BLASTX nr result

ID: Coptis23_contig00031350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031350
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310983.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002337234.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_002338144.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_002278133.1| PREDICTED: uncharacterized protein LOC100244...    86   2e-15
ref|XP_003555487.1| PREDICTED: uncharacterized protein LOC100805...    80   2e-13

>ref|XP_002310983.1| predicted protein [Populus trichocarpa] gi|222850803|gb|EEE88350.1|
           predicted protein [Populus trichocarpa]
          Length = 84

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/82 (56%), Positives = 65/82 (79%)
 Frame = +1

Query: 124 MHRSASTSRASDEFFINLSPASKGSPGVKVADVDNLAAYDPIADISKKEITSHIKSSGEN 303
           MHRSAS +RASDEF I+L+PA+  SP +K      L  +DPI+D++KK++  H KS GEN
Sbjct: 1   MHRSASGTRASDEFLISLAPAADVSP-LKNTAYSELPTHDPISDVTKKDLAWHHKSMGEN 59

Query: 304 SIHIIPIVLIVCAITLWVFSHP 369
           ++H+IP+VLI+CA+TLW+FS+P
Sbjct: 60  AVHLIPVVLILCALTLWIFSYP 81


>ref|XP_002337234.1| predicted protein [Populus trichocarpa] gi|222838528|gb|EEE76893.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 47/82 (57%), Positives = 63/82 (76%)
 Frame = +1

Query: 124 MHRSASTSRASDEFFINLSPASKGSPGVKVADVDNLAAYDPIADISKKEITSHIKSSGEN 303
           MH SAS +RASDEF INL+PA+  SP +K      L  +DPI+D++KK++  H KS GEN
Sbjct: 1   MHWSASGTRASDEFLINLAPAADVSP-LKNTAYTELPTHDPISDVTKKDLAWHHKSIGEN 59

Query: 304 SIHIIPIVLIVCAITLWVFSHP 369
           ++H+IP VLI+CA+TLW+FSHP
Sbjct: 60  AVHLIPGVLILCALTLWIFSHP 81


>ref|XP_002338144.1| predicted protein [Populus trichocarpa] gi|222871048|gb|EEF08179.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 47/82 (57%), Positives = 63/82 (76%)
 Frame = +1

Query: 124 MHRSASTSRASDEFFINLSPASKGSPGVKVADVDNLAAYDPIADISKKEITSHIKSSGEN 303
           MH SAS +RASDEF I+L+PA+  SP +K      L  +DPI+D++KK++  H KS GEN
Sbjct: 1   MHWSASGTRASDEFLISLAPAADVSP-LKNTAYTELPTHDPISDVTKKDLAWHHKSIGEN 59

Query: 304 SIHIIPIVLIVCAITLWVFSHP 369
           +IH+IP VLI+CA+TLW+FSHP
Sbjct: 60  AIHLIPGVLILCALTLWIFSHP 81


>ref|XP_002278133.1| PREDICTED: uncharacterized protein LOC100244287 [Vitis vinifera]
           gi|297744976|emb|CBI38568.3| unnamed protein product
           [Vitis vinifera]
          Length = 148

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/100 (44%), Positives = 71/100 (71%), Gaps = 1/100 (1%)
 Frame = +1

Query: 124 MHRSASTSRASDEFFINLSPASKGSPGVKVA-DVDNLAAYDPIADISKKEITSHIKSSGE 300
           M+RS S++R ++++ IN+   S  SPG++V+   + L  YDP+++++KKE  S IK + E
Sbjct: 1   MYRSLSSTRVAEDYNINVGSPSSKSPGLRVSVSNEELPVYDPVSEMAKKE-RSRIKFA-E 58

Query: 301 NSIHIIPIVLIVCAITLWVFSHPVVDLTKTADVAAVKVEG 420
           N++H+IP VL++CAI LWVFS+P VD+  T D  A ++ G
Sbjct: 59  NAVHVIPFVLLLCAIILWVFSNPDVDVGITNDSIAARIRG 98


>ref|XP_003555487.1| PREDICTED: uncharacterized protein LOC100805238 [Glycine max]
          Length = 142

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 45/102 (44%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
 Frame = +1

Query: 124 MHRSASTSRASDEFFINL---SPASKGSPGVKVADVDNLAAYDPIADISKKEITSHIKSS 294
           MHRSAS +R SD++F +    SP+S       + D +NL  YDPIA+++K+E  + +K +
Sbjct: 1   MHRSASWNRFSDDYFKHATTSSPSSGHRSSYSMFDGNNLPTYDPIAELAKRE-RARVKFA 59

Query: 295 GENSIHIIPIVLIVCAITLWVFSHPVVDLTKTADVAAVKVEG 420
            EN++H+IP+VLIVCAI LW+FS+P  D+    D    ++EG
Sbjct: 60  -ENAVHVIPLVLIVCAIILWLFSNP--DVGIIGDPIEARIEG 98


Top