BLASTX nr result

ID: Coptis23_contig00031282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00031282
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCM04436.1| predicted protein [Fibroporia radiculosa]              54   1e-05

>emb|CCM04436.1| predicted protein [Fibroporia radiculosa]
          Length = 1623

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +3

Query: 84   QSPPSKKIEPPIQLTPIRDRSDH-HLDNNQHHDRQHTHPNHNQPITTYPSTQHHHNRTSP 260
            Q PP  +  PP Q +P +    H H   +QHH  QH H + +Q        QHHH+   P
Sbjct: 949  QPPPFHRHSPPRQHSPQQHHQHHQHQHQHQHHQHQHQHQHQHQH-------QHHHSPPRP 1001

Query: 261  SSPPIVHLHLTVAPPSN 311
            SSPP +  +  + PP N
Sbjct: 1002 SSPPKLSWNPAIEPPPN 1018


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