BLASTX nr result

ID: Coptis23_contig00031302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031302
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001057481.2| Os06g0310200 [Oryza sativa Japonica Group] g...   143   1e-32
ref|NP_001173937.1| Os04g0424200 [Oryza sativa Japonica Group] g...   143   1e-32
ref|NP_001050457.2| Os03g0440200 [Oryza sativa Japonica Group] g...   143   1e-32
ref|XP_003579742.1| PREDICTED: probable helicase DDB_G0274399-li...   141   6e-32
ref|XP_003579741.1| PREDICTED: probable helicase DDB_G0274399-li...   141   6e-32

>ref|NP_001057481.2| Os06g0310200 [Oryza sativa Japonica Group]
           gi|255676976|dbj|BAF19395.2| Os06g0310200 [Oryza sativa
           Japonica Group]
          Length = 1029

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/98 (67%), Positives = 80/98 (81%)
 Frame = -2

Query: 296 NTSQMDAIHVGLSRKTFVLIQGPPGTGKTQTILGLLSAILHSTPVRGKSKGGLRDKRLVR 117
           N SQ+DA++ GLSR++FVLIQGPPGTGKTQTILGLLSA+LHS P R ++KGG   K+   
Sbjct: 295 NDSQLDAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARMQTKGGFDVKKHGP 354

Query: 116 ELDIQEKYNHWKLASPWLYDINPRDKIMPIDGDDGFFP 3
           ELDI+ K+ HW  ASPWL  +NPRD IMP+DGDDGF+P
Sbjct: 355 ELDIEGKHAHWMKASPWLIGVNPRDLIMPVDGDDGFYP 392


>ref|NP_001173937.1| Os04g0424200 [Oryza sativa Japonica Group]
           gi|255675460|dbj|BAH92665.1| Os04g0424200 [Oryza sativa
           Japonica Group]
          Length = 836

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/98 (67%), Positives = 80/98 (81%)
 Frame = -2

Query: 296 NTSQMDAIHVGLSRKTFVLIQGPPGTGKTQTILGLLSAILHSTPVRGKSKGGLRDKRLVR 117
           N SQ+DA++ GLSR++FVLIQGPPGTGKTQTILGLLSA+LHS P R ++KGG   K+   
Sbjct: 265 NDSQLDAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARMQTKGGFDVKKHGP 324

Query: 116 ELDIQEKYNHWKLASPWLYDINPRDKIMPIDGDDGFFP 3
           ELDI+ K+ HW  ASPWL  +NPRD IMP+DGDDGF+P
Sbjct: 325 ELDIEGKHAHWMKASPWLIGVNPRDLIMPVDGDDGFYP 362


>ref|NP_001050457.2| Os03g0440200 [Oryza sativa Japonica Group]
           gi|255674627|dbj|BAF12371.2| Os03g0440200 [Oryza sativa
           Japonica Group]
          Length = 824

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/98 (67%), Positives = 80/98 (81%)
 Frame = -2

Query: 296 NTSQMDAIHVGLSRKTFVLIQGPPGTGKTQTILGLLSAILHSTPVRGKSKGGLRDKRLVR 117
           N SQ+DA++ GLSR++FVLIQGPPGTGKTQTILGLLSA+LHS P R ++KGG   K+   
Sbjct: 265 NDSQLDAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARMQTKGGFDVKKHGP 324

Query: 116 ELDIQEKYNHWKLASPWLYDINPRDKIMPIDGDDGFFP 3
           ELDI+ K+ HW  ASPWL  +NPRD IMP+DGDDGF+P
Sbjct: 325 ELDIEGKHAHWMKASPWLIGVNPRDLIMPVDGDDGFYP 362


>ref|XP_003579742.1| PREDICTED: probable helicase DDB_G0274399-like isoform 2
           [Brachypodium distachyon]
          Length = 820

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/98 (66%), Positives = 79/98 (80%)
 Frame = -2

Query: 296 NTSQMDAIHVGLSRKTFVLIQGPPGTGKTQTILGLLSAILHSTPVRGKSKGGLRDKRLVR 117
           N SQ+DA++ GLSR++FVLIQGPPGTGKTQTILGLLSA+LHS P R ++KGG   ++   
Sbjct: 257 NDSQLDAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARVQTKGGFDVEKHGP 316

Query: 116 ELDIQEKYNHWKLASPWLYDINPRDKIMPIDGDDGFFP 3
           ELDI+ K+ HW  ASPWL   NPRD IMP+DGDDGF+P
Sbjct: 317 ELDIEGKHTHWMKASPWLIGANPRDLIMPVDGDDGFYP 354


>ref|XP_003579741.1| PREDICTED: probable helicase DDB_G0274399-like isoform 1
           [Brachypodium distachyon]
          Length = 802

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/98 (66%), Positives = 79/98 (80%)
 Frame = -2

Query: 296 NTSQMDAIHVGLSRKTFVLIQGPPGTGKTQTILGLLSAILHSTPVRGKSKGGLRDKRLVR 117
           N SQ+DA++ GLSR++FVLIQGPPGTGKTQTILGLLSA+LHS P R ++KGG   ++   
Sbjct: 257 NDSQLDAVNAGLSRRSFVLIQGPPGTGKTQTILGLLSAVLHSAPARVQTKGGFDVEKHGP 316

Query: 116 ELDIQEKYNHWKLASPWLYDINPRDKIMPIDGDDGFFP 3
           ELDI+ K+ HW  ASPWL   NPRD IMP+DGDDGF+P
Sbjct: 317 ELDIEGKHTHWMKASPWLIGANPRDLIMPVDGDDGFYP 354


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