BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031296
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containi...   171   2e-52
emb|CBI15551.3| unnamed protein product [Vitis vinifera]              171   2e-52
ref|XP_002534168.1| pentatricopeptide repeat-containing protein,...   164   4e-50
ref|XP_003631084.1| Pentatricopeptide repeat-containing protein ...   156   2e-46
gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]   156   2e-46

>ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  171 bits (434), Expect(2) = 2e-52
 Identities = 81/109 (74%), Positives = 94/109 (86%)
 Frame = -1

Query: 327 GM*EKKRLFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAM 148
           G  ++ RL DAR +F+R+PER+E+SWNTMISGYAQNG++LEAQ+LFE SP R+V TWTAM
Sbjct: 213 GYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAM 272

Query: 147 VSGYVQNGMLDKAKRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
           VSGYVQNGMLD+A+R FD MPEKN VSWNAII GY QC RMD ARELFE
Sbjct: 273 VSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFE 321



 Score = 59.3 bits (142), Expect(2) = 2e-52
 Identities = 22/37 (59%), Positives = 32/37 (86%)
 Frame = -3

Query: 412 QNGRFESARQLFEAKSDWEIVSWNSMLAGYVRKKKIV 302
           QNGR E AR+LFE+K+DWE++SWN M+ GYV++ ++V
Sbjct: 185 QNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLV 221



 Score =  102 bits (253), Expect(2) = 1e-24
 Identities = 43/104 (41%), Positives = 73/104 (70%)
 Frame = -1

Query: 312 KRLFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYV 133
           + L  AR LF+++PER+ +SWN M+SGYAQNG + EA+++F+  P +N ++W  M++ YV
Sbjct: 125 RNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYV 184

Query: 132 QNGMLDKAKRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
           QNG ++ A+R F+   +  ++SWN ++ GY +  R+  AR +F+
Sbjct: 185 QNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFD 228



 Score = 35.8 bits (81), Expect(2) = 1e-24
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = -3

Query: 409 NGRFESARQLFEAKSDWEIVSWNSMLAGYVRKKKI 305
           N +F  ARQLFE     ++VSWN M++G VR + +
Sbjct: 93  NDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNL 127



 Score =  107 bits (268), Expect(2) = 2e-24
 Identities = 50/103 (48%), Positives = 70/103 (67%)
 Frame = -1

Query: 309 RLFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQ 130
           + + AR LF ++P R+ +SWN MISG  +   +  A+ LF+  P R+VV+W AM+SGY Q
Sbjct: 95  KFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQ 154

Query: 129 NGMLDKAKRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
           NG + +AK  FDEMP KN +SWN ++  Y Q GR++ AR LFE
Sbjct: 155 NGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFE 197



 Score = 29.3 bits (64), Expect(2) = 2e-24
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -3

Query: 412 QNGRFESARQLFEAKSDWEIVSWNSMLAGYVRKKK 308
           +NG+ +SA +LF +      +SWN+M++G +   K
Sbjct: 61  RNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDK 95



 Score =  102 bits (255), Expect(2) = 2e-23
 Identities = 46/101 (45%), Positives = 70/101 (69%)
 Frame = -1

Query: 306 LFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQN 127
           L +AR +F+ +PE+N +SWN +I+GY Q  +M +A++LFE  P +NV +W  M++GY QN
Sbjct: 282 LDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQN 341

Query: 126 GMLDKAKRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELF 4
           G + +A+  FD MP+++ +SW AII GY Q G  + A  LF
Sbjct: 342 GDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLF 382



 Score = 31.2 bits (69), Expect(2) = 2e-23
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -3

Query: 412 QNGRFESARQLFEAKSDWEIVSWNSMLAGYVR 317
           QNG    A++LFE     ++ +W +M++GYV+
Sbjct: 247 QNGELLEAQRLFEESPVRDVFTWTAMVSGYVQ 278



 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/96 (47%), Positives = 67/96 (69%)
 Frame = -1

Query: 288 LFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQNGMLDKA 109
           LFN +P R+ ISWN MISG   N +   A++LFE  P+R++V+W  M+SG V+   L  A
Sbjct: 71  LFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAA 130

Query: 108 KRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
           +  FD+MPE++VVSWNA++ GY Q G +  A+E+F+
Sbjct: 131 RLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFD 166



 Score = 75.9 bits (185), Expect(2) = 1e-17
 Identities = 34/75 (45%), Positives = 51/75 (68%)
 Frame = -1

Query: 312 KRLFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYV 133
           KR+  AR LF  +P +N  SWNTMI+GYAQNG + +A+  F+  P R+ ++W A+++GY 
Sbjct: 311 KRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYA 370

Query: 132 QNGMLDKAKRTFDEM 88
           Q+G  ++A   F EM
Sbjct: 371 QSGYGEEALHLFVEM 385



 Score = 38.5 bits (88), Expect(2) = 1e-17
 Identities = 15/36 (41%), Positives = 26/36 (72%)
 Frame = -3

Query: 412 QNGRFESARQLFEAKSDWEIVSWNSMLAGYVRKKKI 305
           QNG  + AR++F+   +   VSWN+++AGYV+ K++
Sbjct: 278 QNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRM 313



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/86 (36%), Positives = 52/86 (60%)
 Frame = -1

Query: 258 ISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQNGMLDKAKRTFDEMPEK 79
           + WN  I+ + +NGQ   A +LF   P R+ ++W AM+SG + N     A++ F++MP +
Sbjct: 50  VKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTR 109

Query: 78  NVVSWNAIIVGYTQCGRMDLARELFE 1
           ++VSWN +I G  +   +  AR LF+
Sbjct: 110 DLVSWNVMISGCVRYRNLRAARLLFD 135


>emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  171 bits (434), Expect(2) = 2e-52
 Identities = 81/109 (74%), Positives = 94/109 (86%)
 Frame = -1

Query: 327 GM*EKKRLFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAM 148
           G  ++ RL DAR +F+R+PER+E+SWNTMISGYAQNG++LEAQ+LFE SP R+V TWTAM
Sbjct: 132 GYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAM 191

Query: 147 VSGYVQNGMLDKAKRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
           VSGYVQNGMLD+A+R FD MPEKN VSWNAII GY QC RMD ARELFE
Sbjct: 192 VSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFE 240



 Score = 59.3 bits (142), Expect(2) = 2e-52
 Identities = 22/37 (59%), Positives = 32/37 (86%)
 Frame = -3

Query: 412 QNGRFESARQLFEAKSDWEIVSWNSMLAGYVRKKKIV 302
           QNGR E AR+LFE+K+DWE++SWN M+ GYV++ ++V
Sbjct: 104 QNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLV 140



 Score =  102 bits (255), Expect(2) = 2e-23
 Identities = 46/101 (45%), Positives = 70/101 (69%)
 Frame = -1

Query: 306 LFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQN 127
           L +AR +F+ +PE+N +SWN +I+GY Q  +M +A++LFE  P +NV +W  M++GY QN
Sbjct: 201 LDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQN 260

Query: 126 GMLDKAKRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELF 4
           G + +A+  FD MP+++ +SW AII GY Q G  + A  LF
Sbjct: 261 GDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLF 301



 Score = 31.2 bits (69), Expect(2) = 2e-23
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -3

Query: 412 QNGRFESARQLFEAKSDWEIVSWNSMLAGYVR 317
           QNG    A++LFE     ++ +W +M++GYV+
Sbjct: 166 QNGELLEAQRLFEESPVRDVFTWTAMVSGYVQ 197



 Score =  102 bits (253), Expect = 4e-20
 Identities = 43/104 (41%), Positives = 73/104 (70%)
 Frame = -1

Query: 312 KRLFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYV 133
           + L  AR LF+++PER+ +SWN M+SGYAQNG + EA+++F+  P +N ++W  M++ YV
Sbjct: 44  RNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYV 103

Query: 132 QNGMLDKAKRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
           QNG ++ A+R F+   +  ++SWN ++ GY +  R+  AR +F+
Sbjct: 104 QNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFD 147



 Score = 75.9 bits (185), Expect(2) = 1e-17
 Identities = 34/75 (45%), Positives = 51/75 (68%)
 Frame = -1

Query: 312 KRLFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYV 133
           KR+  AR LF  +P +N  SWNTMI+GYAQNG + +A+  F+  P R+ ++W A+++GY 
Sbjct: 230 KRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYA 289

Query: 132 QNGMLDKAKRTFDEM 88
           Q+G  ++A   F EM
Sbjct: 290 QSGYGEEALHLFVEM 304



 Score = 38.5 bits (88), Expect(2) = 1e-17
 Identities = 15/36 (41%), Positives = 26/36 (72%)
 Frame = -3

Query: 412 QNGRFESARQLFEAKSDWEIVSWNSMLAGYVRKKKI 305
           QNG  + AR++F+   +   VSWN+++AGYV+ K++
Sbjct: 197 QNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRM 232



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/80 (47%), Positives = 53/80 (66%)
 Frame = -1

Query: 240 ISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQNGMLDKAKRTFDEMPEKNVVSWN 61
           + G  +   +  A+ LF+  P R+VV+W AM+SGY QNG + +AK  FDEMP KN +SWN
Sbjct: 37  LRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWN 96

Query: 60  AIIVGYTQCGRMDLARELFE 1
            ++  Y Q GR++ AR LFE
Sbjct: 97  GMLAAYVQNGRIEDARRLFE 116


>ref|XP_002534168.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525755|gb|EEF28217.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 513

 Score =  164 bits (416), Expect(2) = 4e-50
 Identities = 76/109 (69%), Positives = 95/109 (87%)
 Frame = -1

Query: 327 GM*EKKRLFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAM 148
           G  +KKRL DAR +F+RIP R+E+SWNTMI+GYAQNG++ EA+KLFE SP+++V TWTAM
Sbjct: 221 GFVKKKRLVDARRVFDRIPVRDEVSWNTMITGYAQNGELEEARKLFEESPTQDVFTWTAM 280

Query: 147 VSGYVQNGMLDKAKRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
           VSGYVQNGM+D+A+  FD+MPEKN VSWNA+I GY QC RMD+A+ELFE
Sbjct: 281 VSGYVQNGMVDEARSIFDKMPEKNSVSWNAMIAGYVQCKRMDMAKELFE 329



 Score = 58.5 bits (140), Expect(2) = 4e-50
 Identities = 22/37 (59%), Positives = 32/37 (86%)
 Frame = -3

Query: 412 QNGRFESARQLFEAKSDWEIVSWNSMLAGYVRKKKIV 302
           QNGR E AR+LFE+K DW++VSWN ++ G+V+KK++V
Sbjct: 193 QNGRIEDARRLFESKMDWDVVSWNCLMGGFVKKKRLV 229



 Score =  104 bits (259), Expect(2) = 3e-27
 Identities = 46/109 (42%), Positives = 74/109 (67%)
 Frame = -1

Query: 327 GM*EKKRLFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAM 148
           G    K L DAR LF R+P R+ +SWN M+SGYAQNG + EA+++F+  P +N ++W  +
Sbjct: 128 GYVRNKNLTDARGLFERMPRRDVVSWNAMLSGYAQNGFIAEAREIFDEMPVKNSISWNGL 187

Query: 147 VSGYVQNGMLDKAKRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
           ++ YVQNG ++ A+R F+   + +VVSWN ++ G+ +  R+  AR +F+
Sbjct: 188 LAAYVQNGRIEDARRLFESKMDWDVVSWNCLMGGFVKKKRLVDARRVFD 236



 Score = 42.4 bits (98), Expect(2) = 3e-27
 Identities = 16/35 (45%), Positives = 26/35 (74%)
 Frame = -3

Query: 409 NGRFESARQLFEAKSDWEIVSWNSMLAGYVRKKKI 305
           NGRF+ AR++F+   + ++ +WN ML+GYVR K +
Sbjct: 101 NGRFDLAREMFDKMPERDLFTWNVMLSGYVRNKNL 135



 Score =  115 bits (287), Expect(2) = 7e-26
 Identities = 50/99 (50%), Positives = 72/99 (72%)
 Frame = -1

Query: 297 ARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQNGML 118
           AR +F+++PER+  +WN M+SGY +N  + +A+ LFE  P R+VV+W AM+SGY QNG +
Sbjct: 107 AREMFDKMPERDLFTWNVMLSGYVRNKNLTDARGLFERMPRRDVVSWNAMLSGYAQNGFI 166

Query: 117 DKAKRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
            +A+  FDEMP KN +SWN ++  Y Q GR++ AR LFE
Sbjct: 167 AEAREIFDEMPVKNSISWNGLLAAYVQNGRIEDARRLFE 205



 Score = 26.9 bits (58), Expect(2) = 7e-26
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 412 QNGRFESARQLFEAKSDWEIVSWNSMLAGYV 320
           +NG+  SA Q+F        V++N+M++GY+
Sbjct: 69  RNGQCHSALQVFNTMPRRSTVTYNAMISGYL 99



 Score =  100 bits (250), Expect(2) = 1e-24
 Identities = 43/99 (43%), Positives = 69/99 (69%)
 Frame = -1

Query: 300 DARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQNGM 121
           +AR +F+++PE+N +SWN MI+GY Q  +M  A++LFE  P RN+ +W  M++GY Q+G 
Sbjct: 292 EARSIFDKMPEKNSVSWNAMIAGYVQCKRMDMAKELFEAMPFRNISSWNTMITGYAQSGN 351

Query: 120 LDKAKRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELF 4
           +  A+  FD MP+++ +SW+A+I GY Q G  + A  L+
Sbjct: 352 VPHARNLFDRMPQRDSISWSAMIAGYVQNGCNEEAVHLY 390



 Score = 37.0 bits (84), Expect(2) = 1e-24
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -3

Query: 412 QNGRFESARQLFEAKSDWEIVSWNSMLAGYVR 317
           QNG  E AR+LFE     ++ +W +M++GYV+
Sbjct: 255 QNGELEEARKLFEESPTQDVFTWTAMVSGYVQ 286



 Score = 80.5 bits (197), Expect(2) = 3e-19
 Identities = 40/105 (38%), Positives = 64/105 (60%), Gaps = 4/105 (3%)
 Frame = -1

Query: 312 KRLFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYV 133
           KR+  A+ LF  +P RN  SWNTMI+GYAQ+G +  A+ LF+  P R+ ++W+AM++GYV
Sbjct: 319 KRMDMAKELFEAMPFRNISSWNTMITGYAQSGNVPHARNLFDRMPQRDSISWSAMIAGYV 378

Query: 132 QNGMLDKAKRTFDEMPEK----NVVSWNAIIVGYTQCGRMDLARE 10
           QNG  ++A   + EM       N  S+ +++        +DL ++
Sbjct: 379 QNGCNEEAVHLYVEMKRDGESLNRSSFTSVLTACADIAALDLGKQ 423



 Score = 39.3 bits (90), Expect(2) = 3e-19
 Identities = 16/36 (44%), Positives = 25/36 (69%)
 Frame = -3

Query: 412 QNGRFESARQLFEAKSDWEIVSWNSMLAGYVRKKKI 305
           QNG  + AR +F+   +   VSWN+M+AGYV+ K++
Sbjct: 286 QNGMVDEARSIFDKMPEKNSVSWNAMIAGYVQCKRM 321



 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 43/96 (44%), Positives = 67/96 (69%)
 Frame = -1

Query: 288 LFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQNGMLDKA 109
           +FN +P R+ +++N MISGY  NG+   A+++F+  P R++ TW  M+SGYV+N  L  A
Sbjct: 79  VFNTMPRRSTVTYNAMISGYLSNGRFDLAREMFDKMPERDLFTWNVMLSGYVRNKNLTDA 138

Query: 108 KRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
           +  F+ MP ++VVSWNA++ GY Q G +  ARE+F+
Sbjct: 139 RGLFERMPRRDVVSWNAMLSGYAQNGFIAEAREIFD 174



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/86 (40%), Positives = 56/86 (65%)
 Frame = -1

Query: 258 ISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQNGMLDKAKRTFDEMPEK 79
           ++WN  I+ + +NGQ   A ++F   P R+ VT+ AM+SGY+ NG  D A+  FD+MPE+
Sbjct: 58  VNWNMAITTHMRNGQCHSALQVFNTMPRRSTVTYNAMISGYLSNGRFDLAREMFDKMPER 117

Query: 78  NVVSWNAIIVGYTQCGRMDLARELFE 1
           ++ +WN ++ GY +   +  AR LFE
Sbjct: 118 DLFTWNVMLSGYVRNKNLTDARGLFE 143



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 23/63 (36%), Positives = 40/63 (63%)
 Frame = -1

Query: 189 EGSPSRNVVTWTAMVSGYVQNGMLDKAKRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARE 10
           E +   ++V W   ++ +++NG    A + F+ MP ++ V++NA+I GY   GR DLARE
Sbjct: 50  EKTTDSDIVNWNMAITTHMRNGQCHSALQVFNTMPRRSTVTYNAMISGYLSNGRFDLARE 109

Query: 9   LFE 1
           +F+
Sbjct: 110 MFD 112


>ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355525106|gb|AET05560.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  156 bits (395), Expect(2) = 2e-46
 Identities = 74/109 (67%), Positives = 91/109 (83%)
 Frame = -1

Query: 327 GM*EKKRLFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAM 148
           G   KK+L DARWLF+++P R+ ISWNTMISGYAQ G + +A++LF+ SP+R+V TWTAM
Sbjct: 213 GFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAM 272

Query: 147 VSGYVQNGMLDKAKRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
           VSGYVQNGMLD+AK  FDEMPEKN VS+NA+I GY Q  +MD+ARELFE
Sbjct: 273 VSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFE 321



 Score = 54.3 bits (129), Expect(2) = 2e-46
 Identities = 21/35 (60%), Positives = 29/35 (82%)
 Frame = -3

Query: 409 NGRFESARQLFEAKSDWEIVSWNSMLAGYVRKKKI 305
           NGR E A  LFE+KSDW+++SWN ++ G+VRKKK+
Sbjct: 186 NGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKL 220



 Score =  108 bits (269), Expect(2) = 1e-24
 Identities = 46/99 (46%), Positives = 73/99 (73%)
 Frame = -1

Query: 297 ARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQNGML 118
           AR LF+++PER+  SWN M++GY +N ++ +A++LF+  P ++VV+W +++SGY QNG +
Sbjct: 99  ARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYV 158

Query: 117 DKAKRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
           D+A+  FD MPEKN +SWN ++  Y   GR++ A  LFE
Sbjct: 159 DEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE 197



 Score = 30.0 bits (66), Expect(2) = 1e-24
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -3

Query: 412 QNGRFESARQLFEAKSDWEIVSWNSMLAGYVRKKK 308
           +NG  +SA  +F        VS+N+M++GY+R  K
Sbjct: 61  RNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSK 95



 Score = 95.1 bits (235), Expect(2) = 7e-23
 Identities = 46/134 (34%), Positives = 76/134 (56%), Gaps = 31/134 (23%)
 Frame = -1

Query: 309 RLFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQ 130
           RL DAR LF+ +PE++ +SWN+++SGYAQNG + EA+++F+  P +N ++W  +++ YV 
Sbjct: 126 RLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVH 185

Query: 129 NGMLDK-------------------------------AKRTFDEMPEKNVVSWNAIIVGY 43
           NG +++                               A+  FD+MP ++ +SWN +I GY
Sbjct: 186 NGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGY 245

Query: 42  TQCGRMDLARELFE 1
            Q G +  AR LF+
Sbjct: 246 AQGGGLSQARRLFD 259



 Score = 37.0 bits (84), Expect(2) = 7e-23
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -3

Query: 412 QNGRFESARQLFEAKSDWEIVSWNSMLAGYVRKKKI 305
           +N +F  AR LF+   + ++ SWN ML GYVR  ++
Sbjct: 92  RNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRL 127



 Score =  103 bits (256), Expect = 2e-20
 Identities = 46/96 (47%), Positives = 69/96 (71%)
 Frame = -1

Query: 288 LFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQNGMLDKA 109
           +FN +P R+ +S+N MISGY +N +   A+ LF+  P R++ +W  M++GYV+N  L  A
Sbjct: 71  VFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDA 130

Query: 108 KRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
           +R FD MPEK+VVSWN+++ GY Q G +D ARE+F+
Sbjct: 131 RRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFD 166



 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/134 (38%), Positives = 78/134 (58%)
 Frame = -1

Query: 405 GGLSLRDNFLRRNQIGRLFLGIQCWLGM*EKKRLFDARWLFNRIPERNEISWNTMISGYA 226
           GGLS        +    +F       G  +   L +A+  F+ +PE+NE+S+N MI+GY 
Sbjct: 249 GGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYV 308

Query: 225 QNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQNGMLDKAKRTFDEMPEKNVVSWNAIIVG 46
           Q  +M  A++LFE  P RN+ +W  M++GY Q G + +A++ FD MP+++ VSW AII G
Sbjct: 309 QTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAG 368

Query: 45  YTQCGRMDLARELF 4
           Y Q G  + A  +F
Sbjct: 369 YAQSGHYEEALNMF 382



 Score = 72.4 bits (176), Expect(2) = 1e-15
 Identities = 34/82 (41%), Positives = 53/82 (64%)
 Frame = -1

Query: 327 GM*EKKRLFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAM 148
           G  + K++  AR LF  +P RN  SWNTMI+GY Q G + +A+K F+  P R+ V+W A+
Sbjct: 306 GYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAI 365

Query: 147 VSGYVQNGMLDKAKRTFDEMPE 82
           ++GY Q+G  ++A   F E+ +
Sbjct: 366 IAGYAQSGHYEEALNMFVEIKQ 387



 Score = 35.4 bits (80), Expect(2) = 1e-15
 Identities = 15/36 (41%), Positives = 24/36 (66%)
 Frame = -3

Query: 412 QNGRFESARQLFEAKSDWEIVSWNSMLAGYVRKKKI 305
           QNG  + A+  F+   +   VS+N+M+AGYV+ KK+
Sbjct: 278 QNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKM 313



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/93 (36%), Positives = 58/93 (62%)
 Frame = -1

Query: 279 RIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQNGMLDKAKRT 100
           R+ + + + WN  IS + +NG    A  +F   P R+ V++ AM+SGY++N   + A+  
Sbjct: 43  RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102

Query: 99  FDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
           FD+MPE+++ SWN ++ GY +  R+  AR LF+
Sbjct: 103 FDQMPERDLFSWNVMLTGYVRNCRLGDARRLFD 135


>gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  156 bits (395), Expect(2) = 2e-46
 Identities = 74/109 (67%), Positives = 91/109 (83%)
 Frame = -1

Query: 327 GM*EKKRLFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAM 148
           G   KK+L DARWLF+++P R+ ISWNTMISGYAQ G + +A++LF+ SP+R+V TWTAM
Sbjct: 213 GFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAM 272

Query: 147 VSGYVQNGMLDKAKRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
           VSGYVQNGMLD+AK  FDEMPEKN VS+NA+I GY Q  +MD+ARELFE
Sbjct: 273 VSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFE 321



 Score = 54.3 bits (129), Expect(2) = 2e-46
 Identities = 21/35 (60%), Positives = 29/35 (82%)
 Frame = -3

Query: 409 NGRFESARQLFEAKSDWEIVSWNSMLAGYVRKKKI 305
           NGR E A  LFE+KSDW+++SWN ++ G+VRKKK+
Sbjct: 186 NGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKL 220



 Score =  108 bits (269), Expect(2) = 1e-24
 Identities = 46/99 (46%), Positives = 73/99 (73%)
 Frame = -1

Query: 297 ARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQNGML 118
           AR LF+++PER+  SWN M++GY +N ++ +A++LF+  P ++VV+W +++SGY QNG +
Sbjct: 99  ARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYV 158

Query: 117 DKAKRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
           D+A+  FD MPEKN +SWN ++  Y   GR++ A  LFE
Sbjct: 159 DEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFE 197



 Score = 30.0 bits (66), Expect(2) = 1e-24
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -3

Query: 412 QNGRFESARQLFEAKSDWEIVSWNSMLAGYVRKKK 308
           +NG  +SA  +F        VS+N+M++GY+R  K
Sbjct: 61  RNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSK 95



 Score = 95.1 bits (235), Expect(2) = 7e-23
 Identities = 46/134 (34%), Positives = 76/134 (56%), Gaps = 31/134 (23%)
 Frame = -1

Query: 309 RLFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQ 130
           RL DAR LF+ +PE++ +SWN+++SGYAQNG + EA+++F+  P +N ++W  +++ YV 
Sbjct: 126 RLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVH 185

Query: 129 NGMLDK-------------------------------AKRTFDEMPEKNVVSWNAIIVGY 43
           NG +++                               A+  FD+MP ++ +SWN +I GY
Sbjct: 186 NGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGY 245

Query: 42  TQCGRMDLARELFE 1
            Q G +  AR LF+
Sbjct: 246 AQGGGLSQARRLFD 259



 Score = 37.0 bits (84), Expect(2) = 7e-23
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -3

Query: 412 QNGRFESARQLFEAKSDWEIVSWNSMLAGYVRKKKI 305
           +N +F  AR LF+   + ++ SWN ML GYVR  ++
Sbjct: 92  RNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRL 127



 Score =  103 bits (256), Expect = 2e-20
 Identities = 46/96 (47%), Positives = 69/96 (71%)
 Frame = -1

Query: 288 LFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQNGMLDKA 109
           +FN +P R+ +S+N MISGY +N +   A+ LF+  P R++ +W  M++GYV+N  L  A
Sbjct: 71  VFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDA 130

Query: 108 KRTFDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
           +R FD MPEK+VVSWN+++ GY Q G +D ARE+F+
Sbjct: 131 RRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFD 166



 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/134 (38%), Positives = 78/134 (58%)
 Frame = -1

Query: 405 GGLSLRDNFLRRNQIGRLFLGIQCWLGM*EKKRLFDARWLFNRIPERNEISWNTMISGYA 226
           GGLS        +    +F       G  +   L +A+  F+ +PE+NE+S+N MI+GY 
Sbjct: 249 GGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYV 308

Query: 225 QNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQNGMLDKAKRTFDEMPEKNVVSWNAIIVG 46
           Q  +M  A++LFE  P RN+ +W  M++GY Q G + +A++ FD MP+++ VSW AII G
Sbjct: 309 QTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAG 368

Query: 45  YTQCGRMDLARELF 4
           Y Q G  + A  +F
Sbjct: 369 YAQSGHYEEALNMF 382



 Score = 72.4 bits (176), Expect(2) = 1e-15
 Identities = 34/82 (41%), Positives = 53/82 (64%)
 Frame = -1

Query: 327 GM*EKKRLFDARWLFNRIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAM 148
           G  + K++  AR LF  +P RN  SWNTMI+GY Q G + +A+K F+  P R+ V+W A+
Sbjct: 306 GYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAI 365

Query: 147 VSGYVQNGMLDKAKRTFDEMPE 82
           ++GY Q+G  ++A   F E+ +
Sbjct: 366 IAGYAQSGHYEEALNMFVEIKQ 387



 Score = 35.4 bits (80), Expect(2) = 1e-15
 Identities = 15/36 (41%), Positives = 24/36 (66%)
 Frame = -3

Query: 412 QNGRFESARQLFEAKSDWEIVSWNSMLAGYVRKKKI 305
           QNG  + A+  F+   +   VS+N+M+AGYV+ KK+
Sbjct: 278 QNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKM 313



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/93 (36%), Positives = 58/93 (62%)
 Frame = -1

Query: 279 RIPERNEISWNTMISGYAQNGQMLEAQKLFEGSPSRNVVTWTAMVSGYVQNGMLDKAKRT 100
           R+ + + + WN  IS + +NG    A  +F   P R+ V++ AM+SGY++N   + A+  
Sbjct: 43  RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102

Query: 99  FDEMPEKNVVSWNAIIVGYTQCGRMDLARELFE 1
           FD+MPE+++ SWN ++ GY +  R+  AR LF+
Sbjct: 103 FDQMPERDLFSWNVMLTGYVRNCRLGDARRLFD 135