BLASTX nr result

ID: Coptis23_contig00031319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031319
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606128.1| hypothetical protein MTR_4g053410 [Medicago ...    67   2e-09
ref|XP_002523784.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
ref|XP_002306230.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
gb|AAM61147.1| unknown [Arabidopsis thaliana]                          66   3e-09
ref|NP_565655.1| S-adenosylmethionine-dependent methyltransferas...    66   3e-09

>ref|XP_003606128.1| hypothetical protein MTR_4g053410 [Medicago truncatula]
           gi|355507183|gb|AES88325.1| hypothetical protein
           MTR_4g053410 [Medicago truncatula]
          Length = 388

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -3

Query: 121 NDTHSSSNDIPSKFLLYQQSVQMPKGDISYLHKFFLMYIG 2
           ND H S +D+PSKFLLYQQSVQ PKGDISYL KFFLMY+G
Sbjct: 59  NDQHPS-HDMPSKFLLYQQSVQSPKGDISYLQKFFLMYVG 97


>ref|XP_002523784.1| conserved hypothetical protein [Ricinus communis]
           gi|223536872|gb|EEF38510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 394

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = -3

Query: 106 SSNDIPSKFLLYQQSVQMPKGDISYLHKFFLMYIG 2
           +SND+PSKFLLYQQSVQ PKGDISYL KFFL+Y+G
Sbjct: 68  ASNDVPSKFLLYQQSVQSPKGDISYLQKFFLLYVG 102


>ref|XP_002306230.1| predicted protein [Populus trichocarpa] gi|222849194|gb|EEE86741.1|
           predicted protein [Populus trichocarpa]
          Length = 406

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = -3

Query: 121 NDTHSSSNDIPSKFLLYQQSVQMPKGDISYLHKFFLMYIG 2
           +D  +S  D+PSKFLLYQQSVQ PKGDISYL KFFLMY+G
Sbjct: 74  DDKTASKKDMPSKFLLYQQSVQSPKGDISYLQKFFLMYVG 113


>gb|AAM61147.1| unknown [Arabidopsis thaliana]
          Length = 372

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -3

Query: 121 NDTHSSSNDIPSKFLLYQQSVQMPKGDISYLHKFFLMYIG 2
           ND + SS D+PSKFLLYQQSVQ PKGDISYL KFFLMY+G
Sbjct: 50  NDGNESS-DLPSKFLLYQQSVQSPKGDISYLQKFFLMYVG 88


>ref|NP_565655.1| S-adenosylmethionine-dependent methyltransferase domain-containing
           protein [Arabidopsis thaliana]
           gi|18175868|gb|AAL59942.1| unknown protein [Arabidopsis
           thaliana] gi|20197453|gb|AAC73041.2| expressed protein
           [Arabidopsis thaliana] gi|20197666|gb|AAM15191.1|
           expressed protein [Arabidopsis thaliana]
           gi|20465665|gb|AAM20301.1| unknown protein [Arabidopsis
           thaliana] gi|330252924|gb|AEC08018.1|
           S-adenosylmethionine-dependent methyltransferase
           domain-containing protein [Arabidopsis thaliana]
          Length = 372

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -3

Query: 121 NDTHSSSNDIPSKFLLYQQSVQMPKGDISYLHKFFLMYIG 2
           ND + SS D+PSKFLLYQQSVQ PKGDISYL KFFLMY+G
Sbjct: 50  NDGNESS-DLPSKFLLYQQSVQSPKGDISYLQKFFLMYVG 88


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