BLASTX nr result

ID: Coptis23_contig00031353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031353
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532453.1| acyl-CoA thioesterase, putative [Ricinus com...   167   1e-39
ref|XP_002301770.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
ref|XP_003552469.1| PREDICTED: LOW QUALITY PROTEIN: acyl-coenzym...   155   4e-36
ref|XP_003624249.1| Acyl-CoA thioesterase [Medicago truncatula] ...   153   2e-35
ref|XP_003624248.1| Acyl-CoA thioesterase [Medicago truncatula] ...   153   2e-35

>ref|XP_002532453.1| acyl-CoA thioesterase, putative [Ricinus communis]
           gi|223527843|gb|EEF29939.1| acyl-CoA thioesterase,
           putative [Ricinus communis]
          Length = 452

 Score =  167 bits (423), Expect = 1e-39
 Identities = 82/110 (74%), Positives = 90/110 (81%), Gaps = 9/110 (8%)
 Frame = -3

Query: 304 SSPSKTIPVNSTFANPFETIDASSSL---------RKPLSLWPGMYHSPVTNALWEARSN 152
           SS  KTIPV STFANPF+  ++S  L         RKP++LWPGMYHSPVTNALWEARS 
Sbjct: 5   SSSPKTIPVVSTFANPFDNNNSSPLLQVNDNSHQTRKPIALWPGMYHSPVTNALWEARSK 64

Query: 151 IFERLLDPPTDAPPQTELLTKTPSRSRTSILYNFSTDYSLREQYRDPWNE 2
           IFERLLDPP DAPPQ+ELLTKTP +SRTSILYNFS+DY LREQYRDPWNE
Sbjct: 65  IFERLLDPPKDAPPQSELLTKTPKQSRTSILYNFSSDYILREQYRDPWNE 114


>ref|XP_002301770.1| predicted protein [Populus trichocarpa] gi|222843496|gb|EEE81043.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score =  159 bits (403), Expect = 2e-37
 Identities = 77/108 (71%), Positives = 87/108 (80%), Gaps = 7/108 (6%)
 Frame = -3

Query: 304 SSPSKTIPVNSTFANPFETIDASSSL-------RKPLSLWPGMYHSPVTNALWEARSNIF 146
           SS  +TIPV STFANPF+    ++SL       RKP++LWPGMYHSPVTNALWE RS  F
Sbjct: 5   SSSPRTIPVVSTFANPFDNQQDTNSLTGVNGQTRKPIALWPGMYHSPVTNALWETRSKTF 64

Query: 145 ERLLDPPTDAPPQTELLTKTPSRSRTSILYNFSTDYSLREQYRDPWNE 2
           ERLLDPP DAPPQ+ELLTKTP +SRTSILY+FS D+ LREQYRDPWNE
Sbjct: 65  ERLLDPPKDAPPQSELLTKTPKQSRTSILYSFSADHILREQYRDPWNE 112


>ref|XP_003552469.1| PREDICTED: LOW QUALITY PROTEIN: acyl-coenzyme A thioesterase 9,
           mitochondrial-like [Glycine max]
          Length = 454

 Score =  155 bits (393), Expect = 4e-36
 Identities = 79/110 (71%), Positives = 89/110 (80%), Gaps = 5/110 (4%)
 Frame = -3

Query: 316 NNSISSPSKTIPVNSTFANPFETIDA-----SSSLRKPLSLWPGMYHSPVTNALWEARSN 152
           NN+I+  + TIPV STFA      D      SS  RKP++LWPGMYHSPVT ALWEARSN
Sbjct: 9   NNTIAV-NGTIPVASTFATATAPSDNPPPADSSGDRKPIALWPGMYHSPVTTALWEARSN 67

Query: 151 IFERLLDPPTDAPPQTELLTKTPSRSRTSILYNFSTDYSLREQYRDPWNE 2
           IFERLLDPP DAPPQ+ELLT+TPS+SRTSILYNFS+D+ LREQYRDPWNE
Sbjct: 68  IFERLLDPPRDAPPQSELLTRTPSQSRTSILYNFSSDFVLREQYRDPWNE 117


>ref|XP_003624249.1| Acyl-CoA thioesterase [Medicago truncatula]
           gi|355499264|gb|AES80467.1| Acyl-CoA thioesterase
           [Medicago truncatula] gi|388516683|gb|AFK46403.1|
           unknown [Medicago truncatula]
          Length = 423

 Score =  153 bits (387), Expect = 2e-35
 Identities = 73/107 (68%), Positives = 88/107 (82%), Gaps = 1/107 (0%)
 Frame = -3

Query: 319 DNNSISSP-SKTIPVNSTFANPFETIDASSSLRKPLSLWPGMYHSPVTNALWEARSNIFE 143
           +N +I+ P + TIPV+STF NP       S  RKP++LWPGM+HSPVT ALWEAR  IFE
Sbjct: 9   NNTTITIPVNGTIPVSSTFENPIPV--TGSGDRKPIALWPGMFHSPVTTALWEARGKIFE 66

Query: 142 RLLDPPTDAPPQTELLTKTPSRSRTSILYNFSTDYSLREQYRDPWNE 2
           RLLDPP DAPPQ+EL+T+TPS+SRTSILYNFS+D+ LREQYRDPWN+
Sbjct: 67  RLLDPPRDAPPQSELVTRTPSQSRTSILYNFSSDFVLREQYRDPWND 113


>ref|XP_003624248.1| Acyl-CoA thioesterase [Medicago truncatula]
           gi|124361015|gb|ABN08987.1|
           Phosphoglucomutase/phosphomannomutase C terminal;
           Thioesterase superfamily [Medicago truncatula]
           gi|355499263|gb|AES80466.1| Acyl-CoA thioesterase
           [Medicago truncatula]
          Length = 444

 Score =  153 bits (387), Expect = 2e-35
 Identities = 73/107 (68%), Positives = 88/107 (82%), Gaps = 1/107 (0%)
 Frame = -3

Query: 319 DNNSISSP-SKTIPVNSTFANPFETIDASSSLRKPLSLWPGMYHSPVTNALWEARSNIFE 143
           +N +I+ P + TIPV+STF NP       S  RKP++LWPGM+HSPVT ALWEAR  IFE
Sbjct: 9   NNTTITIPVNGTIPVSSTFENPIPV--TGSGDRKPIALWPGMFHSPVTTALWEARGKIFE 66

Query: 142 RLLDPPTDAPPQTELLTKTPSRSRTSILYNFSTDYSLREQYRDPWNE 2
           RLLDPP DAPPQ+EL+T+TPS+SRTSILYNFS+D+ LREQYRDPWN+
Sbjct: 67  RLLDPPRDAPPQSELVTRTPSQSRTSILYNFSSDFVLREQYRDPWND 113


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