BLASTX nr result

ID: Coptis23_contig00031300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031300
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284383.1| PREDICTED: oxysterol-binding protein-related...    80   2e-13
ref|XP_002513820.1| Oxysterol-binding protein, putative [Ricinus...    75   4e-12
ref|NP_849343.2| OSBP(oxysterol binding protein)-related protein...    74   2e-11
ref|NP_974518.1| OSBP(oxysterol binding protein)-related protein...    74   2e-11
ref|NP_192558.2| OSBP(oxysterol binding protein)-related protein...    74   2e-11

>ref|XP_002284383.1| PREDICTED: oxysterol-binding protein-related protein 1C [Vitis
           vinifera] gi|302141870|emb|CBI19073.3| unnamed protein
           product [Vitis vinifera]
          Length = 797

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 57/116 (49%), Positives = 68/116 (58%), Gaps = 10/116 (8%)
 Frame = +1

Query: 52  YSCITTISSVNFDFFYDLLLPHATMSQIPT------VRSNSMNHRTRQSDTTTGNGNKQL 213
           + CITT+S  N        LP   MS +P       VRS+S N    +S+    N    +
Sbjct: 4   FCCITTVSDPNSGK-PSHSLPEFHMSPLPPAVGGGGVRSDSGN----RSNNLNHNHGNNI 58

Query: 214 TNH----KSFSRLPSMQEPLPRDVKIINDIVGGNGISGILYKWVNYGKGWRPRWFV 369
           T+H    +S SR PS+     R+VKI NDIVG NGISGILYKWVNYGKGWRPRWFV
Sbjct: 59  TDHGRLTESMSRPPSICGD-QREVKI-NDIVG-NGISGILYKWVNYGKGWRPRWFV 111


>ref|XP_002513820.1| Oxysterol-binding protein, putative [Ricinus communis]
           gi|223546906|gb|EEF48403.1| Oxysterol-binding protein,
           putative [Ricinus communis]
          Length = 795

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
 Frame = +1

Query: 148 SNSMNHRTRQSDTTTGNGNKQLTNHKSFSRLPSMQEPLPRDVKI---INDIVGGNGISGI 318
           +NS ++ T     T  N   Q +   S S L +    LPR+ ++   INDIVG NGISGI
Sbjct: 31  NNSSSNTTNLLLLTNSNNRHQRSLTASLSALTANAVSLPREQQVDVRINDIVG-NGISGI 89

Query: 319 LYKWVNYGKGWRPRWFV 369
           LYKWVNYGKGWRPRWFV
Sbjct: 90  LYKWVNYGKGWRPRWFV 106


>ref|NP_849343.2| OSBP(oxysterol binding protein)-related protein 1C [Arabidopsis
           thaliana] gi|332657207|gb|AEE82607.1| OSBP(oxysterol
           binding protein)-related protein 1C [Arabidopsis
           thaliana]
          Length = 813

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/76 (56%), Positives = 48/76 (63%)
 Frame = +1

Query: 142 VRSNSMNHRTRQSDTTTGNGNKQLTNHKSFSRLPSMQEPLPRDVKIINDIVGGNGISGIL 321
           + S S NH   QSD T   G + L        LP+     P DVKI NDIVG NGI+GIL
Sbjct: 62  IHSLSFNHH--QSDVTDRLGQRVLA-------LPAAVREPPVDVKI-NDIVG-NGIAGIL 110

Query: 322 YKWVNYGKGWRPRWFV 369
           YKWVNYG+GWRPRWFV
Sbjct: 111 YKWVNYGRGWRPRWFV 126


>ref|NP_974518.1| OSBP(oxysterol binding protein)-related protein 1C [Arabidopsis
           thaliana] gi|332657205|gb|AEE82605.1| OSBP(oxysterol
           binding protein)-related protein 1C [Arabidopsis
           thaliana]
          Length = 813

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/76 (56%), Positives = 48/76 (63%)
 Frame = +1

Query: 142 VRSNSMNHRTRQSDTTTGNGNKQLTNHKSFSRLPSMQEPLPRDVKIINDIVGGNGISGIL 321
           + S S NH   QSD T   G + L        LP+     P DVKI NDIVG NGI+GIL
Sbjct: 62  IHSLSFNHH--QSDVTDRLGQRVLA-------LPAAVREPPVDVKI-NDIVG-NGIAGIL 110

Query: 322 YKWVNYGKGWRPRWFV 369
           YKWVNYG+GWRPRWFV
Sbjct: 111 YKWVNYGRGWRPRWFV 126


>ref|NP_192558.2| OSBP(oxysterol binding protein)-related protein 1C [Arabidopsis
           thaliana] gi|75154096|sp|Q8L751.1|ORP1C_ARATH RecName:
           Full=Oxysterol-binding protein-related protein 1C;
           AltName: Full=OSBP-related protein 1C
           gi|22654958|gb|AAM98072.1| AT4g08180/T12G13_20
           [Arabidopsis thaliana] gi|332657206|gb|AEE82606.1|
           OSBP(oxysterol binding protein)-related protein 1C
           [Arabidopsis thaliana]
          Length = 814

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/76 (56%), Positives = 48/76 (63%)
 Frame = +1

Query: 142 VRSNSMNHRTRQSDTTTGNGNKQLTNHKSFSRLPSMQEPLPRDVKIINDIVGGNGISGIL 321
           + S S NH   QSD T   G + L        LP+     P DVKI NDIVG NGI+GIL
Sbjct: 62  IHSLSFNHH--QSDVTDRLGQRVLA-------LPAAVREPPVDVKI-NDIVG-NGIAGIL 110

Query: 322 YKWVNYGKGWRPRWFV 369
           YKWVNYG+GWRPRWFV
Sbjct: 111 YKWVNYGRGWRPRWFV 126


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