XP_003527666.1| PREDICTED: ASTRA-associated protein 1-like [Glycine max]
          Length = 387

 Score =  200 bits (509), Expect = 9e-50
 Identities = 93/134 (69%), Positives = 111/134 (82%)
 Frame = +2

Query: 2   LPLSCNGSSLDHGTKARGMCMAVQAFVPSESQGFLNVLAGYEDGTMVWWDIRNPGVPLAA 181
           LP S   +S     K RGMCMA+Q F+PSESQGFLNVLAGYEDG+M+WWD+RNPGVP+ +
Sbjct: 201 LPSSNPSNSSSPCNKGRGMCMALQLFLPSESQGFLNVLAGYEDGSMLWWDVRNPGVPVTS 260

Query: 182 VKFHSEPVLSITVDGLCAGGISGAADHKLVFYTLNHQMGSCMVKREHGLEQPGIAGTSIR 361
           VKFHSEPVLS+  DG C GGISGAAD K+V Y+L+H  G+C+VK+E  L++PGI+GTSIR
Sbjct: 261 VKFHSEPVLSVCNDGSCKGGISGAADDKIVMYSLDHSSGTCVVKKEISLDRPGISGTSIR 320

Query: 362 LDGKIAATAGWDHR 403
            DGKIAATAGWDHR
Sbjct: 321 PDGKIAATAGWDHR 334


>ref|XP_003603736.1| Guanine nucleotide-binding protein subunit beta-like protein-like
           protein [Medicago truncatula]
           gi|355492784|gb|AES73987.1| Guanine nucleotide-binding
           protein subunit beta-like protein-like protein [Medicago
           truncatula]
          Length = 364

 Score =  196 bits (497), Expect = 2e-48
 Identities = 91/134 (67%), Positives = 111/134 (82%)
 Frame = +2

Query: 2   LPLSCNGSSLDHGTKARGMCMAVQAFVPSESQGFLNVLAGYEDGTMVWWDIRNPGVPLAA 181
           LP S   +S      ++GMCMA+Q  VPSESQGFLNV+AGYEDGTM+WWD+RNPGVP+++
Sbjct: 180 LPSSIGSNS--SSVSSKGMCMALQLCVPSESQGFLNVMAGYEDGTMLWWDVRNPGVPVSS 237

Query: 182 VKFHSEPVLSITVDGLCAGGISGAADHKLVFYTLNHQMGSCMVKREHGLEQPGIAGTSIR 361
           VKFHSEPVLSI +DG C GGISGAAD ++V Y+L+H  G+C+V +E  LE+PGI+GTSIR
Sbjct: 238 VKFHSEPVLSIGIDGSCKGGISGAADERIVMYSLDHSSGTCVVNKEITLERPGISGTSIR 297

Query: 362 LDGKIAATAGWDHR 403
            DGKIAATAGWDHR
Sbjct: 298 PDGKIAATAGWDHR 311


>gb|ADX87418.1| decreased size exclusion limit 1 [Nicotiana benthamiana]
          Length = 375

 Score =  192 bits (489), Expect = 2e-47
 Identities = 86/129 (66%), Positives = 108/129 (83%)
 Frame = +2

Query: 17  NGSSLDHGTKARGMCMAVQAFVPSESQGFLNVLAGYEDGTMVWWDIRNPGVPLAAVKFHS 196
           +GS  +     RGMCMAVQAF+PSESQG L+++AGYEDG++ WWD+RN GVPL +VKFHS
Sbjct: 194 SGSPSNQTPNQRGMCMAVQAFLPSESQGLLSIMAGYEDGSIAWWDLRNLGVPLTSVKFHS 253

Query: 197 EPVLSITVDGLCAGGISGAADHKLVFYTLNHQMGSCMVKREHGLEQPGIAGTSIRLDGKI 376
           EPVLS+ +DG C GG+SGAAD K++ + L+H MGSC++++E  LE+PGIAGTSIR DGKI
Sbjct: 254 EPVLSLCIDGSCKGGLSGAADEKILMFALDHSMGSCLIRKEIVLERPGIAGTSIRPDGKI 313

Query: 377 AATAGWDHR 403
           AATAGWDHR
Sbjct: 314 AATAGWDHR 322


Top