BLASTX nr result

ID: Coptis23_contig00031295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031295
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531804.1| Root phototropism protein, putative [Ricinus...   139   3e-31
ref|XP_002323684.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29
ref|XP_002269960.2| PREDICTED: BTB/POZ domain-containing protein...   131   5e-29
emb|CBI31167.3| unnamed protein product [Vitis vinifera]              131   5e-29
ref|XP_003534629.1| PREDICTED: BTB/POZ domain-containing protein...   122   2e-26

>ref|XP_002531804.1| Root phototropism protein, putative [Ricinus communis]
           gi|223528538|gb|EEF30561.1| Root phototropism protein,
           putative [Ricinus communis]
          Length = 592

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/90 (74%), Positives = 74/90 (82%)
 Frame = +3

Query: 6   SGKIRKMVAHARDSNFSRVELRNFPGGPQIFELAAKFCYGSNFDINVANVSHLHCASSYL 185
           SGKIRKMVA A+DSN S++EL N PGGP  FELA KFCYG NF+I  ANV+HL CA+ YL
Sbjct: 52  SGKIRKMVADAKDSNISKLELHNLPGGPHTFELAMKFCYGMNFEITTANVAHLRCAAEYL 111

Query: 186 EMTEDYWEGNLITRTEAYLNDVVLQSLEKS 275
           EMTEDY E NLI RTE YLNDVV+QSLEKS
Sbjct: 112 EMTEDYREENLIERTEIYLNDVVVQSLEKS 141


>ref|XP_002323684.1| predicted protein [Populus trichocarpa] gi|222868314|gb|EEF05445.1|
           predicted protein [Populus trichocarpa]
          Length = 550

 Score =  132 bits (331), Expect = 4e-29
 Identities = 63/90 (70%), Positives = 72/90 (80%)
 Frame = +3

Query: 6   SGKIRKMVAHARDSNFSRVELRNFPGGPQIFELAAKFCYGSNFDINVANVSHLHCASSYL 185
           SGKIRKMVA A+DSN S++EL N PGGP  FELA KFCYG NF+I  ANV+HL CA+ YL
Sbjct: 29  SGKIRKMVADAKDSNISKLELCNLPGGPHTFELAMKFCYGMNFEITTANVAHLRCAAEYL 88

Query: 186 EMTEDYWEGNLITRTEAYLNDVVLQSLEKS 275
           EMTEDY E NLI RTE YLN+ V+ SLE+S
Sbjct: 89  EMTEDYREENLIARTETYLNEFVVHSLERS 118


>ref|XP_002269960.2| PREDICTED: BTB/POZ domain-containing protein At3g08570-like isoform
           1 [Vitis vinifera]
          Length = 636

 Score =  131 bits (330), Expect = 5e-29
 Identities = 63/90 (70%), Positives = 72/90 (80%)
 Frame = +3

Query: 6   SGKIRKMVAHARDSNFSRVELRNFPGGPQIFELAAKFCYGSNFDINVANVSHLHCASSYL 185
           SGKIRKMVA  +DS+ S++E  N PGGP+ FELAAKFCYG NF+IN  NV+ L CA+ YL
Sbjct: 85  SGKIRKMVADVKDSSLSKLEFLNLPGGPRAFELAAKFCYGMNFEINTGNVAQLRCAAEYL 144

Query: 186 EMTEDYWEGNLITRTEAYLNDVVLQSLEKS 275
           EMTEDY E NLITR E YLN+VV QSLEKS
Sbjct: 145 EMTEDYREENLITRAETYLNEVVTQSLEKS 174


>emb|CBI31167.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score =  131 bits (330), Expect = 5e-29
 Identities = 63/90 (70%), Positives = 72/90 (80%)
 Frame = +3

Query: 6   SGKIRKMVAHARDSNFSRVELRNFPGGPQIFELAAKFCYGSNFDINVANVSHLHCASSYL 185
           SGKIRKMVA  +DS+ S++E  N PGGP+ FELAAKFCYG NF+IN  NV+ L CA+ YL
Sbjct: 51  SGKIRKMVADVKDSSLSKLEFLNLPGGPRAFELAAKFCYGMNFEINTGNVAQLRCAAEYL 110

Query: 186 EMTEDYWEGNLITRTEAYLNDVVLQSLEKS 275
           EMTEDY E NLITR E YLN+VV QSLEKS
Sbjct: 111 EMTEDYREENLITRAETYLNEVVTQSLEKS 140


>ref|XP_003534629.1| PREDICTED: BTB/POZ domain-containing protein At3g08570-like
           [Glycine max]
          Length = 596

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/90 (66%), Positives = 70/90 (77%)
 Frame = +3

Query: 6   SGKIRKMVAHARDSNFSRVELRNFPGGPQIFELAAKFCYGSNFDINVANVSHLHCASSYL 185
           SGKIRKMVA A+ SN S +EL NFPGG Q FELA KFCYG NF+I   NV+ L CA+ YL
Sbjct: 55  SGKIRKMVAEAKGSNVSNLELLNFPGGHQTFELAMKFCYGMNFEITTFNVARLLCAAEYL 114

Query: 186 EMTEDYWEGNLITRTEAYLNDVVLQSLEKS 275
           EMTE+Y E NLI+R E YLN++V QSL+KS
Sbjct: 115 EMTEEYREQNLISRAEIYLNEIVFQSLQKS 144


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