BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031368
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containi...   181   5e-44
emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]   181   5e-44
ref|XP_002519998.1| pentatricopeptide repeat-containing protein,...   170   1e-40
dbj|BAM64814.1| bvCRP-1 [Beta vulgaris]                               166   2e-39
ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-38

>ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score =  181 bits (459), Expect = 5e-44
 Identities = 81/110 (73%), Positives = 98/110 (89%)
 Frame = -3

Query: 331 RRVYNSIIDTLGKSGELNEAVQVFQNMQREGINPDIVTWNSLIRWHCKAGDVSKALEFFT 152
           +R+YNSIIDT GK GEL+EA++VF+ MQ EG+ PDI+TWNSLI+WHCKAGDV KALE F+
Sbjct: 198 KRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFS 257

Query: 151 KMQEQGLYPDPKIFVTIISRLGEEGKWDLIKENFESMKFRGLKSSGIIFA 2
           KMQE+GLYPDPKIF+TIISRLGE+GKWD+IK NFE+MK RG + SG I+A
Sbjct: 258 KMQEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYA 307


>emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]
          Length = 466

 Score =  181 bits (459), Expect = 5e-44
 Identities = 81/110 (73%), Positives = 98/110 (89%)
 Frame = -3

Query: 331 RRVYNSIIDTLGKSGELNEAVQVFQNMQREGINPDIVTWNSLIRWHCKAGDVSKALEFFT 152
           +R+YNSIIDT GK GEL+EA++VF+ MQ EG+ PDI+TWNSLI+WHCKAGDV KALE F+
Sbjct: 217 KRIYNSIIDTFGKCGELSEALEVFEKMQEEGVKPDIMTWNSLIQWHCKAGDVGKALELFS 276

Query: 151 KMQEQGLYPDPKIFVTIISRLGEEGKWDLIKENFESMKFRGLKSSGIIFA 2
           KMQE+GLYPDPKIF+TIISRLGE+GKWD+IK NFE+MK RG + SG I+A
Sbjct: 277 KMQEEGLYPDPKIFITIISRLGEQGKWDVIKRNFENMKCRGHQRSGAIYA 326


>ref|XP_002519998.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540762|gb|EEF42322.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 498

 Score =  170 bits (430), Expect = 1e-40
 Identities = 78/110 (70%), Positives = 94/110 (85%)
 Frame = -3

Query: 331 RRVYNSIIDTLGKSGELNEAVQVFQNMQREGINPDIVTWNSLIRWHCKAGDVSKALEFFT 152
           + +YNSIIDT GK GEL+EA++V  NMQ++GI PDIVTWNSLIRWHCKAG++SKALE F+
Sbjct: 196 KHIYNSIIDTFGKYGELDEALEVLSNMQQQGITPDIVTWNSLIRWHCKAGNLSKALELFS 255

Query: 151 KMQEQGLYPDPKIFVTIISRLGEEGKWDLIKENFESMKFRGLKSSGIIFA 2
           KMQ QGLYPDPKI VTIISRL E+GKW++I+ENF+ MK  G K SG I+A
Sbjct: 256 KMQAQGLYPDPKILVTIISRLAEQGKWNIIRENFDIMKSWGYKKSGAIYA 305


>dbj|BAM64814.1| bvCRP-1 [Beta vulgaris]
          Length = 517

 Score =  166 bits (420), Expect = 2e-39
 Identities = 75/110 (68%), Positives = 93/110 (84%)
 Frame = -3

Query: 331 RRVYNSIIDTLGKSGELNEAVQVFQNMQREGINPDIVTWNSLIRWHCKAGDVSKALEFFT 152
           RR+YNSIIDT GK GEL+EA++V   M+RE I PDI+TWNSLI+WHCKAGD  KAL+ FT
Sbjct: 256 RRIYNSIIDTFGKYGELDEALKVLVKMRREEIVPDIMTWNSLIKWHCKAGDHMKALDLFT 315

Query: 151 KMQEQGLYPDPKIFVTIISRLGEEGKWDLIKENFESMKFRGLKSSGIIFA 2
           +MQ+QGLYPDPKIF+ +IS+LG  GKWDL++ENFE MK+RG K SG ++A
Sbjct: 316 EMQDQGLYPDPKIFIILISQLGNLGKWDLLRENFEKMKYRGHKKSGAVYA 365


>ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 881

 Score =  162 bits (409), Expect = 3e-38
 Identities = 74/108 (68%), Positives = 89/108 (82%)
 Frame = -3

Query: 325 VYNSIIDTLGKSGELNEAVQVFQNMQREGINPDIVTWNSLIRWHCKAGDVSKALEFFTKM 146
           + NSIIDT GK GEL+EA+++F+ MQ+EG+ P+IVTWNSLI+WHCK GD  KA   FT M
Sbjct: 261 ICNSIIDTFGKYGELDEALKLFKKMQKEGVRPNIVTWNSLIKWHCKEGDFMKAFHLFTDM 320

Query: 145 QEQGLYPDPKIFVTIISRLGEEGKWDLIKENFESMKFRGLKSSGIIFA 2
           QEQGLYPDPKIFVTIIS LGE+GKWD+IK+ FESMK RG K  G ++A
Sbjct: 321 QEQGLYPDPKIFVTIISCLGEQGKWDIIKKYFESMKIRGNKEYGAVYA 368