BLASTX nr result

ID: Coptis23_contig00031294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031294
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273997.2| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal ...   145   3e-33
emb|CBI30593.3| unnamed protein product [Vitis vinifera]              132   2e-29
ref|XP_002305124.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29
ref|XP_002509448.1| trypsin domain-containing protein, putative ...   130   1e-28
emb|CAN59793.1| hypothetical protein VITISV_001901 [Vitis vinifera]   125   4e-27

>ref|XP_002273997.2| PREDICTED: LOW QUALITY PROTEIN: glyoxysomal processing protease,
           glyoxysomal-like [Vitis vinifera]
          Length = 753

 Score =  145 bits (366), Expect = 3e-33
 Identities = 81/160 (50%), Positives = 100/160 (62%), Gaps = 2/160 (1%)
 Frame = +1

Query: 1   SISVGXXXXXXXXXXXXXXLLMADIRCFAGMEGGPIFSEHAEFIGILNRPLRVIASGAEI 180
           SISVG              LLMADIRC  GMEGGP+F+EHA+ IGIL RPLR    GAEI
Sbjct: 257 SISVGSIANCYTPSPSRRSLLMADIRCLPGMEGGPVFNEHAQLIGILTRPLRQKTGGAEI 316

Query: 181 QLVIPWEAIALALSDLLQNGAPKEGVVSNIEK--INAIGNECSTNCPQSNRALNFVTKKQ 354
           QLVIPWEAIA A  DLLQ     EG + +  +  +NA+G +   +   S+   N + ++ 
Sbjct: 317 QLVIPWEAIATACCDLLQKEVQNEGEMKHYNRGNLNAVGKKYLFSGHDSDGPFNSMHQQP 376

Query: 355 DCHHLLALRIEKAIASVALVTVGEGTWASGVVLNNNGLIL 474
           DC       IEKA+AS+ LVT+ +G WASGVVLN+ GLIL
Sbjct: 377 DCCSPPLSLIEKAMASICLVTIDDGVWASGVVLNSQGLIL 416


>emb|CBI30593.3| unnamed protein product [Vitis vinifera]
          Length = 682

 Score =  132 bits (333), Expect = 2e-29
 Identities = 77/158 (48%), Positives = 90/158 (56%)
 Frame = +1

Query: 1   SISVGXXXXXXXXXXXXXXLLMADIRCFAGMEGGPIFSEHAEFIGILNRPLRVIASGAEI 180
           SISVG              LLMADIRC  GMEGGP+F+EHA+ IGIL RPLR    GAEI
Sbjct: 263 SISVGSIANCYTPSPSRRSLLMADIRCLPGMEGGPVFNEHAQLIGILTRPLRQKTGGAEI 322

Query: 181 QLVIPWEAIALALSDLLQNGAPKEGVVSNIEKINAIGNECSTNCPQSNRALNFVTKKQDC 360
           QLVIPWEAIA A  DLLQ     EG + +  + N                   +  + DC
Sbjct: 323 QLVIPWEAIATACCDLLQKEVQNEGEMKHYNRGN-------------------LNAQPDC 363

Query: 361 HHLLALRIEKAIASVALVTVGEGTWASGVVLNNNGLIL 474
                  IEKA+AS+ LVT+ +G WASGVVLN+ GLIL
Sbjct: 364 CSPPLSLIEKAMASICLVTIDDGVWASGVVLNSQGLIL 401


>ref|XP_002305124.1| predicted protein [Populus trichocarpa] gi|222848088|gb|EEE85635.1|
           predicted protein [Populus trichocarpa]
          Length = 752

 Score =  131 bits (330), Expect = 5e-29
 Identities = 82/166 (49%), Positives = 103/166 (62%), Gaps = 8/166 (4%)
 Frame = +1

Query: 1   SISVGXXXXXXXXXXXXXXLLMADIRCFAGMEGGPIFSEHAEFIGILNRPLRVIASGAEI 180
           S+SVG              LLMADIRC  GMEG P+F E++ FIGIL RPLR  +SGAEI
Sbjct: 265 SLSVGSIANCYPPRSSDISLLMADIRCLPGMEGSPVFCENSNFIGILIRPLRQKSSGAEI 324

Query: 181 QLVIPWEAIALALSDLL----QNGAPKEGVVSNIEKINAIGNECSTNCPQSNRALNFVTK 348
           QLVIPWEAIALA SDLL    QN   ++G+  N E +NA+GN  S++         F  K
Sbjct: 325 QLVIPWEAIALACSDLLLKEPQNA--EKGIHINKENLNAVGNAYSSSSDGP-----FPLK 377

Query: 349 KQDCHHLLALR----IEKAIASVALVTVGEGTWASGVVLNNNGLIL 474
            +  HH+        +EKA+AS+ L+T+ E  WASGV+LN+ GLIL
Sbjct: 378 HE--HHISYCSSPPPVEKAMASICLITIDELVWASGVLLNDQGLIL 421


>ref|XP_002509448.1| trypsin domain-containing protein, putative [Ricinus communis]
           gi|223549347|gb|EEF50835.1| trypsin domain-containing
           protein, putative [Ricinus communis]
          Length = 729

 Score =  130 bits (327), Expect = 1e-28
 Identities = 76/162 (46%), Positives = 99/162 (61%), Gaps = 4/162 (2%)
 Frame = +1

Query: 1   SISVGXXXXXXXXXXXXXXLLMADIRCFAGMEGGPIFSEHAEFIGILNRPLRVIASGAEI 180
           S+S+G              L+MADIRC  GMEG P F E  +FIGIL RPLR  ++GAEI
Sbjct: 242 SLSMGSVANCYPARSSNVSLVMADIRCLPGMEGAPAFGECGDFIGILTRPLRQKSTGAEI 301

Query: 181 QLVIPWEAIALALSDLL----QNGAPKEGVVSNIEKINAIGNECSTNCPQSNRALNFVTK 348
           QLVIPWEAIA A  DLL    QN   +EG+  N E +NA+ N  S    +S+   ++  +
Sbjct: 302 QLVIPWEAIATACGDLLLKEPQNA--EEGIAINKENLNAVENAYS---HESDGPFSYKYE 356

Query: 349 KQDCHHLLALRIEKAIASVALVTVGEGTWASGVVLNNNGLIL 474
             + H    L +EK +ASV L+T+ EG WASGV+LN+ GL+L
Sbjct: 357 HFNSHCSSTLPVEKVMASVCLITIDEGIWASGVLLNDQGLVL 398


>emb|CAN59793.1| hypothetical protein VITISV_001901 [Vitis vinifera]
          Length = 840

 Score =  125 bits (314), Expect = 4e-27
 Identities = 67/132 (50%), Positives = 87/132 (65%), Gaps = 2/132 (1%)
 Frame = +1

Query: 85  AGMEGGPIFSEHAEFIGILNRPLRVIASGAEIQLVIPWEAIALALSDLLQNGAPKEGVVS 264
           +GMEGGP+F+EHA+ IGIL RPLR    GAEIQLVIPWEAI  A  DLLQ     EG + 
Sbjct: 383 SGMEGGPVFNEHAQLIGILTRPLRQKTGGAEIQLVIPWEAIXTACCDLLQKEVQNEGEMK 442

Query: 265 NIEK--INAIGNECSTNCPQSNRALNFVTKKQDCHHLLALRIEKAIASVALVTVGEGTWA 438
           +  +  +NA+G +   +   S+   N + ++ DC       IEKA+AS+ LVT+ +G WA
Sbjct: 443 HYNRGNLNAVGKKYLFSGHDSDGPFNSMHQQPDCCSPPLSLIEKAMASICLVTIDDGVWA 502

Query: 439 SGVVLNNNGLIL 474
           SGVVLN+ GLIL
Sbjct: 503 SGVVLNSQGLIL 514


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